Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is ttuD [H]

Identifier: 83311387

GI number: 83311387

Start: 2489718

End: 2490821

Strand: Reverse

Name: ttuD [H]

Synonym: amb2288

Alternate gene names: 83311387

Gene position: 2490821-2489718 (Counterclockwise)

Preceding gene: 83311389

Following gene: 83311386

Centisome position: 50.15

GC content: 71.01

Gene sequence:

>1104_bases
ATGGCCCGCGCCGTGGAGGACCATTGGCAAGGGCCGCTGTCCGGCCTGGTGGTCACCCGCTATGGCCATTGCGTCCCCAC
CCGGCGAATCGAGGTGGTGGAGGCCGCCCATCCGGTCCCCGACGCGGCGGGCGAGCACGCCGCCGGCCGCATGATGGACC
TGCTGGCCGGCGTGGGAGCGGACGATCTGGTGCTGTGCCTGATCTCGGGCGGCGGTTCGGCCCTGCTGGCCCGCCCGGCC
GAGGGCATCACCCTGGCCGAGAAGCAGGCCCTGACCGGGGCCTTGCTGCGCTCGGGCGCCGCCATCGGCGAAATCAATTG
CGTGCGCAAGCACCTCTCGGCGGTCAAGGGCGGCCGCCTCGCCGCCCTGGCCGCCCCAGCGCGGCTGGTGACCCTGGCCA
TTTCCGACGTGCCCGGCGACAACCCGTCGGTGATCGCCTCGGGCCCCACGGTGGCCGATCCCACCACCCTGGCCGAGGCC
CGCGCCGTGCTGGCCCGCTATGGCATCGCGCCGCCGCCCGCCATTGCCGCCCGGCTGAACGATCCGGCCGCCGAGACCCC
GAAGAGCCTTCCCCCTGGCGAGTACCGCCTGATCGCCACGCCGCAGCGCTCGCTGGAGGCCGCCGCCCTGGTGGCGGCGC
GGGCTGGTCTGATGCCGCTGCTGCTGGGCGATGCCCTGGAGGGCGAAGCCCGCGAGATGGCCAGGGTGATGGCCGGAATC
GTCAAATCCATCCGCGCCCACCAGCAGCCGGTGCCCATGCCGGCGGTGATCCTGTCCGGCGGCGAAGCGACCGTCACCAT
CCGGGGCCAGGGCAAGGGCGGCCCCAATGCCGAATTCGCCCTGGCCTTGGCGCTGGCGTTGAAGGACACCCAGGGCGTGG
AGGCCATCGCCTGCGACACCGACGGCATCGACGGCTCCGAGGACAATGCCGGCGCGGTCATCACGCCCGACACCGCAGAG
AGGGCGCGGGCGTTGGGACTTAACCTTGAGTCTTACCTTAACCAGAACGATTCATACGGATTTTTCAATACGTTGGGCGA
CCTTGTTAAGTGCGGGCCGACCCTGACCAACGTCAACGACTTCCGGGCGGTGCTGGTGCGATGA

Upstream 100 bases:

>100_bases
GGTCGAAGCGGCCAAGCCTTCCGCCTGCCTGCCGCCCGCCCTTCCCGCTCCGCCGCCCGGCCGCACCCTGGTGATCGGCG
CCGGCAAGGCCGCCGCCGCC

Downstream 100 bases:

>100_bases
CCCTGCCTTTCGACACGGCCCTGGCGCTGAAACTGGTGCCGCTTTACCTGCTGATGGGCATCGGCTTTCTGCTGGGCCGG
TTTTGCGAGGTCAAGGGACA

Product: putative hydroxypyruvate reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MARAVEDHWQGPLSGLVVTRYGHCVPTRRIEVVEAAHPVPDAAGEHAAGRMMDLLAGVGADDLVLCLISGGGSALLARPA
EGITLAEKQALTGALLRSGAAIGEINCVRKHLSAVKGGRLAALAAPARLVTLAISDVPGDNPSVIASGPTVADPTTLAEA
RAVLARYGIAPPPAIAARLNDPAAETPKSLPPGEYRLIATPQRSLEAAALVAARAGLMPLLLGDALEGEAREMARVMAGI
VKSIRAHQQPVPMPAVILSGGEATVTIRGQGKGGPNAEFALALALALKDTQGVEAIACDTDGIDGSEDNAGAVITPDTAE
RARALGLNLESYLNQNDSYGFFNTLGDLVKCGPTLTNVNDFRAVLVR

Sequences:

>Translated_367_residues
MARAVEDHWQGPLSGLVVTRYGHCVPTRRIEVVEAAHPVPDAAGEHAAGRMMDLLAGVGADDLVLCLISGGGSALLARPA
EGITLAEKQALTGALLRSGAAIGEINCVRKHLSAVKGGRLAALAAPARLVTLAISDVPGDNPSVIASGPTVADPTTLAEA
RAVLARYGIAPPPAIAARLNDPAAETPKSLPPGEYRLIATPQRSLEAAALVAARAGLMPLLLGDALEGEAREMARVMAGI
VKSIRAHQQPVPMPAVILSGGEATVTIRGQGKGGPNAEFALALALALKDTQGVEAIACDTDGIDGSEDNAGAVITPDTAE
RARALGLNLESYLNQNDSYGFFNTLGDLVKCGPTLTNVNDFRAVLVR
>Mature_366_residues
ARAVEDHWQGPLSGLVVTRYGHCVPTRRIEVVEAAHPVPDAAGEHAAGRMMDLLAGVGADDLVLCLISGGGSALLARPAE
GITLAEKQALTGALLRSGAAIGEINCVRKHLSAVKGGRLAALAAPARLVTLAISDVPGDNPSVIASGPTVADPTTLAEAR
AVLARYGIAPPPAIAARLNDPAAETPKSLPPGEYRLIATPQRSLEAAALVAARAGLMPLLLGDALEGEAREMARVMAGIV
KSIRAHQQPVPMPAVILSGGEATVTIRGQGKGGPNAEFALALALALKDTQGVEAIACDTDGIDGSEDNAGAVITPDTAER
ARALGLNLESYLNQNDSYGFFNTLGDLVKCGPTLTNVNDFRAVLVR

Specific function: Degrades an unidentified toxic product from the first step of tartrate degradation [H]

COG id: COG2379

COG function: function code G; Putative glycerate kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI31543063, Length=390, Percent_Identity=35.3846153846154, Blast_Score=172, Evalue=4e-43,
Organism=Caenorhabditis elegans, GI193205461, Length=351, Percent_Identity=30.4843304843305, Blast_Score=122, Evalue=4e-28,
Organism=Drosophila melanogaster, GI19920578, Length=376, Percent_Identity=31.1170212765957, Blast_Score=135, Evalue=4e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007835 [H]

Pfam domain/function: PF05161 MOFRL [H]

EC number: =1.1.1.81 [H]

Molecular weight: Translated: 37627; Mature: 37495

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARAVEDHWQGPLSGLVVTRYGHCVPTRRIEVVEAAHPVPDAAGEHAAGRMMDLLAGVGA
CCCCCCHHCCCCCCCEEEEECCCCCCCCCEEEHHHCCCCCCCCCCHHHHHHHHHHHCCCC
DDLVLCLISGGGSALLARPAEGITLAEKQALTGALLRSGAAIGEINCVRKHLSAVKGGRL
CCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCE
AALAAPARLVTLAISDVPGDNPSVIASGPTVADPTTLAEARAVLARYGIAPPPAIAARLN
EEECCCCEEEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCC
DPAAETPKSLPPGEYRLIATPQRSLEAAALVAARAGLMPLLLGDALEGEAREMARVMAGI
CCHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHH
VKSIRAHQQPVPMPAVILSGGEATVTIRGQGKGGPNAEFALALALALKDTQGVEAIACDT
HHHHHHCCCCCCCCEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEECC
DGIDGSEDNAGAVITPDTAERARALGLNLESYLNQNDSYGFFNTLGDLVKCGPTLTNVND
CCCCCCCCCCCEEECCCHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCH
FRAVLVR
HEEEECC
>Mature Secondary Structure 
ARAVEDHWQGPLSGLVVTRYGHCVPTRRIEVVEAAHPVPDAAGEHAAGRMMDLLAGVGA
CCCCCHHCCCCCCCEEEEECCCCCCCCCEEEHHHCCCCCCCCCCHHHHHHHHHHHCCCC
DDLVLCLISGGGSALLARPAEGITLAEKQALTGALLRSGAAIGEINCVRKHLSAVKGGRL
CCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCE
AALAAPARLVTLAISDVPGDNPSVIASGPTVADPTTLAEARAVLARYGIAPPPAIAARLN
EEECCCCEEEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCC
DPAAETPKSLPPGEYRLIATPQRSLEAAALVAARAGLMPLLLGDALEGEAREMARVMAGI
CCHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHH
VKSIRAHQQPVPMPAVILSGGEATVTIRGQGKGGPNAEFALALALALKDTQGVEAIACDT
HHHHHHCCCCCCCCEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEECC
DGIDGSEDNAGAVITPDTAERARALGLNLESYLNQNDSYGFFNTLGDLVKCGPTLTNVND
CCCCCCCCCCCEEECCCHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCH
FRAVLVR
HEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7592429 [H]