| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is menB [H]
Identifier: 83311242
GI number: 83311242
Start: 2319337
End: 2320470
Strand: Reverse
Name: menB [H]
Synonym: amb2143
Alternate gene names: 83311242
Gene position: 2320470-2319337 (Counterclockwise)
Preceding gene: 83311243
Following gene: 83311241
Centisome position: 46.72
GC content: 64.99
Gene sequence:
>1134_bases ATGAAGAAGGAAACCGCGGCCATCGTCGATTCAACGGCGCCCGCCCACCTCAACGATCACAATCTGGTCCCCACCACCGT GGTCCCCGGCGTTCTGTACGAGAAGCGCCCGGCCAAGCGGGCCGACGGCACCGTGGCCGAGGGCCTGTATAACGCCTGGA TCACGCTGGACAACCAGAAGCAGTACAATTCCTACACCACCGACATGGTGAAGGGCGTCATCATGGCGTTCCGCGACGCC TCCAACGCCCGCGACGTGTCGTCGGTGGTGTTTACCGGCGCCGGCGACAAGGCGTTCTGCACCGGCGGCAACACCAAGGA ATATGCCGAGTACTACGCCGGCAACCCGCAGGAATACCGCCAGTACATGCGGCTGTTCAACGACATGGTCTCGGCCATCC TGGGCTGCGACAAGCCGGTGATCTGCCGCGTCAACGGCATGCGCATCGGCGGCGGCCAGGAAATCGGCATGGCCGCCGAC TTCTCGGTGGCCCAGGATCTGGCCAAGTTCGGTCAGGCCGGCCCCAAGCACGGCTCGGCCCCCATCGGCGGCGCCACCGA CTTCCTGCCCGTCATGATCGGCTGCGAGCAGGCCATGGTGTCGGGTTCGCTCTGCGAGCCCTGGTCGGCCCACAAGGCCT ATCGCACCGGCATCATCATGGATCTGGTCCCGGCCCTGAAGGTCGACGGCAAGTTCGTCGCCAACCCCCTGGTGATCACC GACCGCTATCTCGACGAGTTCGGCAAGATCGTCCACGGCGAGTCCAAGACCGGCGCCGAGCTGGCAGCGGGCAAGGAGCT GCTGAAGAAGGGCACCATCGACCTGTCCCTGCTGGACGCCAAGGTCGAGGAGATCTGCGCCAAGATCCTGCACACCTTCC CGGATTGCTTCACCAAGACGATCCAGGAACTGCGCAAGCCCAAGCTGAACGCCTGGAACGCCAACAAGGAAAACAGCCGC GACTGGCTGGGCCTCAACATGATGACCGAGGCCCGCACCGGCTTCCGCGCCTTCAACGAGGGTCCCAAGGAAGACCGCGA GATCGACTTCGTGGCGCTCCGCCAGGCCCTGGCCAAGGGTGCCCCGTGGACGCCCGAGCTGATCGAGTCCCTGATCCCCA AGGCGGGCCACTGA
Upstream 100 bases:
>100_bases CAACGACACGTTCGCCGCCGTGCACGACCACAAGCTGTCGCGCCGCGCCGTCCTGTGCCCCAACGCCTAAAAGAAATTCA AGAGAGGGAGAGTCCTGGTC
Downstream 100 bases:
>100_bases CATGGCCGAAGGCATCTCCAACTGCCTGAAGGTCTGGAAGGACCGCGAGGGGAAGCTGCTGCGGCTGCGCCTCTCGCGGC CCAAGGCCAACATCGTCGAC
Product: dihydroxynaphthoic acid synthase
Products: NA
Alternate protein names: DHNA-CoA synthase [H]
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MKKETAAIVDSTAPAHLNDHNLVPTTVVPGVLYEKRPAKRADGTVAEGLYNAWITLDNQKQYNSYTTDMVKGVIMAFRDA SNARDVSSVVFTGAGDKAFCTGGNTKEYAEYYAGNPQEYRQYMRLFNDMVSAILGCDKPVICRVNGMRIGGGQEIGMAAD FSVAQDLAKFGQAGPKHGSAPIGGATDFLPVMIGCEQAMVSGSLCEPWSAHKAYRTGIIMDLVPALKVDGKFVANPLVIT DRYLDEFGKIVHGESKTGAELAAGKELLKKGTIDLSLLDAKVEEICAKILHTFPDCFTKTIQELRKPKLNAWNANKENSR DWLGLNMMTEARTGFRAFNEGPKEDREIDFVALRQALAKGAPWTPELIESLIPKAGH
Sequences:
>Translated_377_residues MKKETAAIVDSTAPAHLNDHNLVPTTVVPGVLYEKRPAKRADGTVAEGLYNAWITLDNQKQYNSYTTDMVKGVIMAFRDA SNARDVSSVVFTGAGDKAFCTGGNTKEYAEYYAGNPQEYRQYMRLFNDMVSAILGCDKPVICRVNGMRIGGGQEIGMAAD FSVAQDLAKFGQAGPKHGSAPIGGATDFLPVMIGCEQAMVSGSLCEPWSAHKAYRTGIIMDLVPALKVDGKFVANPLVIT DRYLDEFGKIVHGESKTGAELAAGKELLKKGTIDLSLLDAKVEEICAKILHTFPDCFTKTIQELRKPKLNAWNANKENSR DWLGLNMMTEARTGFRAFNEGPKEDREIDFVALRQALAKGAPWTPELIESLIPKAGH >Mature_377_residues MKKETAAIVDSTAPAHLNDHNLVPTTVVPGVLYEKRPAKRADGTVAEGLYNAWITLDNQKQYNSYTTDMVKGVIMAFRDA SNARDVSSVVFTGAGDKAFCTGGNTKEYAEYYAGNPQEYRQYMRLFNDMVSAILGCDKPVICRVNGMRIGGGQEIGMAAD FSVAQDLAKFGQAGPKHGSAPIGGATDFLPVMIGCEQAMVSGSLCEPWSAHKAYRTGIIMDLVPALKVDGKFVANPLVIT DRYLDEFGKIVHGESKTGAELAAGKELLKKGTIDLSLLDAKVEEICAKILHTFPDCFTKTIQELRKPKLNAWNANKENSR DWLGLNMMTEARTGFRAFNEGPKEDREIDFVALRQALAKGAPWTPELIESLIPKAGH
Specific function: Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) [H]
COG id: COG0447
COG function: function code H; Dihydroxynaphthoic acid synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Escherichia coli, GI1788597, Length=173, Percent_Identity=33.5260115606936, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI221142681, Length=180, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17549921, Length=191, Percent_Identity=28.7958115183246, Blast_Score=75, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17535521, Length=175, Percent_Identity=24.5714285714286, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI20129971, Length=189, Percent_Identity=32.2751322751323, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24653477, Length=189, Percent_Identity=32.2751322751323, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 - InterPro: IPR010198 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.1.3.36 [H]
Molecular weight: Translated: 41114; Mature: 41114
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKETAAIVDSTAPAHLNDHNLVPTTVVPGVLYEKRPAKRADGTVAEGLYNAWITLDNQK CCCCHHHHHCCCCCCCCCCCCCCCHHHCCCHHHCCCCCCCCCCHHHHHHHEEEEEECCCH QYNSYTTDMVKGVIMAFRDASNARDVSSVVFTGAGDKAFCTGGNTKEYAEYYAGNPQEYR HHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEECCCCCEEECCCCHHHHHHHHCCCHHHHH QYMRLFNDMVSAILGCDKPVICRVNGMRIGGGQEIGMAADFSVAQDLAKFGQAGPKHGSA HHHHHHHHHHHHHHCCCCCEEEEECCEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC PIGGATDFLPVMIGCEQAMVSGSLCEPWSAHKAYRTGIIMDLVPALKVDGKFVANPLVIT CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEH DRYLDEFGKIVHGESKTGAELAAGKELLKKGTIDLSLLDAKVEEICAKILHTFPDCFTKT HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IQELRKPKLNAWNANKENSRDWLGLNMMTEARTGFRAFNEGPKEDREIDFVALRQALAKG HHHHHCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC APWTPELIESLIPKAGH CCCCHHHHHHHCCCCCC >Mature Secondary Structure MKKETAAIVDSTAPAHLNDHNLVPTTVVPGVLYEKRPAKRADGTVAEGLYNAWITLDNQK CCCCHHHHHCCCCCCCCCCCCCCCHHHCCCHHHCCCCCCCCCCHHHHHHHEEEEEECCCH QYNSYTTDMVKGVIMAFRDASNARDVSSVVFTGAGDKAFCTGGNTKEYAEYYAGNPQEYR HHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEECCCCCEEECCCCHHHHHHHHCCCHHHHH QYMRLFNDMVSAILGCDKPVICRVNGMRIGGGQEIGMAADFSVAQDLAKFGQAGPKHGSA HHHHHHHHHHHHHHCCCCCEEEEECCEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC PIGGATDFLPVMIGCEQAMVSGSLCEPWSAHKAYRTGIIMDLVPALKVDGKFVANPLVIT CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEH DRYLDEFGKIVHGESKTGAELAAGKELLKKGTIDLSLLDAKVEEICAKILHTFPDCFTKT HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IQELRKPKLNAWNANKENSRDWLGLNMMTEARTGFRAFNEGPKEDREIDFVALRQALAKG HHHHHCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC APWTPELIESLIPKAGH CCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1629163; 8566759; 9387221; 9384377 [H]