| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is dch [H]
Identifier: 83311241
GI number: 83311241
Start: 2318556
End: 2319335
Strand: Reverse
Name: dch [H]
Synonym: amb2142
Alternate gene names: 83311241
Gene position: 2319335-2318556 (Counterclockwise)
Preceding gene: 83311242
Following gene: 83311240
Centisome position: 46.69
GC content: 68.33
Gene sequence:
>780_bases ATGGCCGAAGGCATCTCCAACTGCCTGAAGGTCTGGAAGGACCGCGAGGGGAAGCTGCTGCGGCTGCGCCTCTCGCGGCC CAAGGCCAACATCGTCGACGCCGAGATGATCGCGGCGCTGAGCGCGGCCCTGGGCGACGCCCATGAGGATTCCGCGCTCC GCGCCGTGCTGATCGACCACGAAGGGCCGCATTTCAGCTTCGGCGCCTCGGTGGCCGAGCACATGCCCGACCAGTGCGCC GCCATGCTGGCCAGCCTGCACAAGCTGGTCATCGCCATGGTCGACTTCCCCCTGCCCATCCTGGTCGCCGTGCGCGGCCA GTGCTTAGGCGGCGGGCTCGAAGTCGCCCTGGCCGGACACATGATGTTCGTCTCGCCCGACGCCAAGCTGGGCCAGCCGG AGATCGTGCTGGGGGTGTTCGCCCCCGCCGCCTCGTGCCTGCTGCCCGAGCGCATGCCCCGGGTGGCGGCCGAGGACCTG CTCTATTCCGGCCGTTCCATCGACGGCGCCGAGGCCGCCCGCCTCGGCATCGCCAACGCCGTGGTGGACGACCCGGAAAA TGCCGCCCTGGCCTGGTTCGACAACGGCCCGGCCAAGCATTCGGCGGCAAGCCTGCGTTTCGCGGTCAAGGCCGCCCGTC TCGGCATGAACGAGCGGGTCAAGGCCAAGATCGCCGAAGTTGAAGCCCTTTACCTCAACGGCCTGATGGCCACCCACGAC GCAGTCGAGGGTTTGAACGCCTTTCTCGAAAAGAGGCCGGCACTTTGGGAGGACCGATAG
Upstream 100 bases:
>100_bases CGCGAGATCGACTTCGTGGCGCTCCGCCAGGCCCTGGCCAAGGGTGCCCCGTGGACGCCCGAGCTGATCGAGTCCCTGAT CCCCAAGGCGGGCCACTGAC
Downstream 100 bases:
>100_bases GATGTCTGGAAAGAATAAAAGCGTCGCCGACATCATGGCCGTGTGCCAGGAGATGTTCGAAGACCTGAACTTCACCTATG CTCGCAAGTGGAAGGACGCC
Product: Cyclohexa-1,5-dienecarbonyl-CoA hydratase
Products: NA
Alternate protein names: Cyclohexa-1,5-diene-1-carboxyl-CoA hydratase; Dienoyl-CoA hydratase [H]
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MAEGISNCLKVWKDREGKLLRLRLSRPKANIVDAEMIAALSAALGDAHEDSALRAVLIDHEGPHFSFGASVAEHMPDQCA AMLASLHKLVIAMVDFPLPILVAVRGQCLGGGLEVALAGHMMFVSPDAKLGQPEIVLGVFAPAASCLLPERMPRVAAEDL LYSGRSIDGAEAARLGIANAVVDDPENAALAWFDNGPAKHSAASLRFAVKAARLGMNERVKAKIAEVEALYLNGLMATHD AVEGLNAFLEKRPALWEDR
Sequences:
>Translated_259_residues MAEGISNCLKVWKDREGKLLRLRLSRPKANIVDAEMIAALSAALGDAHEDSALRAVLIDHEGPHFSFGASVAEHMPDQCA AMLASLHKLVIAMVDFPLPILVAVRGQCLGGGLEVALAGHMMFVSPDAKLGQPEIVLGVFAPAASCLLPERMPRVAAEDL LYSGRSIDGAEAARLGIANAVVDDPENAALAWFDNGPAKHSAASLRFAVKAARLGMNERVKAKIAEVEALYLNGLMATHD AVEGLNAFLEKRPALWEDR >Mature_258_residues AEGISNCLKVWKDREGKLLRLRLSRPKANIVDAEMIAALSAALGDAHEDSALRAVLIDHEGPHFSFGASVAEHMPDQCAA MLASLHKLVIAMVDFPLPILVAVRGQCLGGGLEVALAGHMMFVSPDAKLGQPEIVLGVFAPAASCLLPERMPRVAAEDLL YSGRSIDGAEAARLGIANAVVDDPENAALAWFDNGPAKHSAASLRFAVKAARLGMNERVKAKIAEVEALYLNGLMATHDA VEGLNAFLEKRPALWEDR
Specific function: Catalyzes the hydration of cyclohexa-1,5-diene-1- carboxyl-CoA [H]
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI68989263, Length=173, Percent_Identity=31.2138728323699, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI31542718, Length=241, Percent_Identity=24.4813278008299, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI194097323, Length=251, Percent_Identity=25.4980079681275, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI20127408, Length=181, Percent_Identity=28.1767955801105, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI221142681, Length=262, Percent_Identity=27.4809160305344, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI1787659, Length=252, Percent_Identity=28.968253968254, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1790281, Length=163, Percent_Identity=27.6073619631902, Blast_Score=71, Evalue=5e-14, Organism=Escherichia coli, GI1788682, Length=173, Percent_Identity=29.4797687861272, Blast_Score=67, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17554946, Length=253, Percent_Identity=27.2727272727273, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17558304, Length=185, Percent_Identity=25.9459459459459, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17540306, Length=243, Percent_Identity=25.1028806584362, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI25145438, Length=243, Percent_Identity=25.9259259259259, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24653139, Length=256, Percent_Identity=29.6875, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI20129971, Length=248, Percent_Identity=27.4193548387097, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24653477, Length=248, Percent_Identity=27.4193548387097, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 - InterPro: IPR017602 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.100 [H]
Molecular weight: Translated: 27601; Mature: 27470
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEGISNCLKVWKDREGKLLRLRLSRPKANIVDAEMIAALSAALGDAHEDSALRAVLIDH CCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEC EGPHFSFGASVAEHMPDQCAAMLASLHKLVIAMVDFPLPILVAVRGQCLGGGLEVALAGH CCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHCCCCEEEEEECE MMFVSPDAKLGQPEIVLGVFAPAASCLLPERMPRVAAEDLLYSGRSIDGAEAARLGIANA EEEECCCCCCCCCCEEEEEHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH VVDDPENAALAWFDNGPAKHSAASLRFAVKAARLGMNERVKAKIAEVEALYLNGLMATHD HHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHH AVEGLNAFLEKRPALWEDR HHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AEGISNCLKVWKDREGKLLRLRLSRPKANIVDAEMIAALSAALGDAHEDSALRAVLIDH CCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEC EGPHFSFGASVAEHMPDQCAAMLASLHKLVIAMVDFPLPILVAVRGQCLGGGLEVALAGH CCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHCCCCEEEEEECE MMFVSPDAKLGQPEIVLGVFAPAASCLLPERMPRVAAEDLLYSGRSIDGAEAARLGIANA EEEECCCCCCCCCCEEEEEHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH VVDDPENAALAWFDNGPAKHSAASLRFAVKAARLGMNERVKAKIAEVEALYLNGLMATHD HHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHH AVEGLNAFLEKRPALWEDR HHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9746358; 9738901 [H]