Click here to switch to the map view.

The map label for this gene is samA [H]

Identifier: 83311166

GI number: 83311166

Start: 2247219

End: 2247689

Strand: Reverse

Name: samA [H]

Synonym: amb2067

Alternate gene names: 83311166

Gene position: 2247689-2247219 (Counterclockwise)

Preceding gene: 83311172

Following gene: 83311165

Centisome position: 45.25

GC content: 60.72

Gene sequence:

>471_bases
ATGTTCGCACCTAGCCCAAACGCTCCATTGCCTCCCGGCACCTGTCAGGCATCTTCTCGTGGCTTCGCTCCATTGGAAGC
CACAGCACCGATCTATTCCGCCCTGGTGGCTGCCGGATTTCCCTCCCCCGCCGACGACCACCTGGAGGGCAAGCTCGATC
TCCACGAATTGATGGTGAAAAGACCGGCGGCAACCTTCTTCTGTCGGGCCGATGGCGATTCCATGACCGGTGCAGGCATC
CATAGTGGTGACCTGCTGGTGGTGGATCGTTCGGTTCAGCCCCACGACGGCGACATCGTTGTGGCGACCCTGGACGGTGG
CTTGACGGTGAAGACCTTGCGGAAGACCGAGGATGGGTGGGAATTGGCCTCGGCCAATCCGGACTACCCCAGCTTCTCCG
TCGATCCTGATGATGGCGTCCAAATATGGGGCGTCGTCACCTTCTCCGTCTCGGCCTTAGCCAAACGGTGA

Upstream 100 bases:

>100_bases
TCGGGACCTTCGAGGATCGTCGGCGAATACCCGAAAATGATCGGAAATTTGGCGTTGGAAGCGTTGATCAACCCCACCGA
TCCGAAGTAATGTTCTTATC

Downstream 100 bases:

>100_bases
TGGGCGATGGCGGTCTACGCCCTGGTGGACTGCAACAATTTTTACGTCTCTTGCGAACGGGCGTTCAATCCTGCCCTTGA
AGGCAAGCCGGTCATCGTCA

Product: SOS-response transcriptional repressors

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MFAPSPNAPLPPGTCQASSRGFAPLEATAPIYSALVAAGFPSPADDHLEGKLDLHELMVKRPAATFFCRADGDSMTGAGI
HSGDLLVVDRSVQPHDGDIVVATLDGGLTVKTLRKTEDGWELASANPDYPSFSVDPDDGVQIWGVVTFSVSALAKR

Sequences:

>Translated_156_residues
MFAPSPNAPLPPGTCQASSRGFAPLEATAPIYSALVAAGFPSPADDHLEGKLDLHELMVKRPAATFFCRADGDSMTGAGI
HSGDLLVVDRSVQPHDGDIVVATLDGGLTVKTLRKTEDGWELASANPDYPSFSVDPDDGVQIWGVVTFSVSALAKR
>Mature_156_residues
MFAPSPNAPLPPGTCQASSRGFAPLEATAPIYSALVAAGFPSPADDHLEGKLDLHELMVKRPAATFFCRADGDSMTGAGI
HSGDLLVVDRSVQPHDGDIVVATLDGGLTVKTLRKTEDGWELASANPDYPSFSVDPDDGVQIWGVVTFSVSALAKR

Specific function: Involved in UV protection and mutation [H]

COG id: COG1974

COG function: function code KT; SOS-response transcriptional repressors (RecA-mediated autopeptidases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S24 family [H]

Homologues:

Organism=Escherichia coli, GI1787431, Length=127, Percent_Identity=41.7322834645669, Blast_Score=108, Evalue=1e-25,
Organism=Escherichia coli, GI1790476, Length=121, Percent_Identity=37.1900826446281, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006197
- InterPro:   IPR019759
- InterPro:   IPR015927
- InterPro:   IPR011056 [H]

Pfam domain/function: PF00717 Peptidase_S24 [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 16334; Mature: 16334

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAPSPNAPLPPGTCQASSRGFAPLEATAPIYSALVAAGFPSPADDHLEGKLDLHELMVK
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
RPAATFFCRADGDSMTGAGIHSGDLLVVDRSVQPHDGDIVVATLDGGLTVKTLRKTEDGW
CCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCC
ELASANPDYPSFSVDPDDGVQIWGVVTFSVSALAKR
EECCCCCCCCCCCCCCCCCEEEEEEEEEEHHHHHCC
>Mature Secondary Structure
MFAPSPNAPLPPGTCQASSRGFAPLEATAPIYSALVAAGFPSPADDHLEGKLDLHELMVK
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
RPAATFFCRADGDSMTGAGIHSGDLLVVDRSVQPHDGDIVVATLDGGLTVKTLRKTEDGW
CCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCC
ELASANPDYPSFSVDPDDGVQIWGVVTFSVSALAKR
EECCCCCCCCCCCCCCCCCEEEEEEEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1991707; 11677609 [H]