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The map label for this gene is 83311172

Identifier: 83311172

GI number: 83311172

Start: 2252243

End: 2253163

Strand: Reverse

Name: 83311172

Synonym: amb2073

Alternate gene names: NA

Gene position: 2253163-2252243 (Counterclockwise)

Preceding gene: 83311173

Following gene: 83311166

Centisome position: 45.36

GC content: 56.57

Gene sequence:

>921_bases
GTGTCGCCTGACGAAGAGGAGCGTGGAATGCAGGAGATGGGTGATCACGAGAAGATGGCTGTGGCGTTGGAGGCCACCGG
CCAGTATCGCGTCCTTCGTAAATTGATCCCCCGCCAGAACCTTGTTCCGCACGATGGTTCCAAGACCCGACTCGGTATTT
TCATCGATCTTGAAACCACCGGACTGGACCCGGCCAAGGACGAGATCATCGAGTTGGCAATGGTCCCATTTGTCTATGGG
CTGGATGGTCGGATTTTCGAAATCCAGGATGCATTCCAAGGTCTGAGGCAGCCTTCAAATCCAATCCCAGCGGAAATCAC
CAAGCTGACTGGCATCACCGATGAAATGGTCGCCGGGAAAGTTATCGACCCAGCCGAAGTAGCCGCCTTCGCCGCCCCCG
CTGCCATCGTTATCGCCCACAATGCCGCCTTCGACCGCAAATTTATCGAACGGTTTTGCCCAAGTTTCTCGACCAAACCG
TGGGGCTGCTCAATGTCCCAGGTAGATTGGACAGGTGAAGGATTCGAAGGTACCAAGCTCGGATACCTGCTGGGCGGTTT
CGGCCTTTTTCACGATGGGCACCGGGCGACGGACGACTGCCACGCCGCCATCGAAATCCTGGCTCGGCCACTACCGAAGT
CCGGTGTTCCTGCCATGGGGAAGCTGCTGGAAAAAGCCAGGGAAGCGACGTGTCGGGTCTGGGCAGAAAATTCGCCATTT
GACCTGAAGGACGTATTGAAGGCACGGGGATACCGGTGGTCGGACGGAAGCGATGGCCGACCACGGGCTTGGTTCATCGA
CGTGCCCGAGGATCAGCTTCAGCAGGAAAAGGATTTCCTGGTCCAAGAAATCTATCAGCGGGAAGTGGACATTCATGCTG
CCCGGATCACCGCCGTTGATAGATTCTCAATTCGGTGCTGA

Upstream 100 bases:

>100_bases
ATGTCACGAGCAGACCGGGATGGCACTCTTCCTGGGTTCTTCCACCCCAACCTTTCACCACCACAGCGAACTGTAGCTGA
AGTTGAAGGCTGGATTCTGG

Downstream 100 bases:

>100_bases
CCATCCAGGAAGCTTGGCTCGGGCCATCATCGCCACGTCTGGCGGTAGGCCAACATGGTCGGCAAACGCCAGCACGGATG
ATTCGTCGGCCAGAAGGAAG

Product: DNA polymerase III subunit epsilon

Products: NA

Alternate protein names: Exonuclease RNAse T And DNA Polymerase III; Exonuclease; Exonuclease Family Protein; 3--5' Exonuclease; DNA Polymerase III Epsilon Subunit-Like Protein; Exonuclease Family

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MSPDEEERGMQEMGDHEKMAVALEATGQYRVLRKLIPRQNLVPHDGSKTRLGIFIDLETTGLDPAKDEIIELAMVPFVYG
LDGRIFEIQDAFQGLRQPSNPIPAEITKLTGITDEMVAGKVIDPAEVAAFAAPAAIVIAHNAAFDRKFIERFCPSFSTKP
WGCSMSQVDWTGEGFEGTKLGYLLGGFGLFHDGHRATDDCHAAIEILARPLPKSGVPAMGKLLEKAREATCRVWAENSPF
DLKDVLKARGYRWSDGSDGRPRAWFIDVPEDQLQQEKDFLVQEIYQREVDIHAARITAVDRFSIRC

Sequences:

>Translated_306_residues
MSPDEEERGMQEMGDHEKMAVALEATGQYRVLRKLIPRQNLVPHDGSKTRLGIFIDLETTGLDPAKDEIIELAMVPFVYG
LDGRIFEIQDAFQGLRQPSNPIPAEITKLTGITDEMVAGKVIDPAEVAAFAAPAAIVIAHNAAFDRKFIERFCPSFSTKP
WGCSMSQVDWTGEGFEGTKLGYLLGGFGLFHDGHRATDDCHAAIEILARPLPKSGVPAMGKLLEKAREATCRVWAENSPF
DLKDVLKARGYRWSDGSDGRPRAWFIDVPEDQLQQEKDFLVQEIYQREVDIHAARITAVDRFSIRC
>Mature_305_residues
SPDEEERGMQEMGDHEKMAVALEATGQYRVLRKLIPRQNLVPHDGSKTRLGIFIDLETTGLDPAKDEIIELAMVPFVYGL
DGRIFEIQDAFQGLRQPSNPIPAEITKLTGITDEMVAGKVIDPAEVAAFAAPAAIVIAHNAAFDRKFIERFCPSFSTKPW
GCSMSQVDWTGEGFEGTKLGYLLGGFGLFHDGHRATDDCHAAIEILARPLPKSGVPAMGKLLEKAREATCRVWAENSPFD
LKDVLKARGYRWSDGSDGRPRAWFIDVPEDQLQQEKDFLVQEIYQREVDIHAARITAVDRFSIRC

Specific function: Unknown

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34104; Mature: 33973

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPDEEERGMQEMGDHEKMAVALEATGQYRVLRKLIPRQNLVPHDGSKTRLGIFIDLETT
CCCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECC
GLDPAKDEIIELAMVPFVYGLDGRIFEIQDAFQGLRQPSNPIPAEITKLTGITDEMVAGK
CCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHCCC
VIDPAEVAAFAAPAAIVIAHNAAFDRKFIERFCPSFSTKPWGCSMSQVDWTGEGFEGTKL
CCCHHHHHHHHCCEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCH
GYLLGGFGLFHDGHRATDDCHAAIEILARPLPKSGVPAMGKLLEKAREATCRVWAENSPF
HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCC
DLKDVLKARGYRWSDGSDGRPRAWFIDVPEDQLQQEKDFLVQEIYQREVDIHAARITAVD
CHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEH
RFSIRC
EEECCC
>Mature Secondary Structure 
SPDEEERGMQEMGDHEKMAVALEATGQYRVLRKLIPRQNLVPHDGSKTRLGIFIDLETT
CCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECC
GLDPAKDEIIELAMVPFVYGLDGRIFEIQDAFQGLRQPSNPIPAEITKLTGITDEMVAGK
CCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHCCC
VIDPAEVAAFAAPAAIVIAHNAAFDRKFIERFCPSFSTKPWGCSMSQVDWTGEGFEGTKL
CCCHHHHHHHHCCEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCH
GYLLGGFGLFHDGHRATDDCHAAIEILARPLPKSGVPAMGKLLEKAREATCRVWAENSPF
HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCC
DLKDVLKARGYRWSDGSDGRPRAWFIDVPEDQLQQEKDFLVQEIYQREVDIHAARITAVD
CHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEH
RFSIRC
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA