| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310492
Identifier: 83310492
GI number: 83310492
Start: 1513752
End: 1515953
Strand: Reverse
Name: 83310492
Synonym: amb1393
Alternate gene names: NA
Gene position: 1515953-1513752 (Counterclockwise)
Preceding gene: 83310493
Following gene: 83310489
Centisome position: 30.52
GC content: 65.03
Gene sequence:
>2202_bases ATGAGCACCAATATCCAGCAAGAGACCATGAGCTTTGCCCAGATCGCGGCAACGCTCACCGCGCCGTCGACGTCCGACTA CGACGCCGTCGTGTCCCTGGGACAGCAGCAGCTCGACCAGTTTCTGTTCAGCACCTATGCCGCCCAGAACCATGCCCAGG TGGCGGTGTCGGGCCTGTCCCCGGTGGTGGACGGCATCTACGACGCCTTTTCCATGCGGGTCGCGCCCCCCATGCTGCAA TTCGTCAGCGATCAGGCCCAGCTCAGCTACCAGGTCTACGCCGGCTGCCTGCTTCAGATCGATGCCGCAGGCAATCCCAG CTACATGGTGGATTACGGGTCCAGCGGCTCGACCCTGATCGGCACCTATCCCCTGACCACCGCCCAGGGCGCCGACAACA GCGGCAGCGTGGTGATCGACTTCGCCCAGACCAAGAATCTGACCGGCCAGTGGACCGGCCAGCTGGCGGGCGTCGTGGCG AACTCGCAGGAGGCCCAGGAGATTTTCAGCGCCATCGGCGGCTATTTCAGCAGCAATCCGCTGATCTATACGCTGGGCTC GGTCAATACCAGCGGGACTCTGGCGGCGCTGACCCCCACCTCGTTCACCTTCTCCACCCAGAACGCCGTCAACAATCCCG GCTCCAACCTGATGCTGCTGATCACCACCGACGGCAGCGCGGGGGGCAACGCGCCCTCGGCGGACATCATTCCCTCGGGC AGTTCCGTGGGTGTGCTGGTGTCCAACCGCGTGATGTTCCAGGAGGTGTTCCCCGACCTGATGAACCAGGCCACCAAGGC CCAGAATGGCAATTTCACCTATCAGACCATCGGAGCCTCCTCCGCCTATCAGACGGTCAGCACCGCCGGCAGCCTGGACG TGGGCACCATTCAGGAGGGCAACGCCCTGCAGGGCGGCGTGTGGAGCAGTGACGCCGATTACAATCCGGTGGACCTCTAC GTGCCCCTGAGCGGCATGACCATGACTCCCGGGGCCAGCGGCATGGGTTTCTCCTGGACCTCCGACTGGAACCAGCTCTG GACCTCCATCACCTATACCAACGCCTTCAACAGCGTGATCGAGAACCGCAATCTCGAGACGGTTGGCCTTCAGGTCACCT CGACGGCGCTGCTGGTCCCGACGGTGACCAGCGCCACCAACGACACCGTGGCGTTCAGCGGTTCCTTCGCCACCAACACC GAGCCGACCACCAATTTCTCCATCTGGCAGGAACTGTTCGAAGGCGATGTGAATCTGGGATCATCGATCACCGATCCCAT CAACGAAGCCCTCGGCGGCTGGCTCGACAACCTGGGCCTGCCGCAGGTCAGCACCTTCCTGATCGACAACCTGCTGTTCC CGGCCTCGGGCCTTGTCGCCATCAACAATGCGGCCATTCCCTGCGACTTCTACACGGCGGGCAACATCGAAAGCCCATTG TCGCTGTCGCCCGGCATCAGCTCCCTGTCGGCTGGCCAGAGCGTGACTCTCAGCCTCAATCAGGCCGTCGCCCAGGTGGA ATGGTCGATCACCCCGCCCATCGGCAGCGTCACCAACGGAGTCTACACCGCGCCGTCCCAGATTGCCGCCCCGTCGCGAG TGGTGATCCAGGCCCTGAACGCCGGCGACCTGCAGCAGGTGGCCTATGCCCTGGTCGAGTTGTCTCCGACCCTGGCGGCG CTGACCATAACCCCCGCCAACGTCACCCTGGCCGCCGGCGGCGCATCGTTCCAGCTGCAGGCCATCGATGCCGATGGCCA GGTGGATTCCAACGCCACCTTCACAGCCAGCCTGGGCGTGGCCAAGAAGAACATGGAGGGCGACTGGTTCTACACGCCCC CCGGCTCGGTGTCGGCCCCCACCCCGGTCACCATCACCGCCCAGAGCAGCGCGGGCACCGCCACCGCCACCTGGAACGTG GTGCCGGTCGACGAGGCCTTTAACGTGACCTGCCCGGTGACCTCGCTGTCGGCGGGTCAGAGTGCGGTGCTGACCGCCAC CACCAGCCTGGGCATCCCCCAGGCGCTGTGGTGCATGATGCCGGAAGCCGGCTCGGTGATCGCCACCGGCCTGATGACGG CACAGTACACCGCGCCGGCCACCGTCACCTCGGCCCAGACCGTGACTCTTTGCGGCTTTGGCGGCAGTGCGACCACGGCC CTGGGCTGCGCGATGCTTTCCATCGACCTGACTCCGGGCTGA
Upstream 100 bases:
>100_bases CGTCATGACGGTCATCAACATGTTCCTGAACTTCTTCGCGCCGACCCTGGAGCTGAAGATGGAACAGGAAGGCCAATAGG AACGCGGGGAGGAGACGACA
Downstream 100 bases:
>100_bases GGCATGAAGAAAGCCCCCGGCCTCGCGGCCGGGGGCTTTTTCGTCGCCGTGACGGCGGGACCGGTCAGCCGCCCTGCTTG GCGGCGGAGCGGCGCGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 733; Mature: 732
Protein sequence:
>733_residues MSTNIQQETMSFAQIAATLTAPSTSDYDAVVSLGQQQLDQFLFSTYAAQNHAQVAVSGLSPVVDGIYDAFSMRVAPPMLQ FVSDQAQLSYQVYAGCLLQIDAAGNPSYMVDYGSSGSTLIGTYPLTTAQGADNSGSVVIDFAQTKNLTGQWTGQLAGVVA NSQEAQEIFSAIGGYFSSNPLIYTLGSVNTSGTLAALTPTSFTFSTQNAVNNPGSNLMLLITTDGSAGGNAPSADIIPSG SSVGVLVSNRVMFQEVFPDLMNQATKAQNGNFTYQTIGASSAYQTVSTAGSLDVGTIQEGNALQGGVWSSDADYNPVDLY VPLSGMTMTPGASGMGFSWTSDWNQLWTSITYTNAFNSVIENRNLETVGLQVTSTALLVPTVTSATNDTVAFSGSFATNT EPTTNFSIWQELFEGDVNLGSSITDPINEALGGWLDNLGLPQVSTFLIDNLLFPASGLVAINNAAIPCDFYTAGNIESPL SLSPGISSLSAGQSVTLSLNQAVAQVEWSITPPIGSVTNGVYTAPSQIAAPSRVVIQALNAGDLQQVAYALVELSPTLAA LTITPANVTLAAGGASFQLQAIDADGQVDSNATFTASLGVAKKNMEGDWFYTPPGSVSAPTPVTITAQSSAGTATATWNV VPVDEAFNVTCPVTSLSAGQSAVLTATTSLGIPQALWCMMPEAGSVIATGLMTAQYTAPATVTSAQTVTLCGFGGSATTA LGCAMLSIDLTPG
Sequences:
>Translated_733_residues MSTNIQQETMSFAQIAATLTAPSTSDYDAVVSLGQQQLDQFLFSTYAAQNHAQVAVSGLSPVVDGIYDAFSMRVAPPMLQ FVSDQAQLSYQVYAGCLLQIDAAGNPSYMVDYGSSGSTLIGTYPLTTAQGADNSGSVVIDFAQTKNLTGQWTGQLAGVVA NSQEAQEIFSAIGGYFSSNPLIYTLGSVNTSGTLAALTPTSFTFSTQNAVNNPGSNLMLLITTDGSAGGNAPSADIIPSG SSVGVLVSNRVMFQEVFPDLMNQATKAQNGNFTYQTIGASSAYQTVSTAGSLDVGTIQEGNALQGGVWSSDADYNPVDLY VPLSGMTMTPGASGMGFSWTSDWNQLWTSITYTNAFNSVIENRNLETVGLQVTSTALLVPTVTSATNDTVAFSGSFATNT EPTTNFSIWQELFEGDVNLGSSITDPINEALGGWLDNLGLPQVSTFLIDNLLFPASGLVAINNAAIPCDFYTAGNIESPL SLSPGISSLSAGQSVTLSLNQAVAQVEWSITPPIGSVTNGVYTAPSQIAAPSRVVIQALNAGDLQQVAYALVELSPTLAA LTITPANVTLAAGGASFQLQAIDADGQVDSNATFTASLGVAKKNMEGDWFYTPPGSVSAPTPVTITAQSSAGTATATWNV VPVDEAFNVTCPVTSLSAGQSAVLTATTSLGIPQALWCMMPEAGSVIATGLMTAQYTAPATVTSAQTVTLCGFGGSATTA LGCAMLSIDLTPG >Mature_732_residues STNIQQETMSFAQIAATLTAPSTSDYDAVVSLGQQQLDQFLFSTYAAQNHAQVAVSGLSPVVDGIYDAFSMRVAPPMLQF VSDQAQLSYQVYAGCLLQIDAAGNPSYMVDYGSSGSTLIGTYPLTTAQGADNSGSVVIDFAQTKNLTGQWTGQLAGVVAN SQEAQEIFSAIGGYFSSNPLIYTLGSVNTSGTLAALTPTSFTFSTQNAVNNPGSNLMLLITTDGSAGGNAPSADIIPSGS SVGVLVSNRVMFQEVFPDLMNQATKAQNGNFTYQTIGASSAYQTVSTAGSLDVGTIQEGNALQGGVWSSDADYNPVDLYV PLSGMTMTPGASGMGFSWTSDWNQLWTSITYTNAFNSVIENRNLETVGLQVTSTALLVPTVTSATNDTVAFSGSFATNTE PTTNFSIWQELFEGDVNLGSSITDPINEALGGWLDNLGLPQVSTFLIDNLLFPASGLVAINNAAIPCDFYTAGNIESPLS LSPGISSLSAGQSVTLSLNQAVAQVEWSITPPIGSVTNGVYTAPSQIAAPSRVVIQALNAGDLQQVAYALVELSPTLAAL TITPANVTLAAGGASFQLQAIDADGQVDSNATFTASLGVAKKNMEGDWFYTPPGSVSAPTPVTITAQSSAGTATATWNVV PVDEAFNVTCPVTSLSAGQSAVLTATTSLGIPQALWCMMPEAGSVIATGLMTAQYTAPATVTSAQTVTLCGFGGSATTAL GCAMLSIDLTPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75478; Mature: 75346
Theoretical pI: Translated: 3.36; Mature: 3.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTNIQQETMSFAQIAATLTAPSTSDYDAVVSLGQQQLDQFLFSTYAAQNHAQVAVSGLS CCCCCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCH PVVDGIYDAFSMRVAPPMLQFVSDQAQLSYQVYAGCLLQIDAAGNPSYMVDYGSSGSTLI HHHHHHHHHHHHHCCCHHHHHHCHHHHEEEEEEEEEEEEEECCCCCCEEEEECCCCCEEE GTYPLTTAQGADNSGSVVIDFAQTKNLTGQWTGQLAGVVANSQEAQEIFSAIGGYFSSNP EEECCEECCCCCCCCCEEEEEHHCCCCCCEECCEEEEEEECCHHHHHHHHHHCCCCCCCC LIYTLGSVNTSGTLAALTPTSFTFSTQNAVNNPGSNLMLLITTDGSAGGNAPSADIIPSG EEEEEECCCCCCEEEEECCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCEECCC SSVGVLVSNRVMFQEVFPDLMNQATKAQNGNFTYQTIGASSAYQTVSTAGSLDVGTIQEG CCEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCC NALQGGVWSSDADYNPVDLYVPLSGMTMTPGASGMGFSWTSDWNQLWTSITYTNAFNSVI CCCCCCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCHHHHHHEEEEHHHHHHHH ENRNLETVGLQVTSTALLVPTVTSATNDTVAFSGSFATNTEPTTNFSIWQELFEGDVNLG HCCCCEEEEEEEECEEEEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCC SSITDPINEALGGWLDNLGLPQVSTFLIDNLLFPASGLVAINNAAIPCDFYTAGNIESPL CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCEEEEECCCCCCCC SLSPGISSLSAGQSVTLSLNQAVAQVEWSITPPIGSVTNGVYTAPSQIAAPSRVVIQALN CCCCCCCCCCCCCEEEEEECCEEEEEEEEECCCCCCCCCCEEECCHHHCCCCEEEEEECC AGDLQQVAYALVELSPTLAALTITPANVTLAAGGASFQLQAIDADGQVDSNATFTASLGV CCCHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCEEEEEEECCCCCCCCCCEEEEECCC AKKNMEGDWFYTPPGSVSAPTPVTITAQSSAGTATATWNVVPVDEAFNVTCPVTSLSAGQ EECCCCCCEEECCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCEEECCCEECCCCC SAVLTATTSLGIPQALWCMMPEAGSVIATGLMTAQYTAPATVTSAQTVTLCGFGGSATTA CEEEEEECCCCCCHHHHHCCCCCCCEEEHHEEEEECCCCCEECCCCEEEEEECCCCHHHH LGCAMLSIDLTPG HEEEEEEEECCCC >Mature Secondary Structure STNIQQETMSFAQIAATLTAPSTSDYDAVVSLGQQQLDQFLFSTYAAQNHAQVAVSGLS CCCCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCH PVVDGIYDAFSMRVAPPMLQFVSDQAQLSYQVYAGCLLQIDAAGNPSYMVDYGSSGSTLI HHHHHHHHHHHHHCCCHHHHHHCHHHHEEEEEEEEEEEEEECCCCCCEEEEECCCCCEEE GTYPLTTAQGADNSGSVVIDFAQTKNLTGQWTGQLAGVVANSQEAQEIFSAIGGYFSSNP EEECCEECCCCCCCCCEEEEEHHCCCCCCEECCEEEEEEECCHHHHHHHHHHCCCCCCCC LIYTLGSVNTSGTLAALTPTSFTFSTQNAVNNPGSNLMLLITTDGSAGGNAPSADIIPSG EEEEEECCCCCCEEEEECCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCEECCC SSVGVLVSNRVMFQEVFPDLMNQATKAQNGNFTYQTIGASSAYQTVSTAGSLDVGTIQEG CCEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCC NALQGGVWSSDADYNPVDLYVPLSGMTMTPGASGMGFSWTSDWNQLWTSITYTNAFNSVI CCCCCCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCHHHHHHEEEEHHHHHHHH ENRNLETVGLQVTSTALLVPTVTSATNDTVAFSGSFATNTEPTTNFSIWQELFEGDVNLG HCCCCEEEEEEEECEEEEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCC SSITDPINEALGGWLDNLGLPQVSTFLIDNLLFPASGLVAINNAAIPCDFYTAGNIESPL CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCEEEEECCCCCCCC SLSPGISSLSAGQSVTLSLNQAVAQVEWSITPPIGSVTNGVYTAPSQIAAPSRVVIQALN CCCCCCCCCCCCCEEEEEECCEEEEEEEEECCCCCCCCCCEEECCHHHCCCCEEEEEECC AGDLQQVAYALVELSPTLAALTITPANVTLAAGGASFQLQAIDADGQVDSNATFTASLGV CCCHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCEEEEEEECCCCCCCCCCEEEEECCC AKKNMEGDWFYTPPGSVSAPTPVTITAQSSAGTATATWNVVPVDEAFNVTCPVTSLSAGQ EECCCCCCEEECCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCEEECCCEECCCCC SAVLTATTSLGIPQALWCMMPEAGSVIATGLMTAQYTAPATVTSAQTVTLCGFGGSATTA CEEEEEECCCCCCHHHHHCCCCCCCEEEHHEEEEECCCCCEECCCCEEEEEECCCCHHHH LGCAMLSIDLTPG HEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA