| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is ppsB [H]
Identifier: 83310459
GI number: 83310459
Start: 1475043
End: 1475846
Strand: Reverse
Name: ppsB [H]
Synonym: amb1360
Alternate gene names: 83310459
Gene position: 1475846-1475043 (Counterclockwise)
Preceding gene: 83310460
Following gene: 83310458
Centisome position: 29.71
GC content: 70.27
Gene sequence:
>804_bases GTGACACAATCCCTGCCTTCCGCCCTGTTCGGGGCCCGCGATTCCTCGCTGATCCGTGACGAGACCCTGTGGGAGATCTT CTCCACCAGCGCCAGGACCTTCCCCAGCGCCGCCGCCGCCACCTTCGGCGACACCACCTTGACCTATGCCCAGCTGGCGG AGCGCGCCCAGGCCGTGGCCCGTGCCCTGGCGGCGCGCGGCATCGGACGCGGCGATTTCGTCGGCCTGTGGATGAGCCGG TCGCTGGATCTGCATGTGGCGCTGCTGGGCATCCTGGCCGCCGGCGCCGCCTATATCCCCTTCGACACCGAAGCCCCCGC CGAGCGCGTCGCCGAATGCCTGGATGATTGCGCCGCCAAGGCGCTGATCGTCGACGCCTTCACCATGGGCGCCATCACCG GCGCCATGCCGGCCCATACCCTGATTCTGCCGACCCTGGAGCAGGGCGCCCCCGGCGGCGCCTCGCCCGACCCGCGCGCC CAGGGCGCCAATCCGGCCGACCCGGCCTATGCCATCTACACCTCGGGCTCCACCGGCAAGCCCAAGGCCATCGTCATCAG CCATTTCAACATCTGCCACTACCTGCGCGCCGCCAATTCCCTTTACGGCCTGCGCTCCGACGACGTGGTGTTCCAGGGCG CCTCGGTGGCCTTCGACCTGTCGCTGGAGGAGATCTTCGTCCCCTATCTGGTGGGCGCCAAGCTGTGGATCGCCGGCCGG CGCACCTGGCCGAGGCCGACCGCCTGCCGCAGGTGCTGGCCGAGGCCGGCATCACCGTGCTGGACACCGTGCCGACCCTG CTGA
Upstream 100 bases:
>100_bases TGGGGGGTGACCGCTTTGCCGTGAGTTGGTATACCCTCCCCATGGACGAGGCCTTGGCCATCGCCGCGCGCGCCGAAGCC GCGCCCAACCTGGAAATGAC
Downstream 100 bases:
>100_bases GCCTGCTGCCCGGCGACATTCCCGGCCTGCGGGTCATCATCCTGGGCGGCGAGGCCTGCCCCGCGGCCCTGGCCGAGCGC TGGTGCCGGCCCGGACGGCG
Product: Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
Products: pyrophosphate; AMP; enterobactin; pyrophosphate; L-Seryl-AMP [C]
Alternate protein names: Peptide synthase 2; ATP-dependent tyrosine adenylase 1; TyrA 1; Tyrosine activase 1; ATP-dependent threonine adenylase; ThrA; Threonine activase [H]
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MTQSLPSALFGARDSSLIRDETLWEIFSTSARTFPSAAAATFGDTTLTYAQLAERAQAVARALAARGIGRGDFVGLWMSR SLDLHVALLGILAAGAAYIPFDTEAPAERVAECLDDCAAKALIVDAFTMGAITGAMPAHTLILPTLEQGAPGGASPDPRA QGANPADPAYAIYTSGSTGKPKAIVISHFNICHYLRAANSLYGLRSDDVVFQGASVAFDLSLEEIFVPYLVGAKLWIAGR RTWPRPTACRRCWPRPASPCWTPCRPC
Sequences:
>Translated_267_residues MTQSLPSALFGARDSSLIRDETLWEIFSTSARTFPSAAAATFGDTTLTYAQLAERAQAVARALAARGIGRGDFVGLWMSR SLDLHVALLGILAAGAAYIPFDTEAPAERVAECLDDCAAKALIVDAFTMGAITGAMPAHTLILPTLEQGAPGGASPDPRA QGANPADPAYAIYTSGSTGKPKAIVISHFNICHYLRAANSLYGLRSDDVVFQGASVAFDLSLEEIFVPYLVGAKLWIAGR RTWPRPTACRRCWPRPASPCWTPCRPC >Mature_266_residues TQSLPSALFGARDSSLIRDETLWEIFSTSARTFPSAAAATFGDTTLTYAQLAERAQAVARALAARGIGRGDFVGLWMSRS LDLHVALLGILAAGAAYIPFDTEAPAERVAECLDDCAAKALIVDAFTMGAITGAMPAHTLILPTLEQGAPGGASPDPRAQ GANPADPAYAIYTSGSTGKPKAIVISHFNICHYLRAANSLYGLRSDDVVFQGASVAFDLSLEEIFVPYLVGAKLWIAGRR TWPRPTACRRCWPRPASPCWTPCRPC
Specific function: This protein is a multifunctional enzyme, able to activate and polymerize the amino acids Tyr and Thr as part of the biosynthesis of the lipopeptide antibiotic plipastatin. The Thr residue is further converted to the D-allo-isomer form. The activation sit
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 acyl carrier domains [H]
Homologues:
Organism=Homo sapiens, GI227499619, Length=209, Percent_Identity=30.1435406698565, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI40807357, Length=210, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=8e-12, Organism=Escherichia coli, GI1786801, Length=236, Percent_Identity=31.7796610169492, Blast_Score=102, Evalue=2e-23, Organism=Drosophila melanogaster, GI24648676, Length=230, Percent_Identity=29.5652173913043, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010071 - InterPro: IPR009081 - InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR001242 - InterPro: IPR010060 - InterPro: IPR006163 - InterPro: IPR006162 [H]
Pfam domain/function: PF00501 AMP-binding; PF00668 Condensation; PF00550 PP-binding [H]
EC number: 2.7.7.- [C]
Molecular weight: Translated: 28404; Mature: 28272
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQSLPSALFGARDSSLIRDETLWEIFSTSARTFPSAAAATFGDTTLTYAQLAERAQAVA CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHH RALAARGIGRGDFVGLWMSRSLDLHVALLGILAAGAAYIPFDTEAPAERVAECLDDCAAK HHHHHCCCCCCCEEEEEHHCCCCHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHH ALIVDAFTMGAITGAMPAHTLILPTLEQGAPGGASPDPRAQGANPADPAYAIYTSGSTGK HHHHHHHHHHHHHCCCCCCEEEEECHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC PKAIVISHFNICHYLRAANSLYGLRSDDVVFQGASVAFDLSLEEIFVPYLVGAKLWIAGR CCEEEEEHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEECCHHHHHHHHHHCCEEEEECC RTWPRPTACRRCWPRPASPCWTPCRPC CCCCCCHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TQSLPSALFGARDSSLIRDETLWEIFSTSARTFPSAAAATFGDTTLTYAQLAERAQAVA CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHH RALAARGIGRGDFVGLWMSRSLDLHVALLGILAAGAAYIPFDTEAPAERVAECLDDCAAK HHHHHCCCCCCCEEEEEHHCCCCHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHH ALIVDAFTMGAITGAMPAHTLILPTLEQGAPGGASPDPRAQGANPADPAYAIYTSGSTGK HHHHHHHHHHHHHCCCCCCEEEEECHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC PKAIVISHFNICHYLRAANSLYGLRSDDVVFQGASVAFDLSLEEIFVPYLVGAKLWIAGR CCEEEEEHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEECCHHHHHHHHHHCCEEEEECC RTWPRPTACRRCWPRPASPCWTPCRPC CCCCCCHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: Phosphopantetheine. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 6 ATP; L-serine; 2,3-dihydroxybenzoate [C]
Specific reaction: 6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate = 6 pyrophosphate + 6 AMP + enterobactin ATP + L-serine = pyrophosphate + L-Seryl-AMP 6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate = 6 pyrophosphate + 6 AMP + enterobactin ATP + L-serine = pyrophosphate + L-Ser
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7711903; 9384377; 10471562 [H]