| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is yhhU [C]
Identifier: 83310460
GI number: 83310460
Start: 1475843
End: 1476457
Strand: Reverse
Name: yhhU [C]
Synonym: amb1361
Alternate gene names: 83310460
Gene position: 1476457-1475843 (Counterclockwise)
Preceding gene: 83310468
Following gene: 83310459
Centisome position: 29.72
GC content: 69.11
Gene sequence:
>615_bases ATGCGATTAGACACAGTACCATTGGATGGGATGACCTGGCTTTACACCGGCATCGCCCAGGCGGCGGAGGCGCGGTCACG GGTGCTTGTCCGCCATCTGGCCCGCCGGTTGGACCGCCCCGAGGCCGAAATCGTCCTGGCCCGCGATTCCTTCGGCAAGC CCATGCTGGCCGATCCGGATTCGGGCTACTGGTTCAACTGCGCGTCCTGCGACGGATTGCTGCTGATCGCCGGCTCGCGC CAGGGGCCAGTGGGGGCTGACGTGGAGACGCTGGAGCGCTGCATCCCCGTATGGGAGGACGCCTCGCAAGGCTTCGCCCC GGCCGAGCGGGCGCTGCTGGCCGCCCTGCCCGCCGCCCGGCGGCCCCTGGCCTTCGCCCGGCTGTGGACCGCCAAGGAGG CGGTGCTGAAGGCCAGGGGCACCGGCATCGTCGACGGCCTGGCCGAACCGGACCTGTCGTTCCTGCGGGATCTGGCCGAT TCGCCCCCCTGGATCAGCACAAAAGTCAACGTGGGGGGTGACCGCTTTGCCGTGAGTTGGTATACCCTCCCCATGGACGA GGCCTTGGCCATCGCCGCGCGCGCCGAAGCCGCGCCCAACCTGGAAATGACGTGA
Upstream 100 bases:
>100_bases GGGAACGATAACGGGTGACGATCTCTGGTTCACGCGCCATTCTGACCATCCACCCCGAGGAAACCGCCCACCAGAATGCC GCATTGGGACGGCAGAGTCG
Downstream 100 bases:
>100_bases CACAATCCCTGCCTTCCGCCCTGTTCGGGGCCCGCGATTCCTCGCTGATCCGTGACGAGACCCTGTGGGAGATCTTCTCC ACCAGCGCCAGGACCTTCCC
Product: phosphopantetheinyl transferase
Products: adenosine 3',5'-bisphosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MRLDTVPLDGMTWLYTGIAQAAEARSRVLVRHLARRLDRPEAEIVLARDSFGKPMLADPDSGYWFNCASCDGLLLIAGSR QGPVGADVETLERCIPVWEDASQGFAPAERALLAALPAARRPLAFARLWTAKEAVLKARGTGIVDGLAEPDLSFLRDLAD SPPWISTKVNVGGDRFAVSWYTLPMDEALAIAARAEAAPNLEMT
Sequences:
>Translated_204_residues MRLDTVPLDGMTWLYTGIAQAAEARSRVLVRHLARRLDRPEAEIVLARDSFGKPMLADPDSGYWFNCASCDGLLLIAGSR QGPVGADVETLERCIPVWEDASQGFAPAERALLAALPAARRPLAFARLWTAKEAVLKARGTGIVDGLAEPDLSFLRDLAD SPPWISTKVNVGGDRFAVSWYTLPMDEALAIAARAEAAPNLEMT >Mature_204_residues MRLDTVPLDGMTWLYTGIAQAAEARSRVLVRHLARRLDRPEAEIVLARDSFGKPMLADPDSGYWFNCASCDGLLLIAGSR QGPVGADVETLERCIPVWEDASQGFAPAERALLAALPAARRPLAFARLWTAKEAVLKARGTGIVDGLAEPDLSFLRDLAD SPPWISTKVNVGGDRFAVSWYTLPMDEALAIAARAEAAPNLEMT
Specific function: Probably transfers the 4'-phosphopantetheine moiety from coenzyme A (CoA) to a serine residue of a carrier protein domain [H]
COG id: COG2091
COG function: function code H; Phosphopantetheinyl transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the P-Pant transferase superfamily. Gsp/sfp/hetI/acpT family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008278 - InterPro: IPR004568 - ProDom: PD004282 [H]
Pfam domain/function: PF01648 ACPS [H]
EC number: NA
Molecular weight: Translated: 22104; Mature: 22104
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLDTVPLDGMTWLYTGIAQAAEARSRVLVRHLARRLDRPEAEIVLARDSFGKPMLADPD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCC SGYWFNCASCDGLLLIAGSRQGPVGADVETLERCIPVWEDASQGFAPAERALLAALPAAR CCCEEEECCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCC RPLAFARLWTAKEAVLKARGTGIVDGLAEPDLSFLRDLADSPPWISTKVNVGGDRFAVSW CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCEEEEEE YTLPMDEALAIAARAEAAPNLEMT EECCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRLDTVPLDGMTWLYTGIAQAAEARSRVLVRHLARRLDRPEAEIVLARDSFGKPMLADPD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCC SGYWFNCASCDGLLLIAGSRQGPVGADVETLERCIPVWEDASQGFAPAERALLAALPAAR CCCEEEECCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCC RPLAFARLWTAKEAVLKARGTGIVDGLAEPDLSFLRDLADSPPWISTKVNVGGDRFAVSW CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCEEEEEE YTLPMDEALAIAARAEAAPNLEMT EECCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Coenzyme A; apo-[acyl carrier protein] [C]
Specific reaction: Coenzyme A + apo-[acyl carrier protein] = adenosine 3',5'-bisphosphate + [acyl carrier protein] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]