Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is 83310212

Identifier: 83310212

GI number: 83310212

Start: 1187432

End: 1187860

Strand: Reverse

Name: 83310212

Synonym: amb1113

Alternate gene names: NA

Gene position: 1187860-1187432 (Counterclockwise)

Preceding gene: 83310213

Following gene: 83310211

Centisome position: 23.91

GC content: 72.96

Gene sequence:

>429_bases
ATGGGCCGCCCGCGCCGCATCATCTGCGTCGGCAACCGCCATCGTCCCGACGACGATCTCGGCCCCCGCGTCCACGACCT
GCTGGCCGGGGCGGCACTGCCCCAGGGGGTCGAACTGGTGGATGGCGGCCTGTGCGGCCTGGACCTGCTCTTGACCGTCG
AGACGGCCGGGCGGGCGGTGTTCGTCGATACCGTCGCGGGCTTTGGCCTGCCGGGTCAGGTGGTGATGCTGTCGCGGCAC
GAGGTGGCGGCCCTGGCCGAGGGGTCCTGGGGCCACGATTCCGGCCTGCCCTACCTCTTCCACCTGCTGCCAAGGGTCTG
CGACGGCGCGGTGCCCGAGGTGATCCTGGTGGGCGGCGAGGCGCCCGCCGGGGACATGCTCGTCGCCGCCCTTGCCGCCC
GTGCCGTCGAGGAGGCATCCAAGCCATGA

Upstream 100 bases:

>100_bases
GTCGGCCATGTGATCCGCTCCTTCGACCCCTGTCTGGTCTGTTCCGTCCATACGGTACGCAAGGGCCGAAGCCTCGGCCG
CGTGCGTCTGGAGGCCTGAG

Downstream 100 bases:

>100_bases
CCGACCGCATCGCCGAGCTTGTCGCCGAGAACGCCCTGCTGCGCGGCGAGATCCGCGTCGCCCGCGAGGCCGCCGAGATC
ACCGCCCGGCTGGTGGTCAA

Product: Ni,Fe-hydrogenase maturation factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MGRPRRIICVGNRHRPDDDLGPRVHDLLAGAALPQGVELVDGGLCGLDLLLTVETAGRAVFVDTVAGFGLPGQVVMLSRH
EVAALAEGSWGHDSGLPYLFHLLPRVCDGAVPEVILVGGEAPAGDMLVAALAARAVEEASKP

Sequences:

>Translated_142_residues
MGRPRRIICVGNRHRPDDDLGPRVHDLLAGAALPQGVELVDGGLCGLDLLLTVETAGRAVFVDTVAGFGLPGQVVMLSRH
EVAALAEGSWGHDSGLPYLFHLLPRVCDGAVPEVILVGGEAPAGDMLVAALAARAVEEASKP
>Mature_141_residues
GRPRRIICVGNRHRPDDDLGPRVHDLLAGAALPQGVELVDGGLCGLDLLLTVETAGRAVFVDTVAGFGLPGQVVMLSRHE
VAALAEGSWGHDSGLPYLFHLLPRVCDGAVPEVILVGGEAPAGDMLVAALAARAVEEASKP

Specific function: Unknown

COG id: COG0680

COG function: function code C; Ni,Fe-hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14716; Mature: 14585

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRPRRIICVGNRHRPDDDLGPRVHDLLAGAALPQGVELVDGGLCGLDLLLTVETAGRAV
CCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCEEEEEEEECCCCEE
FVDTVAGFGLPGQVVMLSRHEVAALAEGSWGHDSGLPYLFHLLPRVCDGAVPEVILVGGE
EEECHHCCCCCCEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCC
APAGDMLVAALAARAVEEASKP
CCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GRPRRIICVGNRHRPDDDLGPRVHDLLAGAALPQGVELVDGGLCGLDLLLTVETAGRAV
CCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCEEEEEEEECCCCEE
FVDTVAGFGLPGQVVMLSRHEVAALAEGSWGHDSGLPYLFHLLPRVCDGAVPEVILVGGE
EEECHHCCCCCCEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCC
APAGDMLVAALAARAVEEASKP
CCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA