| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310212
Identifier: 83310212
GI number: 83310212
Start: 1187432
End: 1187860
Strand: Reverse
Name: 83310212
Synonym: amb1113
Alternate gene names: NA
Gene position: 1187860-1187432 (Counterclockwise)
Preceding gene: 83310213
Following gene: 83310211
Centisome position: 23.91
GC content: 72.96
Gene sequence:
>429_bases ATGGGCCGCCCGCGCCGCATCATCTGCGTCGGCAACCGCCATCGTCCCGACGACGATCTCGGCCCCCGCGTCCACGACCT GCTGGCCGGGGCGGCACTGCCCCAGGGGGTCGAACTGGTGGATGGCGGCCTGTGCGGCCTGGACCTGCTCTTGACCGTCG AGACGGCCGGGCGGGCGGTGTTCGTCGATACCGTCGCGGGCTTTGGCCTGCCGGGTCAGGTGGTGATGCTGTCGCGGCAC GAGGTGGCGGCCCTGGCCGAGGGGTCCTGGGGCCACGATTCCGGCCTGCCCTACCTCTTCCACCTGCTGCCAAGGGTCTG CGACGGCGCGGTGCCCGAGGTGATCCTGGTGGGCGGCGAGGCGCCCGCCGGGGACATGCTCGTCGCCGCCCTTGCCGCCC GTGCCGTCGAGGAGGCATCCAAGCCATGA
Upstream 100 bases:
>100_bases GTCGGCCATGTGATCCGCTCCTTCGACCCCTGTCTGGTCTGTTCCGTCCATACGGTACGCAAGGGCCGAAGCCTCGGCCG CGTGCGTCTGGAGGCCTGAG
Downstream 100 bases:
>100_bases CCGACCGCATCGCCGAGCTTGTCGCCGAGAACGCCCTGCTGCGCGGCGAGATCCGCGTCGCCCGCGAGGCCGCCGAGATC ACCGCCCGGCTGGTGGTCAA
Product: Ni,Fe-hydrogenase maturation factor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MGRPRRIICVGNRHRPDDDLGPRVHDLLAGAALPQGVELVDGGLCGLDLLLTVETAGRAVFVDTVAGFGLPGQVVMLSRH EVAALAEGSWGHDSGLPYLFHLLPRVCDGAVPEVILVGGEAPAGDMLVAALAARAVEEASKP
Sequences:
>Translated_142_residues MGRPRRIICVGNRHRPDDDLGPRVHDLLAGAALPQGVELVDGGLCGLDLLLTVETAGRAVFVDTVAGFGLPGQVVMLSRH EVAALAEGSWGHDSGLPYLFHLLPRVCDGAVPEVILVGGEAPAGDMLVAALAARAVEEASKP >Mature_141_residues GRPRRIICVGNRHRPDDDLGPRVHDLLAGAALPQGVELVDGGLCGLDLLLTVETAGRAVFVDTVAGFGLPGQVVMLSRHE VAALAEGSWGHDSGLPYLFHLLPRVCDGAVPEVILVGGEAPAGDMLVAALAARAVEEASKP
Specific function: Unknown
COG id: COG0680
COG function: function code C; Ni,Fe-hydrogenase maturation factor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14716; Mature: 14585
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRPRRIICVGNRHRPDDDLGPRVHDLLAGAALPQGVELVDGGLCGLDLLLTVETAGRAV CCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCEEEEEEEECCCCEE FVDTVAGFGLPGQVVMLSRHEVAALAEGSWGHDSGLPYLFHLLPRVCDGAVPEVILVGGE EEECHHCCCCCCEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCC APAGDMLVAALAARAVEEASKP CCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GRPRRIICVGNRHRPDDDLGPRVHDLLAGAALPQGVELVDGGLCGLDLLLTVETAGRAV CCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCEEEEEEEECCCCEE FVDTVAGFGLPGQVVMLSRHEVAALAEGSWGHDSGLPYLFHLLPRVCDGAVPEVILVGGE EEECHHCCCCCCEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCC APAGDMLVAALAARAVEEASKP CCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA