| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310078
Identifier: 83310078
GI number: 83310078
Start: 1039265
End: 1039930
Strand: Reverse
Name: 83310078
Synonym: amb0979
Alternate gene names: NA
Gene position: 1039930-1039265 (Counterclockwise)
Preceding gene: 83310081
Following gene: 83310059
Centisome position: 20.94
GC content: 60.21
Gene sequence:
>666_bases ATGGCCGCAACATCCGGCGGCGGCCGAGGCCCCGATATCGAGCATCTGCCACCGTCCAACCGCCGCGTCCAGGTTGTCCA AGAGGCCCTGCGCATCTCTCAAGAGCTTCAAGCCCTGCTTCACGACCCCGCCGAGGAAAACGCCAAGGCGAAGATCAGCG ACCATTTCAATCGTCTGATGAACCTCATGGGGCTGGTCCACGGCTATTGCCGGGAGGAAGGCGAGGCAGGGTCCTTCTTC AAAAAGAAATACGCCGAGATCATGCGGACCGTCAGTAAGTTCTCGTTGGGAATCCTGGCCTCCGGCCTCGAACGGACCGT CCAGGAATCGTCTCGGATCGTCGATGGAACCACCCCCGCCGCATTGGGAGCGTCGTCGAAGATCTTTTACAAGATGTCCG AATTCGACACCTTGATCACAATGCTCGGCGGCTACCCCTCGCTCTCCCTCGACCTGTTGGAGATGATCAAGACCGGATGG CAGAACGTGCTGTCGCTGACGGCCCGAGACGATACCCTCAGCGAGCTGGAAAAGGATGACGCCGCACCGCTGAAGCTTGT GGCCGCCAAGCGACTGAACGATGCGGATGTAATCTTGCAAGAGCGCCGCGCCGCCGATTCCCAAGAGGCCGCCTTCCAGC GCCTCAACCAATCGCCAACAGCGTAG
Upstream 100 bases:
>100_bases GTCCGCCGCCGCCCGGCCCGAAAATGCCGCCGAGGCGCCGAGCGGCGCGACCGCCGAGACGCCAAGCCGGCCGCCGTCCA AAGCCACCGCCGGAATCGGC
Downstream 100 bases:
>100_bases CGGCCCCGGTCCCTATAGCGGCGAGCGCCAAATCCGGCGCACGCCGCGATCAGCCGCCATTGCGGCTGTGGCCAAGCGGC CGGAGGGCCGCGGACGCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MAATSGGGRGPDIEHLPPSNRRVQVVQEALRISQELQALLHDPAEENAKAKISDHFNRLMNLMGLVHGYCREEGEAGSFF KKKYAEIMRTVSKFSLGILASGLERTVQESSRIVDGTTPAALGASSKIFYKMSEFDTLITMLGGYPSLSLDLLEMIKTGW QNVLSLTARDDTLSELEKDDAAPLKLVAAKRLNDADVILQERRAADSQEAAFQRLNQSPTA
Sequences:
>Translated_221_residues MAATSGGGRGPDIEHLPPSNRRVQVVQEALRISQELQALLHDPAEENAKAKISDHFNRLMNLMGLVHGYCREEGEAGSFF KKKYAEIMRTVSKFSLGILASGLERTVQESSRIVDGTTPAALGASSKIFYKMSEFDTLITMLGGYPSLSLDLLEMIKTGW QNVLSLTARDDTLSELEKDDAAPLKLVAAKRLNDADVILQERRAADSQEAAFQRLNQSPTA >Mature_220_residues AATSGGGRGPDIEHLPPSNRRVQVVQEALRISQELQALLHDPAEENAKAKISDHFNRLMNLMGLVHGYCREEGEAGSFFK KKYAEIMRTVSKFSLGILASGLERTVQESSRIVDGTTPAALGASSKIFYKMSEFDTLITMLGGYPSLSLDLLEMIKTGWQ NVLSLTARDDTLSELEKDDAAPLKLVAAKRLNDADVILQERRAADSQEAAFQRLNQSPTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24237; Mature: 24106
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATSGGGRGPDIEHLPPSNRRVQVVQEALRISQELQALLHDPAEENAKAKISDHFNRLM CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHH NLMGLVHGYCREEGEAGSFFKKKYAEIMRTVSKFSLGILASGLERTVQESSRIVDGTTPA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH ALGASSKIFYKMSEFDTLITMLGGYPSLSLDLLEMIKTGWQNVLSLTARDDTLSELEKDD HHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC AAPLKLVAAKRLNDADVILQERRAADSQEAAFQRLNQSPTA CCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCCCC >Mature Secondary Structure AATSGGGRGPDIEHLPPSNRRVQVVQEALRISQELQALLHDPAEENAKAKISDHFNRLM CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHH NLMGLVHGYCREEGEAGSFFKKKYAEIMRTVSKFSLGILASGLERTVQESSRIVDGTTPA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH ALGASSKIFYKMSEFDTLITMLGGYPSLSLDLLEMIKTGWQNVLSLTARDDTLSELEKDD HHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC AAPLKLVAAKRLNDADVILQERRAADSQEAAFQRLNQSPTA CCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA