| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is eamA [H]
Identifier: 83309959
GI number: 83309959
Start: 918907
End: 919812
Strand: Reverse
Name: eamA [H]
Synonym: amb0860
Alternate gene names: 83309959
Gene position: 919812-918907 (Counterclockwise)
Preceding gene: 83309960
Following gene: 83309958
Centisome position: 18.52
GC content: 69.65
Gene sequence:
>906_bases ATGGCCATGACCGCCCCCTCGCGCCTCACGCCCCTGGAATGGGCCTCGGCCACCCTGGTGGTCACCCTGTGGGGCCTCAA TTTCGTGGCGGTGAAGACGGCCTTGGGCACCTTGCCGCCCTTCCTGCTGACCGCCTTGCGCTTCGCCTGCACCGCGCTGA TCCTGGCGCCGTTCTTCCGCCCCAGCCGCGCCCAGTTGCCCGGCATCCTCCTGCTGGCCCTGTTGCTGGGGGTCGGGCAT TTCGGCCTGATGTTCTTCGGTGTCGCCGGCATGGACGCCGCCACCGCCGCCATCGTCATCGAGCTGTCCATTCCCTTCTC CGCCATCCTGGCCTGGGCCTTCTTCGGCGAGGTGCTGGGAGTCTGGCGCAGCCTGGGGCTGGCGGTGTCGTTCATCGGCG TCGCCCTGCTGGCCGGCGAGCCCCACCTGCCCCGCCTCACGCCGTTCATCGCCGTGGTGGCCTCGGGCTTCGCCTGGGCC TTGGCCAATGTGGTGATCAAGCGCTTAGGCGCCATCAATCCCCTGGCGCTGAACGGTTGGATGGCCATGCTGGCCTCGCC CTTGCTGCTGGGCCTGTCGCTGGCGACGGAAAGCGGGCAGATGGAGGCGCTGGCCGCCACCGGGATCAAGGGCTGGAGCG GCGTGGCCTACACCATCGTCGGCTCGACCCTGATCGCCTATACTCTGTGGTATCGCCTGATCGCCCGTCACCCCATGAAC CGGGTGGTGCCCTTCACCCTGCTGGGGCCGGTGGTGGGGCTGGCCGGTGGCGTGCTGCTGCTGGGCGAGCCGCTGACCTG GCACAAGCTGGTGGGCGGCGCCCTGACCGTGCTGGGCGTCGCCGTGGTGGAACTGCTGCCCGGCCGCGCCATCCACCGTG CGGAAGAACCGGAGCCCGGAACATGA
Upstream 100 bases:
>100_bases CGAAGCTCGTGCCTGAAAGATCCTTCGCCTATGGCTCAGGATGACATGGAGAGGTGCGCTCCATGACCCCCTCCTTCCGG AGCGCGGGCGTCCCGCCCGC
Downstream 100 bases:
>100_bases CCATCATTTCCCGCCCCTCGCCCAATTTCGAGCCGCGCCCGGCCGGGGCCATCGTCGACACCCTGGTGCTGCACTATACC GGCATGGAATCGGGCGAGGC
Product: DMT family permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MAMTAPSRLTPLEWASATLVVTLWGLNFVAVKTALGTLPPFLLTALRFACTALILAPFFRPSRAQLPGILLLALLLGVGH FGLMFFGVAGMDAATAAIVIELSIPFSAILAWAFFGEVLGVWRSLGLAVSFIGVALLAGEPHLPRLTPFIAVVASGFAWA LANVVIKRLGAINPLALNGWMAMLASPLLLGLSLATESGQMEALAATGIKGWSGVAYTIVGSTLIAYTLWYRLIARHPMN RVVPFTLLGPVVGLAGGVLLLGEPLTWHKLVGGALTVLGVAVVELLPGRAIHRAEEPEPGT
Sequences:
>Translated_301_residues MAMTAPSRLTPLEWASATLVVTLWGLNFVAVKTALGTLPPFLLTALRFACTALILAPFFRPSRAQLPGILLLALLLGVGH FGLMFFGVAGMDAATAAIVIELSIPFSAILAWAFFGEVLGVWRSLGLAVSFIGVALLAGEPHLPRLTPFIAVVASGFAWA LANVVIKRLGAINPLALNGWMAMLASPLLLGLSLATESGQMEALAATGIKGWSGVAYTIVGSTLIAYTLWYRLIARHPMN RVVPFTLLGPVVGLAGGVLLLGEPLTWHKLVGGALTVLGVAVVELLPGRAIHRAEEPEPGT >Mature_300_residues AMTAPSRLTPLEWASATLVVTLWGLNFVAVKTALGTLPPFLLTALRFACTALILAPFFRPSRAQLPGILLLALLLGVGHF GLMFFGVAGMDAATAAIVIELSIPFSAILAWAFFGEVLGVWRSLGLAVSFIGVALLAGEPHLPRLTPFIAVVASGFAWAL ANVVIKRLGAINPLALNGWMAMLASPLLLGLSLATESGQMEALAATGIKGWSGVAYTIVGSTLIAYTLWYRLIARHPMNR VVPFTLLGPVVGLAGGVLLLGEPLTWHKLVGGALTVLGVAVVELLPGRAIHRAEEPEPGT
Specific function: May be an export pump for cysteine and other metabolites of the cysteine pathway (such as N-acetyl-L-serine (NAS) and O- acetyl-L-serine (OAS)), and for other amino acids and their metabolites [H]
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
Organism=Escherichia coli, GI87081929, Length=276, Percent_Identity=30.4347826086957, Blast_Score=91, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 31525; Mature: 31394
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMTAPSRLTPLEWASATLVVTLWGLNFVAVKTALGTLPPFLLTALRFACTALILAPFFR CCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC PSRAQLPGILLLALLLGVGHFGLMFFGVAGMDAATAAIVIELSIPFSAILAWAFFGEVLG CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECCCHHHHHHHHHHHHHHH VWRSLGLAVSFIGVALLAGEPHLPRLTPFIAVVASGFAWALANVVIKRLGAINPLALNGW HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH MAMLASPLLLGLSLATESGQMEALAATGIKGWSGVAYTIVGSTLIAYTLWYRLIARHPMN HHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH RVVPFTLLGPVVGLAGGVLLLGEPLTWHKLVGGALTVLGVAVVELLPGRAIHRAEEPEPG HCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCC T C >Mature Secondary Structure AMTAPSRLTPLEWASATLVVTLWGLNFVAVKTALGTLPPFLLTALRFACTALILAPFFR CCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC PSRAQLPGILLLALLLGVGHFGLMFFGVAGMDAATAAIVIELSIPFSAILAWAFFGEVLG CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECCCHHHHHHHHHHHHHHH VWRSLGLAVSFIGVALLAGEPHLPRLTPFIAVVASGFAWALANVVIKRLGAINPLALNGW HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH MAMLASPLLLGLSLATESGQMEALAATGIKGWSGVAYTIVGSTLIAYTLWYRLIARHPMN HHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH RVVPFTLLGPVVGLAGGVLLLGEPLTWHKLVGGALTVLGVAVVELLPGRAIHRAEEPEPG HCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCC T C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8383113; 9097039; 9278503; 10844694 [H]