| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is hpcG [H]
Identifier: 83309901
GI number: 83309901
Start: 860107
End: 860913
Strand: Reverse
Name: hpcG [H]
Synonym: amb0802
Alternate gene names: 83309901
Gene position: 860913-860107 (Counterclockwise)
Preceding gene: 83309902
Following gene: 83309900
Centisome position: 17.33
GC content: 67.16
Gene sequence:
>807_bases ATGGCTCTCACGCTCGATCAGATCAATGCCGCCGCCGCCCGCCTGCATCGGGCCGAGCAGACCCGACACCAGTGCGGCCA GATTTCGCTGGACCACCCCGAGATGGGCATGGCCGACGCCTACGCGGTGCAAAAGGCTTGGGTCGAGACCAAGATCAATG AGGGCCGCAAGGTGGTGGGCCACAAGATCGGCCTGACCTCGCGGGCCATGCAGCAATCGTCGCAGATCGACGAGCCCGAT TACGGCACCCTGCTCGACGACATGGTGTTCGGCGAAGGCACCGACATTCCCATGGCGCGCTTCATCGTCCCCATGGTCGA GGTGGAACTGGCCTTCATCCTGAAAGACCGGCTGGAAGGCCCCGACGTCACCCTGACCCAGGTGCTGTCGGCCACCGATT ACGTCATTCCGGCGCTGGAGATCATCGACGCCCGCTGCCACCGCCTCGACCCCGAGACCAAGCGGCCGCGCAAGGTGTTC GACACCATCTCCGACAACGCCGCCAATGCCGGCATCGTCATGGGCGGCCGGCCGGTCAGGCCCATGGACGTGGACCTGCG CTGGGTGGCGGCCATCATGTACAGGAACGGGGTGATCGAGGAAACCGGCGTCGCCGCCGGGGTGCTGAACCATCCGGCCC ACGGCATTTCCTGGCTGGCCCGCAAGTTCGCCCCCCACAGCATCGCGTTGGAGCCGGGGCAGGTGGTGCTGGCCGGCTCC TTCACTCGCCCGGTGCCGGCGCGGGCCGGCGACACCTTCCATGTGGATTACGGCCCGCTGGGCGCCATCGCCTGCCGGTT CGTGTAG
Upstream 100 bases:
>100_bases CAGCGGCTATTTCGCGCTCTCCATGGAGCTCTACGAGTTCGACGAGGGCGGCACCTTCAAGAAGAACAACGTCCACGCCC GTTTCAGGAAGGCTTGACCC
Downstream 100 bases:
>100_bases GGCTATCTGACCTGTCATCCCGAGGCGCAAGCCGAGGGATCTCATTCTGGCAGGTCTTTTCATAAACCGGCACCATCGTG CCAAGCGGAGATCCTTCGCT
Product: 2-keto-4-pentenoate hydratase
Products: NA
Alternate protein names: OHED hydratase [H]
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MALTLDQINAAAARLHRAEQTRHQCGQISLDHPEMGMADAYAVQKAWVETKINEGRKVVGHKIGLTSRAMQQSSQIDEPD YGTLLDDMVFGEGTDIPMARFIVPMVEVELAFILKDRLEGPDVTLTQVLSATDYVIPALEIIDARCHRLDPETKRPRKVF DTISDNAANAGIVMGGRPVRPMDVDLRWVAAIMYRNGVIEETGVAAGVLNHPAHGISWLARKFAPHSIALEPGQVVLAGS FTRPVPARAGDTFHVDYGPLGAIACRFV
Sequences:
>Translated_268_residues MALTLDQINAAAARLHRAEQTRHQCGQISLDHPEMGMADAYAVQKAWVETKINEGRKVVGHKIGLTSRAMQQSSQIDEPD YGTLLDDMVFGEGTDIPMARFIVPMVEVELAFILKDRLEGPDVTLTQVLSATDYVIPALEIIDARCHRLDPETKRPRKVF DTISDNAANAGIVMGGRPVRPMDVDLRWVAAIMYRNGVIEETGVAAGVLNHPAHGISWLARKFAPHSIALEPGQVVLAGS FTRPVPARAGDTFHVDYGPLGAIACRFV >Mature_267_residues ALTLDQINAAAARLHRAEQTRHQCGQISLDHPEMGMADAYAVQKAWVETKINEGRKVVGHKIGLTSRAMQQSSQIDEPDY GTLLDDMVFGEGTDIPMARFIVPMVEVELAFILKDRLEGPDVTLTQVLSATDYVIPALEIIDARCHRLDPETKRPRKVFD TISDNAANAGIVMGGRPVRPMDVDLRWVAAIMYRNGVIEETGVAAGVLNHPAHGISWLARKFAPHSIALEPGQVVLAGSF TRPVPARAGDTFHVDYGPLGAIACRFV
Specific function: Transforms 2-oxo-hept-3-ene-1,7-dioate (OHED) into 2,4- dihydoxy-hept-2-ene-1,7-dioic acid (HHED) [H]
COG id: COG3971
COG function: function code Q; 2-keto-4-pentenoate hydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hydratase/decarboxylase family [H]
Homologues:
Organism=Escherichia coli, GI87081722, Length=268, Percent_Identity=34.3283582089552, Blast_Score=152, Evalue=2e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002529 - InterPro: IPR011234 - InterPro: IPR012690 [H]
Pfam domain/function: PF01557 FAA_hydrolase [H]
EC number: 4.2.1.-
Molecular weight: Translated: 29284; Mature: 29153
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTLDQINAAAARLHRAEQTRHQCGQISLDHPEMGMADAYAVQKAWVETKINEGRKVVG CEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHH HKIGLTSRAMQQSSQIDEPDYGTLLDDMVFGEGTDIPMARFIVPMVEVELAFILKDRLEG HHCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC PDVTLTQVLSATDYVIPALEIIDARCHRLDPETKRPRKVFDTISDNAANAGIVMGGRPVR CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCC PMDVDLRWVAAIMYRNGVIEETGVAAGVLNHPAHGISWLARKFAPHSIALEPGQVVLAGS CCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCEEEECCCCEEEECC FTRPVPARAGDTFHVDYGPLGAIACRFV CCCCCCCCCCCEEEECCCCHHHHHEECC >Mature Secondary Structure ALTLDQINAAAARLHRAEQTRHQCGQISLDHPEMGMADAYAVQKAWVETKINEGRKVVG EEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHH HKIGLTSRAMQQSSQIDEPDYGTLLDDMVFGEGTDIPMARFIVPMVEVELAFILKDRLEG HHCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC PDVTLTQVLSATDYVIPALEIIDARCHRLDPETKRPRKVFDTISDNAANAGIVMGGRPVR CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCC PMDVDLRWVAAIMYRNGVIEETGVAAGVLNHPAHGISWLARKFAPHSIALEPGQVVLAGS CCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCEEEECCCCEEEECC FTRPVPARAGDTFHVDYGPLGAIACRFV CCCCCCCCCCCEEEECCCCHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7737515 [H]