| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is 82750119
Identifier: 82750119
GI number: 82750119
Start: 398688
End: 399029
Strand: Direct
Name: 82750119
Synonym: SAB0358
Alternate gene names: NA
Gene position: 398688-399029 (Clockwise)
Preceding gene: 82750118
Following gene: 82750120
Centisome position: 14.54
GC content: 30.12
Gene sequence:
>342_bases ATGGATAAACAGCAAATAAAAGACTTCGTTTGTGATTATCATGAGCGAACTAGAAGTGATGTATTAATAGATGATGATAT AAATACTGATGAATTCTTTTCAATAGCTGATGAAAATTCCAATGAATGGATGGCAGACGATAACATTGATGATCATATTG TAAAGAATCACTTAGAAATGATTGTTGACCGAGTAGCTAATGATAAAGAGTTTTATATTTTTGATTCCCTTATACAAGGA CGTAGTTATCAAGATATTAGTGGTGTCTTAGATTGTTCAGAACAATCTGTAAGATTTTGGTATGAAACCTTATTAGATAA AATTGTAGAGGTGATAGAATGA
Upstream 100 bases:
>100_bases GTTCAGAACGTCAAAAACAAAGAAATATAGCAATTGAAAATAGCAAGATTGCACGAGTAAATGCTTATCATCAATCTTCA TATGTAAAAGTGGTGTAACA
Downstream 100 bases:
>100_bases GTGAGTTAACGGCAAAACAAGCGCGTTTTGTGAATGAGTATATTAGAACACTTAATGTTACACAAAGTGCTATAAAAGCG GGCTATAGTGCAAATAGCGC
Product: pathogenicity island protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MDKQQIKDFVCDYHERTRSDVLIDDDINTDEFFSIADENSNEWMADDNIDDHIVKNHLEMIVDRVANDKEFYIFDSLIQG RSYQDISGVLDCSEQSVRFWYETLLDKIVEVIE
Sequences:
>Translated_113_residues MDKQQIKDFVCDYHERTRSDVLIDDDINTDEFFSIADENSNEWMADDNIDDHIVKNHLEMIVDRVANDKEFYIFDSLIQG RSYQDISGVLDCSEQSVRFWYETLLDKIVEVIE >Mature_113_residues MDKQQIKDFVCDYHERTRSDVLIDDDINTDEFFSIADENSNEWMADDNIDDHIVKNHLEMIVDRVANDKEFYIFDSLIQG RSYQDISGVLDCSEQSVRFWYETLLDKIVEVIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13419; Mature: 13419
Theoretical pI: Translated: 3.90; Mature: 3.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKQQIKDFVCDYHERTRSDVLIDDDINTDEFFSIADENSNEWMADDNIDDHIVKNHLEM CCHHHHHHHHHHHHHHCCCCEEECCCCCCCHHEEECCCCCCCCCCCCCCHHHHHHHHHHH IVDRVANDKEFYIFDSLIQGRSYQDISGVLDCSEQSVRFWYETLLDKIVEVIE HHHHHCCCCHHEEHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MDKQQIKDFVCDYHERTRSDVLIDDDINTDEFFSIADENSNEWMADDNIDDHIVKNHLEM CCHHHHHHHHHHHHHHCCCCEEECCCCCCCHHEEECCCCCCCCCCCCCCHHHHHHHHHHH IVDRVANDKEFYIFDSLIQGRSYQDISGVLDCSEQSVRFWYETLLDKIVEVIE HHHHHCCCCHHEEHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA