| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is 82750118
Identifier: 82750118
GI number: 82750118
Start: 398110
End: 398685
Strand: Direct
Name: 82750118
Synonym: SAB0357
Alternate gene names: NA
Gene position: 398110-398685 (Clockwise)
Preceding gene: 82750117
Following gene: 82750119
Centisome position: 14.52
GC content: 32.29
Gene sequence:
>576_bases ATGATTGCCTATCCAATTCGGGTAGGCTCTGTTTATAGGGGTGAACAAATGAAACTGCTTAAAACGAAGAATTGTTTATA TTATCGTAATGGCGACAATAAACTATCTGAGTATCAACTATTAACGCAATTTAACCCAACTTTTATTAATAAAAAAATTA GGATGTGTGAATTCCAAATTGAAAGTATGTACCATATGAGTGCGTCGACCACAACATGTGATGAAATGATGGGGGTCGTG TCTGTCTCATATCCAATTGAAAAACTAGTTATCAAAATTATTGAAACAAAGGCAAGATTACAAAACTATAAAAATCGATC TATAAGTAATATGGTGTTGTTGAAAACGGTACTAAATCATTATACAGAAAAAGAGCAGAAGAAAGTTGTAAAATATATGC GTTCAAATGGACGATATAAGCCCTACAACGTCATTGAACGCTTACAGGTTGATTTGTATCAAGCAAGTATTAAACAACGT TCAGAACGTCAAAAACAAAGAAATATAGCAATTGAAAATAGCAAGATTGCACGAGTAAATGCTTATCATCAATCTTCATA TGTAAAAGTGGTGTAA
Upstream 100 bases:
>100_bases AGATTTCAAGTGAGTTACAACAAGCAGAACAGTCTAAGCAAAAGCAATATGGTACAACGCTACAAAATTTAGCTAAGCAA AACAGGATTATTAAATAGCA
Downstream 100 bases:
>100_bases CAATGGATAAACAGCAAATAAAAGACTTCGTTTGTGATTATCATGAGCGAACTAGAAGTGATGTATTAATAGATGATGAT ATAAATACTGATGAATTCTT
Product: pathogenicity island protein
Products: NA
Alternate protein names: Mobile Element-Associated Protein
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MIAYPIRVGSVYRGEQMKLLKTKNCLYYRNGDNKLSEYQLLTQFNPTFINKKIRMCEFQIESMYHMSASTTTCDEMMGVV SVSYPIEKLVIKIIETKARLQNYKNRSISNMVLLKTVLNHYTEKEQKKVVKYMRSNGRYKPYNVIERLQVDLYQASIKQR SERQKQRNIAIENSKIARVNAYHQSSYVKVV
Sequences:
>Translated_191_residues MIAYPIRVGSVYRGEQMKLLKTKNCLYYRNGDNKLSEYQLLTQFNPTFINKKIRMCEFQIESMYHMSASTTTCDEMMGVV SVSYPIEKLVIKIIETKARLQNYKNRSISNMVLLKTVLNHYTEKEQKKVVKYMRSNGRYKPYNVIERLQVDLYQASIKQR SERQKQRNIAIENSKIARVNAYHQSSYVKVV >Mature_191_residues MIAYPIRVGSVYRGEQMKLLKTKNCLYYRNGDNKLSEYQLLTQFNPTFINKKIRMCEFQIESMYHMSASTTTCDEMMGVV SVSYPIEKLVIKIIETKARLQNYKNRSISNMVLLKTVLNHYTEKEQKKVVKYMRSNGRYKPYNVIERLQVDLYQASIKQR SERQKQRNIAIENSKIARVNAYHQSSYVKVV
Specific function: Unknown
COG id: COG5577
COG function: function code M; Spore coat protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22575; Mature: 22575
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAYPIRVGSVYRGEQMKLLKTKNCLYYRNGDNKLSEYQLLTQFNPTFINKKIRMCEFQI CEEEEEEECCEECCCCEEEEECCCEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHH ESMYHMSASTTTCDEMMGVVSVSYPIEKLVIKIIETKARLQNYKNRSISNMVLLKTVLNH HHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH YTEKEQKKVVKYMRSNGRYKPYNVIERLQVDLYQASIKQRSERQKQRNIAIENSKIARVN HCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCEEEEE AYHQSSYVKVV EECCCCEEEEC >Mature Secondary Structure MIAYPIRVGSVYRGEQMKLLKTKNCLYYRNGDNKLSEYQLLTQFNPTFINKKIRMCEFQI CEEEEEEECCEECCCCEEEEECCCEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHH ESMYHMSASTTTCDEMMGVVSVSYPIEKLVIKIIETKARLQNYKNRSISNMVLLKTVLNH HHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH YTEKEQKKVVKYMRSNGRYKPYNVIERLQVDLYQASIKQRSERQKQRNIAIENSKIARVN HCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCEEEEE AYHQSSYVKVV EECCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA