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The map label for this gene is ybjT [H]

Identifier: 82703565

GI number: 82703565

Start: 2800724

End: 2801662

Strand: Direct

Name: ybjT [H]

Synonym: Nmul_A2450

Alternate gene names: 82703565

Gene position: 2800724-2801662 (Clockwise)

Preceding gene: 82703564

Following gene: 82703566

Centisome position: 87.96

GC content: 54.95

Gene sequence:

>939_bases
ATGACATTCAAGAATATCTGCATTTTCGGCGGCAGTGGCTTTGTCGGGAAACATCTCGCAAATCTCCTGACCAACCGGGA
AATCTACCTGCGTATTCCCACACGAAACTACGAGCGTGCAAAGGAGTTGCTGGAGATACCCACTACCGACCTGATCGAGG
CCGACATCTACGACGATAGGGACCTCGACCGGCTGCTCCTCGGCATCGATGCCGTGATCAACCTGGTAGGCGTGTTGCAG
GGTGACTTTCATGCTGTCCATGTGGAGCTTCCGCAAAAGATCATCGCAGCCTGTAAACGCAATGGCATTACCCGGATACT
GCATATGAGCGCTCTGAAGGCCGGGCCCGGTCAACCGAGCGAGTATTTGCGCTCGAAGGGAGAGGGAGAACAGATCGTAA
GGACATCCGGGATGGATGCAACCGTTTTCAGGCCGTCAGTTATATTTGGTCCGGGCGACTCCTCGATCAATCTTTTTGCC
AGACTGGGACGTCTGCCGGTTTTACCGCTGGCCTCACCTCATGCGAAATTCCAGCCGATCTTCGTCATGGATGTCGTGCA
GGCGTTTGCGCTCAGCCTGGATGAGCCGCGTACTTTCGGACGAAGCTACGACCTGTGCGGACCGAAGTGCTACAGCCTGC
GCGAACTGGTGGAGTATGCGGCACATGTGACGGGACATGACCCTGCCATCATCGGGCTGGGAGATGCCCTTTCCCACCTC
GAAGCAGCAGTGATGGAGATACTGCCAGGCAAACTGATGAGCGTCGATAATTACTATTCGATGAAGATCGACAGCGTGTG
CGACTGCGATAGTCCCGAGGCACTACTGGAAGTCTGGGGAATCCCTCCTACGGCACTTGAAGAAGCAGCACCGATATATC
TGAAACATCAGTTGCCCCGTGAACGTTACAACTATCTGCGGCATTGGTCCGGGCGTTGA

Upstream 100 bases:

>100_bases
GCCCGCAACTTCGGGCATCAGGTCAAGGCGCTGAAGCAGCGCCTGGGTATTGTCTCGTCCCGATTCGGGAGTGAAAAAGT
GTCGGAGTGAGGGGTCTGAC

Downstream 100 bases:

>100_bases
GATAGATTCATACAGATAATTCCGGAATGAAAACCTACCTGGTGGGCGGCTCCGTGCGTGACGAGATACTGGGGCTGCCC
GTAACGGATCACGATTATGT

Product: NAD-dependent epimerase/dehydratase

Products: NAD+; ubiquinol

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MTFKNICIFGGSGFVGKHLANLLTNREIYLRIPTRNYERAKELLEIPTTDLIEADIYDDRDLDRLLLGIDAVINLVGVLQ
GDFHAVHVELPQKIIAACKRNGITRILHMSALKAGPGQPSEYLRSKGEGEQIVRTSGMDATVFRPSVIFGPGDSSINLFA
RLGRLPVLPLASPHAKFQPIFVMDVVQAFALSLDEPRTFGRSYDLCGPKCYSLRELVEYAAHVTGHDPAIIGLGDALSHL
EAAVMEILPGKLMSVDNYYSMKIDSVCDCDSPEALLEVWGIPPTALEEAAPIYLKHQLPRERYNYLRHWSGR

Sequences:

>Translated_312_residues
MTFKNICIFGGSGFVGKHLANLLTNREIYLRIPTRNYERAKELLEIPTTDLIEADIYDDRDLDRLLLGIDAVINLVGVLQ
GDFHAVHVELPQKIIAACKRNGITRILHMSALKAGPGQPSEYLRSKGEGEQIVRTSGMDATVFRPSVIFGPGDSSINLFA
RLGRLPVLPLASPHAKFQPIFVMDVVQAFALSLDEPRTFGRSYDLCGPKCYSLRELVEYAAHVTGHDPAIIGLGDALSHL
EAAVMEILPGKLMSVDNYYSMKIDSVCDCDSPEALLEVWGIPPTALEEAAPIYLKHQLPRERYNYLRHWSGR
>Mature_311_residues
TFKNICIFGGSGFVGKHLANLLTNREIYLRIPTRNYERAKELLEIPTTDLIEADIYDDRDLDRLLLGIDAVINLVGVLQG
DFHAVHVELPQKIIAACKRNGITRILHMSALKAGPGQPSEYLRSKGEGEQIVRTSGMDATVFRPSVIFGPGDSSINLFAR
LGRLPVLPLASPHAKFQPIFVMDVVQAFALSLDEPRTFGRSYDLCGPKCYSLRELVEYAAHVTGHDPAIIGLGDALSHLE
AAVMEILPGKLMSVDNYYSMKIDSVCDCDSPEALLEVWGIPPTALEEAAPIYLKHQLPRERYNYLRHWSGR

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6681764, Length=306, Percent_Identity=30.0653594771242, Blast_Score=115, Evalue=7e-26,
Organism=Escherichia coli, GI87081793, Length=226, Percent_Identity=24.7787610619469, Blast_Score=77, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17556106, Length=235, Percent_Identity=28.936170212766, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24667554, Length=233, Percent_Identity=31.7596566523605, Blast_Score=99, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: 1.6.5.3; 1.6.99.3

Molecular weight: Translated: 34656; Mature: 34525

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFKNICIFGGSGFVGKHLANLLTNREIYLRIPTRNYERAKELLEIPTTDLIEADIYDDR
CCCCCEEEECCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCHHHEECCCCCCC
DLDRLLLGIDAVINLVGVLQGDFHAVHVELPQKIIAACKRNGITRILHMSALKAGPGQPS
CHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCH
EYLRSKGEGEQIVRTSGMDATVFRPSVIFGPGDSSINLFARLGRLPVLPLASPHAKFQPI
HHHHCCCCCCCEEEECCCCEEEECCEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCH
FVMDVVQAFALSLDEPRTFGRSYDLCGPKCYSLRELVEYAAHVTGHDPAIIGLGDALSHL
HHHHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHH
EAAVMEILPGKLMSVDNYYSMKIDSVCDCDSPEALLEVWGIPPTALEEAAPIYLKHQLPR
HHHHHHHCCCCCEECCCEEEEEECCCCCCCCHHHHHHHCCCCHHHHHHCCCEEEHHCCCH
ERYNYLRHWSGR
HHHHHHHHCCCC
>Mature Secondary Structure 
TFKNICIFGGSGFVGKHLANLLTNREIYLRIPTRNYERAKELLEIPTTDLIEADIYDDR
CCCCEEEECCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCHHHEECCCCCCC
DLDRLLLGIDAVINLVGVLQGDFHAVHVELPQKIIAACKRNGITRILHMSALKAGPGQPS
CHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCH
EYLRSKGEGEQIVRTSGMDATVFRPSVIFGPGDSSINLFARLGRLPVLPLASPHAKFQPI
HHHHCCCCCCCEEEECCCCEEEECCEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCH
FVMDVVQAFALSLDEPRTFGRSYDLCGPKCYSLRELVEYAAHVTGHDPAIIGLGDALSHL
HHHHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHH
EAAVMEILPGKLMSVDNYYSMKIDSVCDCDSPEALLEVWGIPPTALEEAAPIYLKHQLPR
HHHHHHHCCCCCEECCCEEEEEECCCCCCCCHHHHHHHCCCCHHHHHHCCCEEEHHCCCH
ERYNYLRHWSGR
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]