| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is 82703531
Identifier: 82703531
GI number: 82703531
Start: 2752821
End: 2753867
Strand: Direct
Name: 82703531
Synonym: Nmul_A2416
Alternate gene names: NA
Gene position: 2752821-2753867 (Clockwise)
Preceding gene: 82703530
Following gene: 82703532
Centisome position: 86.45
GC content: 56.45
Gene sequence:
>1047_bases ATGAATCTGCACTTGCTGGTACCGGCGCTCTTCTGGCCAGACCCGGCGCTTCCTGAAATCTACCGTGATCTACCCCTGCC CGGCCTGGAGAATCTGCTGGCAAAATGTTCCGTCACGAAAGATAAATCGGAGGGGATAGAGGCGTGGCTTTGCCGCGCTT TCGGCGCCGCGAAGCAGCAGGATTGGCCGGTTGCGCCCATTACCCTGCAAACCGATCGCGCAGAGGACGGAGAGGCGGCA ACAACGGAAAACAATCGCTGGCTCCGTGCCGACCCGGTACATTTACGCCTTGAGCGCGACCATATCCTTTTGGCCGACAG CCATGTTTTTCGCATTTCATCGGAAGAAGCCAAGCAGTTCACCGACCTGCTGAACCGCCATTTTGCCGGAAATCAGGGGA TAAGCTTCTCCCCCCTAAGACCGGACCGCTGGTATCTCCGCCTGCTGGAACCGCCCTTGCCCCATACCCATTTACTTAGT GAAGTTGTAAACCGGGATATCCGGAACAAGCTGCCCTTCGGTGCGAACAACACCTTCTGGCGCAGTCTGACCAATGAAAT TCAGATGTTGCTGCACGAACATCCTCTGAATCAGATGCGCGAGGCGCGTGGAGAGCTTGCGATCAACAGCGTCTGGTTCT GGGGAGGGGGGACGCTGCCTGAATCCCTTGTTTCGCCCTATACGAATGTCTGGAGCAACGACGTTCTGGCAGTTTCGCTG GCCTCGGCATGTAATATCGATCACGCTCCGCTTCCCGTCGACGCAACGATGTGGGAGACCTCTGCCAGGACCGGCAGGCA TCTGGTGGTGCTGGATGAATTACAGGGAAGAGCCCAATATCGGGACGCGTACGGCTGGCGCGAAAGCATCAAAGAAATGG AGCGACGCTGGTTTGACCCCCTATGGAGGATGTTCAGGCGCGGACACTTCGATGAAATAACGTTCACGGCGCCAGATGAA AGCAGCAGCAAAAGCTTCACTGCGACACGAAGCGATTCGCGGAAATTCTGGCGCAGGCCCAAGCCTATCCTGATTTATGG AAAGTGA
Upstream 100 bases:
>100_bases GCCTTTCCATTTGCCGTTTCTGGGCTGTTTCGGTTCTATTTCTGCCACGCTTTCCACACGTTTGATATTATCCGCCTAAG TTGCCCTGAATGCCTGAATA
Downstream 100 bases:
>100_bases CAGGGGAATGCTCCGAAATGCGCCTCTTTTTGCCGTCTTTTCCTCCTTTCGAAAAAGCCGATATTACACATAATGTCTCC ACCTGCCTGTAAAATAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide Protein; Regulatory Protein; Regulatory Protein RpfE; Regulatory Protein Rpfe
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MNLHLLVPALFWPDPALPEIYRDLPLPGLENLLAKCSVTKDKSEGIEAWLCRAFGAAKQQDWPVAPITLQTDRAEDGEAA TTENNRWLRADPVHLRLERDHILLADSHVFRISSEEAKQFTDLLNRHFAGNQGISFSPLRPDRWYLRLLEPPLPHTHLLS EVVNRDIRNKLPFGANNTFWRSLTNEIQMLLHEHPLNQMREARGELAINSVWFWGGGTLPESLVSPYTNVWSNDVLAVSL ASACNIDHAPLPVDATMWETSARTGRHLVVLDELQGRAQYRDAYGWRESIKEMERRWFDPLWRMFRRGHFDEITFTAPDE SSSKSFTATRSDSRKFWRRPKPILIYGK
Sequences:
>Translated_348_residues MNLHLLVPALFWPDPALPEIYRDLPLPGLENLLAKCSVTKDKSEGIEAWLCRAFGAAKQQDWPVAPITLQTDRAEDGEAA TTENNRWLRADPVHLRLERDHILLADSHVFRISSEEAKQFTDLLNRHFAGNQGISFSPLRPDRWYLRLLEPPLPHTHLLS EVVNRDIRNKLPFGANNTFWRSLTNEIQMLLHEHPLNQMREARGELAINSVWFWGGGTLPESLVSPYTNVWSNDVLAVSL ASACNIDHAPLPVDATMWETSARTGRHLVVLDELQGRAQYRDAYGWRESIKEMERRWFDPLWRMFRRGHFDEITFTAPDE SSSKSFTATRSDSRKFWRRPKPILIYGK >Mature_348_residues MNLHLLVPALFWPDPALPEIYRDLPLPGLENLLAKCSVTKDKSEGIEAWLCRAFGAAKQQDWPVAPITLQTDRAEDGEAA TTENNRWLRADPVHLRLERDHILLADSHVFRISSEEAKQFTDLLNRHFAGNQGISFSPLRPDRWYLRLLEPPLPHTHLLS EVVNRDIRNKLPFGANNTFWRSLTNEIQMLLHEHPLNQMREARGELAINSVWFWGGGTLPESLVSPYTNVWSNDVLAVSL ASACNIDHAPLPVDATMWETSARTGRHLVVLDELQGRAQYRDAYGWRESIKEMERRWFDPLWRMFRRGHFDEITFTAPDE SSSKSFTATRSDSRKFWRRPKPILIYGK
Specific function: Unknown
COG id: COG4255
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40181; Mature: 40181
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLHLLVPALFWPDPALPEIYRDLPLPGLENLLAKCSVTKDKSEGIEAWLCRAFGAAKQQ CCEEEEEHHHHCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC DWPVAPITLQTDRAEDGEAATTENNRWLRADPVHLRLERDHILLADSHVFRISSEEAKQF CCCCCEEEEECCCCCCCCCCCCCCCCEEEECCEEEEEECCEEEEECCEEEEECHHHHHHH TDLLNRHFAGNQGISFSPLRPDRWYLRLLEPPLPHTHLLSEVVNRDIRNKLPFGANNTFW HHHHHHHCCCCCCCCCCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHH RSLTNEIQMLLHEHPLNQMREARGELAINSVWFWGGGTLPESLVSPYTNVWSNDVLAVSL HHHHHHHHHHHHHCCHHHHHHHHCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEH ASACNIDHAPLPVDATMWETSARTGRHLVVLDELQGRAQYRDAYGWRESIKEMERRWFDP HHHCCCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH LWRMFRRGHFDEITFTAPDESSSKSFTATRSDSRKFWRRPKPILIYGK HHHHHHCCCCCCEEEECCCCCCCCCEEECCCCCHHHHCCCCCEEEECC >Mature Secondary Structure MNLHLLVPALFWPDPALPEIYRDLPLPGLENLLAKCSVTKDKSEGIEAWLCRAFGAAKQQ CCEEEEEHHHHCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC DWPVAPITLQTDRAEDGEAATTENNRWLRADPVHLRLERDHILLADSHVFRISSEEAKQF CCCCCEEEEECCCCCCCCCCCCCCCCEEEECCEEEEEECCEEEEECCEEEEECHHHHHHH TDLLNRHFAGNQGISFSPLRPDRWYLRLLEPPLPHTHLLSEVVNRDIRNKLPFGANNTFW HHHHHHHCCCCCCCCCCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHH RSLTNEIQMLLHEHPLNQMREARGELAINSVWFWGGGTLPESLVSPYTNVWSNDVLAVSL HHHHHHHHHHHHHCCHHHHHHHHCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEH ASACNIDHAPLPVDATMWETSARTGRHLVVLDELQGRAQYRDAYGWRESIKEMERRWFDP HHHCCCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH LWRMFRRGHFDEITFTAPDESSSKSFTATRSDSRKFWRRPKPILIYGK HHHHHHCCCCCCEEEECCCCCCCCCEEECCCCCHHHHCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA