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The map label for this gene is ywhC [H]

Identifier: 82703433

GI number: 82703433

Start: 2634367

End: 2635017

Strand: Direct

Name: ywhC [H]

Synonym: Nmul_A2316

Alternate gene names: 82703433

Gene position: 2634367-2635017 (Clockwise)

Preceding gene: 82703432

Following gene: 82703434

Centisome position: 82.73

GC content: 55.61

Gene sequence:

>651_bases
ATGGATAGCATTATCCAGAGCATAGCCATTTATGCGCTTCCGGTCATTTTTGCCATCACGCTGCATGAAGCTGCACACGG
TTATGTGGCCAAGCATTTCGGCGATCTCACCGCCTATACGCAGGGGCGCGTCAGCCTTAATCCCATACGCCATATCGACC
CGCTGGGGACCATCGTTCTGCCGATCGTGACGATGCTGCTCGGGGGAATCCTGTTCGGCTGGGCCAAGCCGGTGCCAGTC
AACTTCTCCGCGTTGCGCAATCCCAAGCAGGACATGATGTGGGTGGCACTCGCCGGGCCGGGCGCCAATCTCTTCATGGC
AATACTTTGGGGATTCGTCATCAAGTTTGCTCTCGGGTTGCCACAGGACGGACTGGCCGAACCCCTGATATTGATGGGTG
AGGCAGGAATCAAAATCAACGTCGTGCTGATGGTGCTGAATCTCTTGCCTCTGCCACCGCTCGATGGAGGCCGGGTTGCG
GTAAGCCTGCTGCCGCCCCGCCTGGCCTATAATTTTTCGAAGATCGAGCCTTACGGCTTCATGATCCTTTTGTTTCTGCT
GGCGACGGGCGTACTCGGGGCTGTTATGGGACCGCTGATTGCAATCACGATCCATTTGATGGCGTTGTTTTTTGGTTTCG
CTACTTATTGA

Upstream 100 bases:

>100_bases
GCCTGCGGCCTGGAGATGAGCACGGTGGTTGATCTGACCGGGGATACGCCTGTGGTAGTCCGGCAAGGCAAAGGTAGCCT
CGCACCCTTTGGAATGCCGA

Downstream 100 bases:

>100_bases
ACTGCTTCTCTACATAAGGATTCTGATTGGAGTTACCGAGGCAATGATCTATGTTCGCTGATCGTGTTTTGTCGGGAATG
CGGCCGACGGGAGGCCTGCA

Product: peptidase M50

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MDSIIQSIAIYALPVIFAITLHEAAHGYVAKHFGDLTAYTQGRVSLNPIRHIDPLGTIVLPIVTMLLGGILFGWAKPVPV
NFSALRNPKQDMMWVALAGPGANLFMAILWGFVIKFALGLPQDGLAEPLILMGEAGIKINVVLMVLNLLPLPPLDGGRVA
VSLLPPRLAYNFSKIEPYGFMILLFLLATGVLGAVMGPLIAITIHLMALFFGFATY

Sequences:

>Translated_216_residues
MDSIIQSIAIYALPVIFAITLHEAAHGYVAKHFGDLTAYTQGRVSLNPIRHIDPLGTIVLPIVTMLLGGILFGWAKPVPV
NFSALRNPKQDMMWVALAGPGANLFMAILWGFVIKFALGLPQDGLAEPLILMGEAGIKINVVLMVLNLLPLPPLDGGRVA
VSLLPPRLAYNFSKIEPYGFMILLFLLATGVLGAVMGPLIAITIHLMALFFGFATY
>Mature_216_residues
MDSIIQSIAIYALPVIFAITLHEAAHGYVAKHFGDLTAYTQGRVSLNPIRHIDPLGTIVLPIVTMLLGGILFGWAKPVPV
NFSALRNPKQDMMWVALAGPGANLFMAILWGFVIKFALGLPQDGLAEPLILMGEAGIKINVVLMVLNLLPLPPLDGGRVA
VSLLPPRLAYNFSKIEPYGFMILLFLLATGVLGAVMGPLIAITIHLMALFFGFATY

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 23274; Mature: 23274

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSIIQSIAIYALPVIFAITLHEAAHGYVAKHFGDLTAYTQGRVSLNPIRHIDPLGTIVL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHCCHHHHHHH
PIVTMLLGGILFGWAKPVPVNFSALRNPKQDMMWVALAGPGANLFMAILWGFVIKFALGL
HHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHEEEEEEECCCHHHHHHHHHHHHHHHHHCC
PQDGLAEPLILMGEAGIKINVVLMVLNLLPLPPLDGGRVAVSLLPPRLAYNFSKIEPYGF
CCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHCCCCCCCHHHH
MILLFLLATGVLGAVMGPLIAITIHLMALFFGFATY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDSIIQSIAIYALPVIFAITLHEAAHGYVAKHFGDLTAYTQGRVSLNPIRHIDPLGTIVL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHCCHHHHHHH
PIVTMLLGGILFGWAKPVPVNFSALRNPKQDMMWVALAGPGANLFMAILWGFVIKFALGL
HHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHEEEEEEECCCHHHHHHHHHHHHHHHHHCC
PQDGLAEPLILMGEAGIKINVVLMVLNLLPLPPLDGGRVAVSLLPPRLAYNFSKIEPYGF
CCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHCCCCCCCHHHH
MILLFLLATGVLGAVMGPLIAITIHLMALFFGFATY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]