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The map label for this gene is yciO [H]

Identifier: 82703432

GI number: 82703432

Start: 2633742

End: 2634374

Strand: Direct

Name: yciO [H]

Synonym: Nmul_A2315

Alternate gene names: 82703432

Gene position: 2633742-2634374 (Clockwise)

Preceding gene: 82703431

Following gene: 82703433

Centisome position: 82.71

GC content: 59.72

Gene sequence:

>633_bases
GTGGCCCAATTCTTTTCCATTCACCCCGATAATCCCCAGCCGCGGCTGATACGGCAGACTGCGGCCATCGTGCGGGCGGG
GGGCGTGATCGTATGTCCGACTGATTCCTGTTACGCGCTGGGGGGGCAGCTGGGCGACAAGAACGTCATGAGCCGTATTC
GCGCACTGCGCGGAGTGGATGAGGATCACCATTTCACCCTCATGTGCCGGGACTTTACGGAAATCTCGCGCTACGCCAAA
TTCGATAACACCGAATACCGGTTGCTCAGGGCCTGCACCCCGGGTTGCTACACATTTATCTTTCAGGCTACCCGGGAGGT
GCCGCGGCGCCTGCTGCATCCCAGGCGCAATACGATCGGTATGAGAATTCCGGACCAGGCTGTCGTCCAGGCACTGCTGG
CGGAACTGAATGAACCCCTGCTGAGCTCTACCCTGATACTGCCGGGGGAGGCGCTTCCACTTAACGATCCTCTGGAAATC
CGTGCACGTCTCGAGCATCAGGTGGAGCTGATACTGGATAGCGGCGCCTGCGGCCTGGAGATGAGCACGGTGGTTGATCT
GACCGGGGATACGCCTGTGGTAGTCCGGCAAGGCAAAGGTAGCCTCGCACCCTTTGGAATGCCGAATGGATAG

Upstream 100 bases:

>100_bases
TGCCCCTGTCTGGCATGACTGGTCCGGGCTGATGTAAGGCGAAAATCGCGTCCACTTTTTATGAGAGCGGCATTCCAAAA
ATTCAAATTTCTGTTGCTAC

Downstream 100 bases:

>100_bases
CATTATCCAGAGCATAGCCATTTATGCGCTTCCGGTCATTTTTGCCATCACGCTGCATGAAGCTGCACACGGTTATGTGG
CCAAGCATTTCGGCGATCTC

Product: Sua5/YciO/YrdC/YwlC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MAQFFSIHPDNPQPRLIRQTAAIVRAGGVIVCPTDSCYALGGQLGDKNVMSRIRALRGVDEDHHFTLMCRDFTEISRYAK
FDNTEYRLLRACTPGCYTFIFQATREVPRRLLHPRRNTIGMRIPDQAVVQALLAELNEPLLSSTLILPGEALPLNDPLEI
RARLEHQVELILDSGACGLEMSTVVDLTGDTPVVVRQGKGSLAPFGMPNG

Sequences:

>Translated_210_residues
MAQFFSIHPDNPQPRLIRQTAAIVRAGGVIVCPTDSCYALGGQLGDKNVMSRIRALRGVDEDHHFTLMCRDFTEISRYAK
FDNTEYRLLRACTPGCYTFIFQATREVPRRLLHPRRNTIGMRIPDQAVVQALLAELNEPLLSSTLILPGEALPLNDPLEI
RARLEHQVELILDSGACGLEMSTVVDLTGDTPVVVRQGKGSLAPFGMPNG
>Mature_209_residues
AQFFSIHPDNPQPRLIRQTAAIVRAGGVIVCPTDSCYALGGQLGDKNVMSRIRALRGVDEDHHFTLMCRDFTEISRYAKF
DNTEYRLLRACTPGCYTFIFQATREVPRRLLHPRRNTIGMRIPDQAVVQALLAELNEPLLSSTLILPGEALPLNDPLEIR
ARLEHQVELILDSGACGLEMSTVVDLTGDTPVVVRQGKGSLAPFGMPNG

Specific function: Unknown

COG id: COG0009

COG function: function code J; Putative translation factor (SUA5)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YrdC-like domain [H]

Homologues:

Organism=Escherichia coli, GI87081864, Length=205, Percent_Identity=57.0731707317073, Blast_Score=244, Evalue=4e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017945
- InterPro:   IPR004388
- InterPro:   IPR006070 [H]

Pfam domain/function: PF01300 Sua5_yciO_yrdC [H]

EC number: NA

Molecular weight: Translated: 23225; Mature: 23094

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: PS51163 YRDC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQFFSIHPDNPQPRLIRQTAAIVRAGGVIVCPTDSCYALGGQLGDKNVMSRIRALRGVD
CCCEEECCCCCCCHHHHHHHHHHHHCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHCCC
EDHHFTLMCRDFTEISRYAKFDNTEYRLLRACTPGCYTFIFQATREVPRRLLHPRRNTIG
CCCEEEEEECCHHHHHHHHHCCCCHHHHEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
MRIPDQAVVQALLAELNEPLLSSTLILPGEALPLNDPLEIRARLEHQVELILDSGACGLE
CCCCHHHHHHHHHHHHCCHHHHCEEECCCCCCCCCCHHHHHHHHHHEEEEEEECCCCCEE
MSTVVDLTGDTPVVVRQGKGSLAPFGMPNG
EEEEEEECCCCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
AQFFSIHPDNPQPRLIRQTAAIVRAGGVIVCPTDSCYALGGQLGDKNVMSRIRALRGVD
CCEEECCCCCCCHHHHHHHHHHHHCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHCCC
EDHHFTLMCRDFTEISRYAKFDNTEYRLLRACTPGCYTFIFQATREVPRRLLHPRRNTIG
CCCEEEEEECCHHHHHHHHHCCCCHHHHEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
MRIPDQAVVQALLAELNEPLLSSTLILPGEALPLNDPLEIRARLEHQVELILDSGACGLE
CCCCHHHHHHHHHHHHCCHHHHCEEECCCCCCCCCCHHHHHHHHHHEEEEEEECCCCCEE
MSTVVDLTGDTPVVVRQGKGSLAPFGMPNG
EEEEEEECCCCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]