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The map label for this gene is rimP

Identifier: 82702987

GI number: 82702987

Start: 2152724

End: 2153152

Strand: Reverse

Name: rimP

Synonym: Nmul_A1866

Alternate gene names: 82702987

Gene position: 2153152-2152724 (Counterclockwise)

Preceding gene: 82702991

Following gene: 82702986

Centisome position: 67.62

GC content: 50.82

Gene sequence:

>429_bases
ATGGATCTGTACGAATTGCTCGAACCGACCCTTGCAGGACTGGGTTATGAACTGGTTGACCTGGAGCGGTCGCCGGGGGG
AAAGCTGTTGCGGATATTCATCGACAAGCCCGGTGGTGTGAATGTGGATGATTGCGTGACTGTCAGTAATCATCTGAGCC
GGTTTCTCGCCGTCGAGAACGTGGACTATGACAGACTGGAAGTATCTTCGCCGGGTCTAGATCGGCCGCTGAAAAAGACA
GCGGATTTTATCCGCTTTGCGGGAGAGTCCGTTAAACTCAGGCTGCGGGTGGCGTTACAGGGGCAAAGAAATTTTGTCGG
CATTTTGCGCGAAGTGAAGGACGGAATTTTAAAACTGGAAGTAGATGGAAAAATGCTGGACCTTGAACTCACTAACCTTG
AGAAGGTTCGCCTCGTTCCGAAATTGTAA

Upstream 100 bases:

>100_bases
AAGCGGAACTCAGTTCCTATTTCCCCTATCATAAATGTTTGTTAAAATAGAATAATAACGATGGGCTTCTTTCAGCCCAT
TTTTTGTTTGTATCGGCACT

Downstream 100 bases:

>100_bases
TCTATGAGTAACTGGCTGGAGGTAACATGAGCCGCGAGGTTTTGCTATTGGTGGATGCACTGGCGCGCGAAAAGAATGTG
GAAAAGAACATTGTTTTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MDLYELLEPTLAGLGYELVDLERSPGGKLLRIFIDKPGGVNVDDCVTVSNHLSRFLAVENVDYDRLEVSSPGLDRPLKKT
ADFIRFAGESVKLRLRVALQGQRNFVGILREVKDGILKLEVDGKMLDLELTNLEKVRLVPKL

Sequences:

>Translated_142_residues
MDLYELLEPTLAGLGYELVDLERSPGGKLLRIFIDKPGGVNVDDCVTVSNHLSRFLAVENVDYDRLEVSSPGLDRPLKKT
ADFIRFAGESVKLRLRVALQGQRNFVGILREVKDGILKLEVDGKMLDLELTNLEKVRLVPKL
>Mature_142_residues
MDLYELLEPTLAGLGYELVDLERSPGGKLLRIFIDKPGGVNVDDCVTVSNHLSRFLAVENVDYDRLEVSSPGLDRPLKKT
ADFIRFAGESVKLRLRVALQGQRNFVGILREVKDGILKLEVDGKMLDLELTNLEKVRLVPKL

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=144, Percent_Identity=43.0555555555556, Blast_Score=108, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_NITMU (Q2Y7W0)

Other databases:

- EMBL:   CP000103
- RefSeq:   YP_412553.1
- ProteinModelPortal:   Q2Y7W0
- SMR:   Q2Y7W0
- STRING:   Q2Y7W0
- GeneID:   3786516
- GenomeReviews:   CP000103_GR
- KEGG:   nmu:Nmul_A1866
- eggNOG:   COG0779
- HOGENOM:   HBG668072
- OMA:   VMDVEDP
- PhylomeDB:   Q2Y7W0
- ProtClustDB:   PRK00092
- BioCyc:   NMUL323848:NMUL_A1866-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 15919; Mature: 15919

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLYELLEPTLAGLGYELVDLERSPGGKLLRIFIDKPGGVNVDDCVTVSNHLSRFLAVEN
CCHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCC
VDYDRLEVSSPGLDRPLKKTADFIRFAGESVKLRLRVALQGQRNFVGILREVKDGILKLE
CCCCEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHCCEEEEE
VDGKMLDLELTNLEKVRLVPKL
ECCEEEEEEECCCEEEEECCCC
>Mature Secondary Structure
MDLYELLEPTLAGLGYELVDLERSPGGKLLRIFIDKPGGVNVDDCVTVSNHLSRFLAVEN
CCHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCC
VDYDRLEVSSPGLDRPLKKTADFIRFAGESVKLRLRVALQGQRNFVGILREVKDGILKLE
CCCCEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHCCEEEEE
VDGKMLDLELTNLEKVRLVPKL
ECCEEEEEEECCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA