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The map label for this gene is ywdK [H]

Identifier: 82702160

GI number: 82702160

Start: 1192972

End: 1193349

Strand: Direct

Name: ywdK [H]

Synonym: Nmul_A1031

Alternate gene names: 82702160

Gene position: 1192972-1193349 (Clockwise)

Preceding gene: 82702159

Following gene: 82702161

Centisome position: 37.46

GC content: 56.35

Gene sequence:

>378_bases
ATGTCTCCAAAAATCTTTCTCACGCTGGGCGCAGTCAATGCATTTCTCTGCGTCGCTTTGGGTGCGTTCGGCGCGCACGG
CCTGAAGCAGACGCTCTCCGCTGATATGCTGGCCGTATACCAGACCGGTGTGCAGTATCATTTTTATCATGCGCTCGGCC
TTATCGCAGTGGGTCTCGTGCTGTTTCAGTTTCCCGCTTCCAAATGGGTGGCGTTATCCGGATGGCTGATGTGTGCCGGA
ATTGTTCTGTTTTCTGCCAGTCTTTATGCGCTGAGCCTCACGGGCATACGCGGACTTGGCGCCATCACCCCATTGGGCGG
CGTGTCATTCCTCACAGCGTGGGCCCTGCTTGCCTACGGCTCGTGGACAGCAAGATAA

Upstream 100 bases:

>100_bases
GATAAAAAGACGTTATGGAGATAGTTGCCATTCAATTCCGTTTATATGTTTCTGCCACTGATCTCTGCCACTGAATCCTA
TCAGCTCTTTCCACAAAAAT

Downstream 100 bases:

>100_bases
ACCCATTTTTGCGAGTATCCGGGGATCAGGTTCCCCTGATATCGTGACCCGCCTGCATTCTGTCATCCTGTGACGCTTCA
TCATTTTTTTGCTCCCTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MSPKIFLTLGAVNAFLCVALGAFGAHGLKQTLSADMLAVYQTGVQYHFYHALGLIAVGLVLFQFPASKWVALSGWLMCAG
IVLFSASLYALSLTGIRGLGAITPLGGVSFLTAWALLAYGSWTAR

Sequences:

>Translated_125_residues
MSPKIFLTLGAVNAFLCVALGAFGAHGLKQTLSADMLAVYQTGVQYHFYHALGLIAVGLVLFQFPASKWVALSGWLMCAG
IVLFSASLYALSLTGIRGLGAITPLGGVSFLTAWALLAYGSWTAR
>Mature_124_residues
SPKIFLTLGAVNAFLCVALGAFGAHGLKQTLSADMLAVYQTGVQYHFYHALGLIAVGLVLFQFPASKWVALSGWLMCAGI
VLFSASLYALSLTGIRGLGAITPLGGVSFLTAWALLAYGSWTAR

Specific function: Unknown

COG id: COG2363

COG function: function code S; Uncharacterized small membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0382 family [H]

Homologues:

Organism=Escherichia coli, GI1789172, Length=121, Percent_Identity=40.495867768595, Blast_Score=85, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI193203406, Length=116, Percent_Identity=31.8965517241379, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006696 [H]

Pfam domain/function: PF04241 DUF423 [H]

EC number: NA

Molecular weight: Translated: 13143; Mature: 13012

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPKIFLTLGAVNAFLCVALGAFGAHGLKQTLSADMLAVYQTGVQYHFYHALGLIAVGLV
CCCEEEEEHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LFQFPASKWVALSGWLMCAGIVLFSASLYALSLTGIRGLGAITPLGGVSFLTAWALLAYG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHC
SWTAR
CCCCC
>Mature Secondary Structure 
SPKIFLTLGAVNAFLCVALGAFGAHGLKQTLSADMLAVYQTGVQYHFYHALGLIAVGLV
CCEEEEEHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LFQFPASKWVALSGWLMCAGIVLFSASLYALSLTGIRGLGAITPLGGVSFLTAWALLAYG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHC
SWTAR
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]