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The map label for this gene is sdhD [H]

Identifier: 82701991

GI number: 82701991

Start: 981523

End: 981885

Strand: Reverse

Name: sdhD [H]

Synonym: Nmul_A0862

Alternate gene names: 82701991

Gene position: 981885-981523 (Counterclockwise)

Preceding gene: 82701992

Following gene: 82701990

Centisome position: 30.84

GC content: 54.55

Gene sequence:

>363_bases
ATGGTAAAGCGTCCAGTGCGGGCGATAACCGGGGCGCATTACGGGCTTCGCGACTGGCTGGCGCAACGCGTCACCGCCGC
GGTAATGGCCATCTATATCCTGATGCTGGCAGGGGTGCTGCTGGTTTCCCCCCCGCAGGACTACGCGTCCTTCAAGACAC
TGTTCGATAACCAGTGGATGCGGGTAGCATCCTTCCTGTTTCTTCTGAGCCTGTTCTGGCATGCATGGATCGGAATGCGC
AACATACTGATGGATTACGTTCATCCTGCTGGTATCCGCCTCATTCTGGAAATACTGGTCATACTGTCACTGCTGTCTTA
TGCCATCTGGTCTGTGGAAATTCTCTGGATAGGTGAAGGATAG

Upstream 100 bases:

>100_bases
TGGATCTGCATTACGGCGTAAAACTTGAACAGGCACGGCTAAGCAGCAAAGTGGTTGTGGGAGCGGGAATCGTTCTCACC
CTGCTGACCGGCGCTGTAAT

Downstream 100 bases:

>100_bases
CGTGACAGTAGCACGGCGAAAATTCGATGCGGTCATCGTTGGCGCAGGCGGCGGCGGAATGCGCGCAGCGCTGCAATTGT
CGGAAGCGGGCCTCAAGGTG

Product: succinate dehydrogenase, cytochrome b subunit

Products: fumarate; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MVKRPVRAITGAHYGLRDWLAQRVTAAVMAIYILMLAGVLLVSPPQDYASFKTLFDNQWMRVASFLFLLSLFWHAWIGMR
NILMDYVHPAGIRLILEILVILSLLSYAIWSVEILWIGEG

Sequences:

>Translated_120_residues
MVKRPVRAITGAHYGLRDWLAQRVTAAVMAIYILMLAGVLLVSPPQDYASFKTLFDNQWMRVASFLFLLSLFWHAWIGMR
NILMDYVHPAGIRLILEILVILSLLSYAIWSVEILWIGEG
>Mature_120_residues
MVKRPVRAITGAHYGLRDWLAQRVTAAVMAIYILMLAGVLLVSPPQDYASFKTLFDNQWMRVASFLFLLSLFWHAWIGMR
NILMDYVHPAGIRLILEILVILSLLSYAIWSVEILWIGEG

Specific function: Membrane-anchoring subunit of succinate dehydrogenase (SDH) [H]

COG id: COG2142

COG function: function code C; Succinate dehydrogenase, hydrophobic anchor subunit

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014312
- InterPro:   IPR000701 [H]

Pfam domain/function: PF01127 Sdh_cyt [H]

EC number: 1.3.99.1

Molecular weight: Translated: 13749; Mature: 13749

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKRPVRAITGAHYGLRDWLAQRVTAAVMAIYILMLAGVLLVSPPQDYASFKTLFDNQWM
CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
RVASFLFLLSLFWHAWIGMRNILMDYVHPAGIRLILEILVILSLLSYAIWSVEILWIGEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC
>Mature Secondary Structure
MVKRPVRAITGAHYGLRDWLAQRVTAAVMAIYILMLAGVLLVSPPQDYASFKTLFDNQWM
CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
RVASFLFLLSLFWHAWIGMRNILMDYVHPAGIRLILEILVILSLLSYAIWSVEILWIGEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7698664; 12704232 [H]