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The map label for this gene is ygbA [H]

Identifier: 82545195

GI number: 82545195

Start: 2796429

End: 2796782

Strand: Direct

Name: ygbA [H]

Synonym: SBO_2788

Alternate gene names: 82545195

Gene position: 2796429-2796782 (Clockwise)

Preceding gene: 82545192

Following gene: 82545202

Centisome position: 61.87

GC content: 50.85

Gene sequence:

>354_bases
ATGTCCGGCAAGCGTATCTCTCGTGAAAAACTGACGATTAAAAAAATGATCGATCTTTATCAAGCGAAATGCCCGCAGGC
GTCAGCGGAGCCGGAGCATTACGAGGCGTTGTTTGTTTACGCGCAAAAGCGGCTGGATAAATGTGTGTTCGGCGAAGAGA
AACCAGCCTGTAAGCAGTGTCCGGTGCACTGTTACCAGCCTGCAAAGCGTGAAGAGATGAAACAGATTATGCGTTGGGCC
GGGCCGAGAATGCTGTGGCGTCATCCGATCTTAACCGTGCGTCATCTCATCGATGACAAGCGTCCGGTGCCAGAACTGCC
GGAAAAATATCGTCCGAAAAAACCTCGTGAATAG

Upstream 100 bases:

>100_bases
CGCAAAATTGCGTCGGTTGAATAAACCTCCTCCTTCAGAGCCATAGTCCCCTTTCAAATTAAGTTGTAATATAAATACAC
CTTAAGAGTATGGAGGCAGC

Downstream 100 bases:

>100_bases
TATGCCGGACAGGCAGATCTGTCCGGCAATTTGCAGTTAAATCAATGCCGATTTATCAATTCCCAGCCGCTTCATCCGTG
ACAGCAGGGTCGTGCGTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MSGKRISREKLTIKKMIDLYQAKCPQASAEPEHYEALFVYAQKRLDKCVFGEEKPACKQCPVHCYQPAKREEMKQIMRWA
GPRMLWRHPILTVRHLIDDKRPVPELPEKYRPKKPRE

Sequences:

>Translated_117_residues
MSGKRISREKLTIKKMIDLYQAKCPQASAEPEHYEALFVYAQKRLDKCVFGEEKPACKQCPVHCYQPAKREEMKQIMRWA
GPRMLWRHPILTVRHLIDDKRPVPELPEKYRPKKPRE
>Mature_116_residues
SGKRISREKLTIKKMIDLYQAKCPQASAEPEHYEALFVYAQKRLDKCVFGEEKPACKQCPVHCYQPAKREEMKQIMRWAG
PRMLWRHPILTVRHLIDDKRPVPELPEKYRPKKPRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789088, Length=117, Percent_Identity=99.1452991452991, Blast_Score=237, Evalue=2e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020483
- ProDom:   PD075772 [H]

Pfam domain/function: PF11756 YgbA_NO [H]

EC number: NA

Molecular weight: Translated: 13960; Mature: 13828

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGKRISREKLTIKKMIDLYQAKCPQASAEPEHYEALFVYAQKRLDKCVFGEEKPACKQC
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHC
PVHCYQPAKREEMKQIMRWAGPRMLWRHPILTVRHLIDDKRPVPELPEKYRPKKPRE
CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCC
>Mature Secondary Structure 
SGKRISREKLTIKKMIDLYQAKCPQASAEPEHYEALFVYAQKRLDKCVFGEEKPACKQC
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHC
PVHCYQPAKREEMKQIMRWAGPRMLWRHPILTVRHLIDDKRPVPELPEKYRPKKPRE
CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938937; 9278503 [H]