| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
Click here to switch to the map view.
The map label for this gene is cheR [H]
Identifier: 82543636
GI number: 82543636
Start: 1120601
End: 1121365
Strand: Direct
Name: cheR [H]
Synonym: SBO_1116
Alternate gene names: 82543636
Gene position: 1120601-1121365 (Clockwise)
Preceding gene: 82543635
Following gene: 82543637
Centisome position: 24.79
GC content: 54.12
Gene sequence:
>765_bases TTGATCTATCAACGAGCCGGGATCGTCCTGGCCGATCATAAACGCGACATGGTTTACAACCGACTGGTTCGTCGTTTGCG TTCGCTGGGACTGACGGATTTCGGTCATTATCTGAACTTGCTGGAATCTAATCAGCACAGCGGTGAGTGGCAGGCGTTTA TCAATTCGCTGACCACGAATCTGACGGCATTTTTCCGTGAGGCACATCATTTCCCTCTGCTCGCGGATCACGCACGTCGC CGTTCTGGCGAGTATCGCGTATGGAGCGCGGCGGCTTCAACCGGCGAAGAGCCGTACAGCATTGCGATGACGCTGGCTGA CACATTGGGCACCGCGCCCGGACGCTGGAAAGTGTTTGCCAGTGATATCGACACCGAAGTGCTGGAAAAAGCCAGAAGCG GTATTTATCGCCATGAAGAGTTGAAAAACCTGACGCCGCAGCAACTGCAACGGTATTTCATGCGAGGGACGGGACCGCAT GAAGGGCTGGTACGCGTGCGTCAGGAGCTGGCGAACTATGTTGATTTTGCCCCGCTGAATCTACTGGCGAAACAGTACAC CGTGCCGGGGCCGTTTGATGCGATCTTCTGTCGTAACGTCATGATCTACTTCGATCAAAATACCCAGCAGGAGATTTTGC GCCGCTTTGTTCCGCTCCTTAAACCCGACGGATTGCTGTTTGCGGGTCACTCTGAAAACTTTAGCCACCTTGAGCGCCGC TTCACGCTGCGTGGTCAGACGGTGTATGCGCTAAGTAAGGATTAA
Upstream 100 bases:
>100_bases ACTGAACATCCTGTCATGGTCAACAGTGGAAGGATGATGTCGTGCTTATCTTATTAGGTTACCTGGTTGTTCTCGGTACA GTTTTCGGCGGATAAGTCAA
Downstream 100 bases:
>100_bases CGATGAGCAAAATCAGGGTGTTATCTGTCGATGATTCGGCACTGATGCGCCAGATCATGACAGAAATCATCAACAGCCAT AGCGACATGGAAATGGTGGC
Product: chemotaxis methyltransferase CheR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MIYQRAGIVLADHKRDMVYNRLVRRLRSLGLTDFGHYLNLLESNQHSGEWQAFINSLTTNLTAFFREAHHFPLLADHARR RSGEYRVWSAAASTGEEPYSIAMTLADTLGTAPGRWKVFASDIDTEVLEKARSGIYRHEELKNLTPQQLQRYFMRGTGPH EGLVRVRQELANYVDFAPLNLLAKQYTVPGPFDAIFCRNVMIYFDQNTQQEILRRFVPLLKPDGLLFAGHSENFSHLERR FTLRGQTVYALSKD
Sequences:
>Translated_254_residues MIYQRAGIVLADHKRDMVYNRLVRRLRSLGLTDFGHYLNLLESNQHSGEWQAFINSLTTNLTAFFREAHHFPLLADHARR RSGEYRVWSAAASTGEEPYSIAMTLADTLGTAPGRWKVFASDIDTEVLEKARSGIYRHEELKNLTPQQLQRYFMRGTGPH EGLVRVRQELANYVDFAPLNLLAKQYTVPGPFDAIFCRNVMIYFDQNTQQEILRRFVPLLKPDGLLFAGHSENFSHLERR FTLRGQTVYALSKD >Mature_254_residues MIYQRAGIVLADHKRDMVYNRLVRRLRSLGLTDFGHYLNLLESNQHSGEWQAFINSLTTNLTAFFREAHHFPLLADHARR RSGEYRVWSAAASTGEEPYSIAMTLADTLGTAPGRWKVFASDIDTEVLEKARSGIYRHEELKNLTPQQLQRYFMRGTGPH EGLVRVRQELANYVDFAPLNLLAKQYTVPGPFDAIFCRNVMIYFDQNTQQEILRRFVPLLKPDGLLFAGHSENFSHLERR FTLRGQTVYALSKD
Specific function: Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP [H]
COG id: COG1352
COG function: function code NT; Methylase of chemotaxis methyl-accepting proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheR-type methyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788193, Length=254, Percent_Identity=99.2125984251969, Blast_Score=527, Evalue=1e-151,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022642 - InterPro: IPR000780 - InterPro: IPR022641 [H]
Pfam domain/function: PF01739 CheR; PF03705 CheR_N [H]
EC number: =2.1.1.80 [H]
Molecular weight: Translated: 29307; Mature: 29307
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: PS50123 CHER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYQRAGIVLADHKRDMVYNRLVRRLRSLGLTDFGHYLNLLESNQHSGEWQAFINSLTTN CCEECCCEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LTAFFREAHHFPLLADHARRRSGEYRVWSAAASTGEEPYSIAMTLADTLGTAPGRWKVFA HHHHHHHHCCCCHHHHHHHHCCCCEEEEEHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEH SDIDTEVLEKARSGIYRHEELKNLTPQQLQRYFMRGTGPHEGLVRVRQELANYVDFAPLN HHCCHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHH LLAKQYTVPGPFDAIFCRNVMIYFDQNTQQEILRRFVPLLKPDGLLFAGHSENFSHLERR HHHHHCCCCCCHHHHHHCCEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHH FTLRGQTVYALSKD HHCCCCEEEEEECC >Mature Secondary Structure MIYQRAGIVLADHKRDMVYNRLVRRLRSLGLTDFGHYLNLLESNQHSGEWQAFINSLTTN CCEECCCEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LTAFFREAHHFPLLADHARRRSGEYRVWSAAASTGEEPYSIAMTLADTLGTAPGRWKVFA HHHHHHHHCCCCHHHHHHHHCCCCEEEEEHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEH SDIDTEVLEKARSGIYRHEELKNLTPQQLQRYFMRGTGPHEGLVRVRQELANYVDFAPLN HHCCHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHH LLAKQYTVPGPFDAIFCRNVMIYFDQNTQQEILRRFVPLLKPDGLLFAGHSENFSHLERR HHHHHCCCCCCHHHHHHCCEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHH FTLRGQTVYALSKD HHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3510184; 9097040; 9278503 [H]