Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is 82543501

Identifier: 82543501

GI number: 82543501

Start: 988643

End: 989116

Strand: Reverse

Name: 82543501

Synonym: SBO_0957

Alternate gene names: NA

Gene position: 989116-988643 (Counterclockwise)

Preceding gene: 82543502

Following gene: 82543500

Centisome position: 21.88

GC content: 46.2

Gene sequence:

>474_bases
GTGGCGATAGCGTTAAAAAATATTCAGGCCGGAAATGCTAAAAAATTCACGTTATCCAGCGCCAACAACTCCACGAAAAA
TGCAGCGTTTTATTTGTGGGGTAATCCATCCAGGCCTGTTGTTGCAGAGCTTGGTGATGATTCCGGCTGGCATTTCTACA
GCCAGAGAAATACCGATGGTAGTATCACATTCGCTGTAAACGGACAGGTAATTCCGTTAAATTACGGAAACTTCGATGCC
CGCTATAAACATCGAACTGAGGGGGTACAGGATGTGCGGTATGGTTATGAAATGTATTACAACCCTGGCAGCAACACCGT
TTCATGGACGTTTCGCTCACCTTCGGGACACGGGTTGTCAGGGATATCGATATCGGATACCGGCCGTAACTCAGCGGATA
ACGTCAACGGTGTGTATTACCGACCGCTGCAAAAACTGATTAATGGCATCTGGTATAACGTAGCGAGTATTTAA

Upstream 100 bases:

>100_bases
AATTGCTTTCGGGGATAACGATACAGGTATAAAACAAAACGGCGACGGCATTCTGGATGTTTATGCGAATGGACAGCATG
TATTTCGTTTCCAGAATGGT

Downstream 100 bases:

>100_bases
CAATGTTGCATTTAAAAAATATTACGGCAGGTAATCCGAAAACCGCGGAACAATATCAGCTGACAAAACAGTATGATGTC
ACCTGGCTTTTTTCGGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Side Tail Fiber Protein; Bacteriophage Tail Protein; Phage Tail Fiber Protein; Tail Fiber Protein-Like Protein; Phage Tail-Like Protein; Tail Fiber; Tail Protein

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MAIALKNIQAGNAKKFTLSSANNSTKNAAFYLWGNPSRPVVAELGDDSGWHFYSQRNTDGSITFAVNGQVIPLNYGNFDA
RYKHRTEGVQDVRYGYEMYYNPGSNTVSWTFRSPSGHGLSGISISDTGRNSADNVNGVYYRPLQKLINGIWYNVASI

Sequences:

>Translated_157_residues
MAIALKNIQAGNAKKFTLSSANNSTKNAAFYLWGNPSRPVVAELGDDSGWHFYSQRNTDGSITFAVNGQVIPLNYGNFDA
RYKHRTEGVQDVRYGYEMYYNPGSNTVSWTFRSPSGHGLSGISISDTGRNSADNVNGVYYRPLQKLINGIWYNVASI
>Mature_156_residues
AIALKNIQAGNAKKFTLSSANNSTKNAAFYLWGNPSRPVVAELGDDSGWHFYSQRNTDGSITFAVNGQVIPLNYGNFDAR
YKHRTEGVQDVRYGYEMYYNPGSNTVSWTFRSPSGHGLSGISISDTGRNSADNVNGVYYRPLQKLINGIWYNVASI

Specific function: Unknown

COG id: COG5301

COG function: function code R; Phage-related tail fibre protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17372; Mature: 17241

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIALKNIQAGNAKKFTLSSANNSTKNAAFYLWGNPSRPVVAELGDDSGWHFYSQRNTDG
CEEEEECCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCCEEEEEECCCCC
SITFAVNGQVIPLNYGNFDARYKHRTEGVQDVRYGYEMYYNPGSNTVSWTFRSPSGHGLS
EEEEEECCEEEEEECCCCCCCEEECCCCHHHHCCCEEEEECCCCCEEEEEEECCCCCCCC
GISISDTGRNSADNVNGVYYRPLQKLINGIWYNVASI
CEEECCCCCCCCCCCCCEEEHHHHHHHHHHHEEECCC
>Mature Secondary Structure 
AIALKNIQAGNAKKFTLSSANNSTKNAAFYLWGNPSRPVVAELGDDSGWHFYSQRNTDG
EEEEECCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCCEEEEEECCCCC
SITFAVNGQVIPLNYGNFDARYKHRTEGVQDVRYGYEMYYNPGSNTVSWTFRSPSGHGLS
EEEEEECCEEEEEECCCCCCCEEECCCCHHHHCCCEEEEECCCCCEEEEEEECCCCCCCC
GISISDTGRNSADNVNGVYYRPLQKLINGIWYNVASI
CEEECCCCCCCCCCCCCEEEHHHHHHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA