| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is pyrG
Identifier: 78780167
GI number: 78780167
Start: 1674458
End: 1676068
Strand: Direct
Name: pyrG
Synonym: PMT9312_1782
Alternate gene names: 78780167
Gene position: 1674458-1676068 (Clockwise)
Preceding gene: 78780166
Following gene: 78780168
Centisome position: 97.97
GC content: 34.2
Gene sequence:
>1611_bases ATGTCAAAATTTGTTTTTGTCACCGGAGGAGTAGTTTCTAGCATTGGTAAAGGAATTGTAGCTGCAAGCTTAGGGAGATT ATTAAAGTCTAGAGGATATAGTGTTTCAATATTAAAACTAGATCCATACCTAAATGTTGATCCAGGCACAATGAGCCCTT TCCAACATGGAGAAGTATTTGTAACCGAAGATGGGGCTGAAACAGATTTAGATTTAGGTCACTATGAAAGATTTACTGAT ACTGCAATGACTAGGTTAAATAGTGTGACTACGGGATCTATCTATCAAGCAGTTATTAATAAAGAAAGAAGAGGTAGTTA TAACGGTGGAACTGTGCAAGTAATTCCTCACATAACGAGAGAAATAAGAGAAAGAATTCATAGAGTAGCCTCCAACAGCA ATGCGGATATTATTATTACTGAAATTGGTGGAACAGTTGGTGATATTGAATCTTTACCTTTTTTAGAGGCAATAAGAGAA TTTAAAAATGATGTCAATAGGAATGATGTTGCATACATCCACGTAACATTACTTCCTTACATCAAAACCTCTGGCGAAAT AAAAACTAAACCAACACAACATTCAGTGAAAGAATTAAGATCAATTGGAATTCAGCCAGATTTACTTGTATGTCGCAGTG ACAAATCAATCAATGAAGGTCTTAAAAAGAAGCTTAGTGGATTTTGTGGAGTTAATATAAACTCTGTAATTGAAGCATTA GACGCAGATAGTATTTATTCTGTTCCTCTTTCTTTAAAAAAAGAAGGTTTGTGCAAAGAAACTCTGAAGTATCTAGAACT TGAAGATAAAGAATGTGATTTGAAAAATTGGGAAAAACTAGTTCACAATCTAAGAAATCCTGGAACTCCTATAAAAGTTG CTCTAGTAGGTAAATATATTGAACTTGGAGATGCATATTTATCTGTTGTTGAAGCTTTAAGACATGCATGCATTGAACAA AAGGCTTTATTAGATTTACATTGGGTAAGCGCTGAAATGATAGAAAAAGATTCAGCAGAAACTTACTTGAATGAAGTGGA TGCGATTGTCGTACCTGGGGGCTTTGGAAATAGGGGAGTTAATGGCAAAATTTCGGCTATAAAATTCGCAAGAGAGAATA AAATTCCATTTTTAGGCCTGTGCCTTGGTATGCAATGTGCAGTTATAGAATGGGCTAGAAATGTAGCGAATCTTCCAGAT GCATCTAGTTCGGAACTAGACCCAAAAACTCCCAATCCAGTTATACATTTATTACCAGAACAGGAAGATGTAGTTGATTT AGGCGGGACAATGAGACTTGGAGTTTATCCATGTAGATTGACAAATAATACAATTGGGAAAAAATTGTATGATGAAGATG TTATTTATGAGAGACATCGACATAGATACGAATTTAATAATTACTACAAGCAAAGTTTTTTAAATTCTGGATACAAAATT AGTGGTACATCTCCAGATGGCAGACTAGTAGAGTTAATTGAGTTAGACAATCATCCTTATTTTTTGGCATGTCAATATCA TCCTGAGTTTTTATCAAGACCTGGCAAACCTCATCCTTTATTTAAAGGCTTAATAAAATCCTCTCAAGAAAACTTAACTC AATCAAATTAA
Upstream 100 bases:
>100_bases TATTGAAATAACAATTGATGAATAAGAATATATATGGATGTTCTAAAAGTTTTTTGTTTAAATAAAATATAAGGAGGCTG TGCTTAATTAAAAATATTTA
Downstream 100 bases:
>100_bases TATTCCTTATTTGTTTGAATGAAAATGACAAATTTTTTACCCTTAGTCGAACAATTTCATTCATTACAAGGTGAAGGCTA TCATGCTGGGAAAAGTGCTT
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase [H]
Number of amino acids: Translated: 536; Mature: 535
Protein sequence:
>536_residues MSKFVFVTGGVVSSIGKGIVAASLGRLLKSRGYSVSILKLDPYLNVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFTD TAMTRLNSVTTGSIYQAVINKERRGSYNGGTVQVIPHITREIRERIHRVASNSNADIIITEIGGTVGDIESLPFLEAIRE FKNDVNRNDVAYIHVTLLPYIKTSGEIKTKPTQHSVKELRSIGIQPDLLVCRSDKSINEGLKKKLSGFCGVNINSVIEAL DADSIYSVPLSLKKEGLCKETLKYLELEDKECDLKNWEKLVHNLRNPGTPIKVALVGKYIELGDAYLSVVEALRHACIEQ KALLDLHWVSAEMIEKDSAETYLNEVDAIVVPGGFGNRGVNGKISAIKFARENKIPFLGLCLGMQCAVIEWARNVANLPD ASSSELDPKTPNPVIHLLPEQEDVVDLGGTMRLGVYPCRLTNNTIGKKLYDEDVIYERHRHRYEFNNYYKQSFLNSGYKI SGTSPDGRLVELIELDNHPYFLACQYHPEFLSRPGKPHPLFKGLIKSSQENLTQSN
Sequences:
>Translated_536_residues MSKFVFVTGGVVSSIGKGIVAASLGRLLKSRGYSVSILKLDPYLNVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFTD TAMTRLNSVTTGSIYQAVINKERRGSYNGGTVQVIPHITREIRERIHRVASNSNADIIITEIGGTVGDIESLPFLEAIRE FKNDVNRNDVAYIHVTLLPYIKTSGEIKTKPTQHSVKELRSIGIQPDLLVCRSDKSINEGLKKKLSGFCGVNINSVIEAL DADSIYSVPLSLKKEGLCKETLKYLELEDKECDLKNWEKLVHNLRNPGTPIKVALVGKYIELGDAYLSVVEALRHACIEQ KALLDLHWVSAEMIEKDSAETYLNEVDAIVVPGGFGNRGVNGKISAIKFARENKIPFLGLCLGMQCAVIEWARNVANLPD ASSSELDPKTPNPVIHLLPEQEDVVDLGGTMRLGVYPCRLTNNTIGKKLYDEDVIYERHRHRYEFNNYYKQSFLNSGYKI SGTSPDGRLVELIELDNHPYFLACQYHPEFLSRPGKPHPLFKGLIKSSQENLTQSN >Mature_535_residues SKFVFVTGGVVSSIGKGIVAASLGRLLKSRGYSVSILKLDPYLNVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFTDT AMTRLNSVTTGSIYQAVINKERRGSYNGGTVQVIPHITREIRERIHRVASNSNADIIITEIGGTVGDIESLPFLEAIREF KNDVNRNDVAYIHVTLLPYIKTSGEIKTKPTQHSVKELRSIGIQPDLLVCRSDKSINEGLKKKLSGFCGVNINSVIEALD ADSIYSVPLSLKKEGLCKETLKYLELEDKECDLKNWEKLVHNLRNPGTPIKVALVGKYIELGDAYLSVVEALRHACIEQK ALLDLHWVSAEMIEKDSAETYLNEVDAIVVPGGFGNRGVNGKISAIKFARENKIPFLGLCLGMQCAVIEWARNVANLPDA SSSELDPKTPNPVIHLLPEQEDVVDLGGTMRLGVYPCRLTNNTIGKKLYDEDVIYERHRHRYEFNNYYKQSFLNSGYKIS GTSPDGRLVELIELDNHPYFLACQYHPEFLSRPGKPHPLFKGLIKSSQENLTQSN
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen [H]
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI148491070, Length=553, Percent_Identity=45.5696202531646, Blast_Score=485, Evalue=1e-137, Organism=Homo sapiens, GI28559085, Length=551, Percent_Identity=46.4609800362976, Blast_Score=476, Evalue=1e-134, Organism=Homo sapiens, GI28559083, Length=551, Percent_Identity=46.4609800362976, Blast_Score=476, Evalue=1e-134, Organism=Homo sapiens, GI221316689, Length=551, Percent_Identity=46.4609800362976, Blast_Score=476, Evalue=1e-134, Organism=Escherichia coli, GI1789142, Length=539, Percent_Identity=52.3191094619666, Blast_Score=571, Evalue=1e-164, Organism=Caenorhabditis elegans, GI25148299, Length=605, Percent_Identity=38.6776859504132, Blast_Score=429, Evalue=1e-120, Organism=Saccharomyces cerevisiae, GI6322563, Length=566, Percent_Identity=43.9929328621908, Blast_Score=461, Evalue=1e-130, Organism=Saccharomyces cerevisiae, GI6319432, Length=558, Percent_Identity=42.831541218638, Blast_Score=449, Evalue=1e-127, Organism=Drosophila melanogaster, GI24664469, Length=554, Percent_Identity=46.028880866426, Blast_Score=486, Evalue=1e-137, Organism=Drosophila melanogaster, GI21357815, Length=499, Percent_Identity=44.8897795591182, Blast_Score=413, Evalue=1e-115,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase [H]
EC number: =6.3.4.2 [H]
Molecular weight: Translated: 59666; Mature: 59535
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKFVFVTGGVVSSIGKGIVAASLGRLLKSRGYSVSILKLDPYLNVDPGTMSPFQHGEVF CCCEEEEECHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCEEE VTEDGAETDLDLGHYERFTDTAMTRLNSVTTGSIYQAVINKERRGSYNGGTVQVIPHITR EECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEECHHHHH EIRERIHRVASNSNADIIITEIGGTVGDIESLPFLEAIREFKNDVNRNDVAYIHVTLLPY HHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEE IKTSGEIKTKPTQHSVKELRSIGIQPDLLVCRSDKSINEGLKKKLSGFCGVNINSVIEAL ECCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHH DADSIYSVPLSLKKEGLCKETLKYLELEDKECDLKNWEKLVHNLRNPGTPIKVALVGKYI CCCCEEECCCHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEHHHH ELGDAYLSVVEALRHACIEQKALLDLHWVSAEMIEKDSAETYLNEVDAIVVPGGFGNRGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEECCCCCCCCC NGKISAIKFARENKIPFLGLCLGMQCAVIEWARNVANLPDASSSELDPKTPNPVIHLLPE CCCEEEEEEECCCCCCEEEHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCC QEDVVDLGGTMRLGVYPCRLTNNTIGKKLYDEDVIYERHRHRYEFNNYYKQSFLNSGYKI CCCHHHCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEE SGTSPDGRLVELIELDNHPYFLACQYHPEFLSRPGKPHPLFKGLIKSSQENLTQSN ECCCCCCCEEEEEEECCCCEEEEEEECHHHHCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SKFVFVTGGVVSSIGKGIVAASLGRLLKSRGYSVSILKLDPYLNVDPGTMSPFQHGEVF CCEEEEECHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCEEE VTEDGAETDLDLGHYERFTDTAMTRLNSVTTGSIYQAVINKERRGSYNGGTVQVIPHITR EECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEECHHHHH EIRERIHRVASNSNADIIITEIGGTVGDIESLPFLEAIREFKNDVNRNDVAYIHVTLLPY HHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEE IKTSGEIKTKPTQHSVKELRSIGIQPDLLVCRSDKSINEGLKKKLSGFCGVNINSVIEAL ECCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHH DADSIYSVPLSLKKEGLCKETLKYLELEDKECDLKNWEKLVHNLRNPGTPIKVALVGKYI CCCCEEECCCHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEHHHH ELGDAYLSVVEALRHACIEQKALLDLHWVSAEMIEKDSAETYLNEVDAIVVPGGFGNRGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEECCCCCCCCC NGKISAIKFARENKIPFLGLCLGMQCAVIEWARNVANLPDASSSELDPKTPNPVIHLLPE CCCEEEEEEECCCCCCEEEHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCC QEDVVDLGGTMRLGVYPCRLTNNTIGKKLYDEDVIYERHRHRYEFNNYYKQSFLNSGYKI CCCHHHCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEE SGTSPDGRLVELIELDNHPYFLACQYHPEFLSRPGKPHPLFKGLIKSSQENLTQSN ECCCCCCCEEEEEEECCCCEEEEEEECHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA