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The map label for this gene is atpH [H]

Identifier: 78779929

GI number: 78779929

Start: 1440760

End: 1441302

Strand: Reverse

Name: atpH [H]

Synonym: PMT9312_1545

Alternate gene names: 78779929

Gene position: 1441302-1440760 (Counterclockwise)

Preceding gene: 78779930

Following gene: 78779928

Centisome position: 84.33

GC content: 32.78

Gene sequence:

>543_bases
ATGCCACTTTTAAATTCAGTTACTACACCATATGCAGAAGCATTACTTCAAGTTGTAAATGAAAATTTGCAAACTGAAGA
GATGGTTTCAGAGGTTAAACAACTTCTTGAATTATTAAATGATTCCCCTGAATTGGAAAAGGCACTATCCTCGCCAATTT
TAGAAACTGAAGCTAAGAAGAAAATCATTATTGAAATCTTTTCAAATAAGGTTAATTCTTCATTGCTAAATTTCTTAAAA
TTATTGGCTGATAGGCAAAGAATTGGAATTCTCACATCTATTCTTAATAGATTTTTAGAGATTTACCGAGAAAATAGTAA
TATTGCTTTAGCAACTGTTACTTCTGCAGTCGAGCTTACTGATGAACAGAAAGGTTTAATAACCCAAAAGATCGTCAATA
TCGCTGGAACTCAAAAATTAGAACTTGTAACTAAAATCGACCCATCGCTTATTGGTGGTTTCGTCGCAAGTGTAGGATCT
AAAGTAATTGATGCTTCTCTTGCTTCACAAATTAGAAAACTTGGGTTGTCACTATCCAAGTAA

Upstream 100 bases:

>100_bases
TAGCAATTAAGAAAGCTTTAGACTCTCTCCCAAATCGACTTGATTCAACAACTCAAGAAAATTTGGTAACTCAATCAATT
AATAATATTGAGGTAAACTA

Downstream 100 bases:

>100_bases
CTTTTAAATCAACCTTAAATTCTTAAATCCATGGTATCTATACGCCCTGATGAAATCAGTTCAATCTTAAAACAACAAAT
AACTGATTATGACCAATCTG

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta [H]

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MPLLNSVTTPYAEALLQVVNENLQTEEMVSEVKQLLELLNDSPELEKALSSPILETEAKKKIIIEIFSNKVNSSLLNFLK
LLADRQRIGILTSILNRFLEIYRENSNIALATVTSAVELTDEQKGLITQKIVNIAGTQKLELVTKIDPSLIGGFVASVGS
KVIDASLASQIRKLGLSLSK

Sequences:

>Translated_180_residues
MPLLNSVTTPYAEALLQVVNENLQTEEMVSEVKQLLELLNDSPELEKALSSPILETEAKKKIIIEIFSNKVNSSLLNFLK
LLADRQRIGILTSILNRFLEIYRENSNIALATVTSAVELTDEQKGLITQKIVNIAGTQKLELVTKIDPSLIGGFVASVGS
KVIDASLASQIRKLGLSLSK
>Mature_179_residues
PLLNSVTTPYAEALLQVVNENLQTEEMVSEVKQLLELLNDSPELEKALSSPILETEAKKKIIIEIFSNKVNSSLLNFLKL
LADRQRIGILTSILNRFLEIYRENSNIALATVTSAVELTDEQKGLITQKIVNIAGTQKLELVTKIDPSLIGGFVASVGSK
VIDASLASQIRKLGLSLSK

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction [H]

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family [H]

Homologues:

Organism=Caenorhabditis elegans, GI71984710, Length=173, Percent_Identity=28.3236994219653, Blast_Score=73, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI71984717, Length=173, Percent_Identity=28.3236994219653, Blast_Score=73, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000711 [H]

Pfam domain/function: PF00213 OSCP [H]

EC number: 3.6.3.14

Molecular weight: Translated: 19717; Mature: 19586

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLLNSVTTPYAEALLQVVNENLQTEEMVSEVKQLLELLNDSPELEKALSSPILETEAKK
CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHH
KIIIEIFSNKVNSSLLNFLKLLADRQRIGILTSILNRFLEIYRENSNIALATVTSAVELT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHC
DEQKGLITQKIVNIAGTQKLELVTKIDPSLIGGFVASVGSKVIDASLASQIRKLGLSLSK
CHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PLLNSVTTPYAEALLQVVNENLQTEEMVSEVKQLLELLNDSPELEKALSSPILETEAKK
CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHH
KIIIEIFSNKVNSSLLNFLKLLADRQRIGILTSILNRFLEIYRENSNIALATVTSAVELT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHC
DEQKGLITQKIVNIAGTQKLELVTKIDPSLIGGFVASVGSKVIDASLASQIRKLGLSLSK
CHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA