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The map label for this gene is atpF [H]

Identifier: 78779930

GI number: 78779930

Start: 1441302

End: 1441814

Strand: Reverse

Name: atpF [H]

Synonym: PMT9312_1546

Alternate gene names: 78779930

Gene position: 1441814-1441302 (Counterclockwise)

Preceding gene: 78779931

Following gene: 78779929

Centisome position: 84.36

GC content: 34.5

Gene sequence:

>513_bases
ATGAATTTAACTCTTTTAGCTACAGAAGGTTTTGGATTGAACTTCAATTTATTCGAAACTAATATCCTTAATTGGGCTGT
AGTGGTCTTTGGCCTATATAAATTTTTGCCTAGTTTTCTAGGGAAAATGCTCCAAAAAAGAAGAGAAGGAATTCTTCTTG
AATTAAAAGATGCCGAAGATCGACTAGTTAATGCTACTAAAGCTCTAGATAAGGCAAAAAAAGACTTATCTTCAGCAGAA
GAGAAGGCTAGTCAAATTAAAGCAGATTCCTTCAAAAGATCCGAATCGATCAGAATGGAAAGTGAGAAAAAAGCAATTGA
AGAGATGGCACGAATTAAACAAAGCGCAATCTCTGATGAAAGCTCTGAAGCATCCAGAGCAATTTCTCAACTTCGAAAAG
AGGCTGTTGAACTAGCAATTAAGAAAGCTTTAGACTCTCTCCCAAATCGACTTGATTCAACAACTCAAGAAAATTTGGTA
ACTCAATCAATTAATAATATTGAGGTAAACTAA

Upstream 100 bases:

>100_bases
GACTAGAAATTGAAAGTCAGACGTCTGCTGCTCGTGATCAACTTTCTAAACAGGCTGATGATCTAAGCGAACTTATTGTT
AATAGATTGATTCTAGAAAA

Downstream 100 bases:

>100_bases
TGCCACTTTTAAATTCAGTTACTACACCATATGCAGAAGCATTACTTCAAGTTGTAAATGAAAATTTGCAAACTGAAGAG
ATGGTTTCAGAGGTTAAACA

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b [H]

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MNLTLLATEGFGLNFNLFETNILNWAVVVFGLYKFLPSFLGKMLQKRREGILLELKDAEDRLVNATKALDKAKKDLSSAE
EKASQIKADSFKRSESIRMESEKKAIEEMARIKQSAISDESSEASRAISQLRKEAVELAIKKALDSLPNRLDSTTQENLV
TQSINNIEVN

Sequences:

>Translated_170_residues
MNLTLLATEGFGLNFNLFETNILNWAVVVFGLYKFLPSFLGKMLQKRREGILLELKDAEDRLVNATKALDKAKKDLSSAE
EKASQIKADSFKRSESIRMESEKKAIEEMARIKQSAISDESSEASRAISQLRKEAVELAIKKALDSLPNRLDSTTQENLV
TQSINNIEVN
>Mature_170_residues
MNLTLLATEGFGLNFNLFETNILNWAVVVFGLYKFLPSFLGKMLQKRREGILLELKDAEDRLVNATKALDKAKKDLSSAE
EKASQIKADSFKRSESIRMESEKKAIEEMARIKQSAISDESSEASRAISQLRKEAVELAIKKALDSLPNRLDSTTQENLV
TQSINNIEVN

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) [H]

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002146
- InterPro:   IPR005864 [H]

Pfam domain/function: PF00430 ATP-synt_B [H]

EC number: 3.6.3.14

Molecular weight: Translated: 19080; Mature: 19080

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTLLATEGFGLNFNLFETNILNWAVVVFGLYKFLPSFLGKMLQKRREGILLELKDAED
CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHH
RLVNATKALDKAKKDLSSAEEKASQIKADSFKRSESIRMESEKKAIEEMARIKQSAISDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SSEASRAISQLRKEAVELAIKKALDSLPNRLDSTTQENLVTQSINNIEVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNLTLLATEGFGLNFNLFETNILNWAVVVFGLYKFLPSFLGKMLQKRREGILLELKDAED
CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHH
RLVNATKALDKAKKDLSSAEEKASQIKADSFKRSESIRMESEKKAIEEMARIKQSAISDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SSEASRAISQLRKEAVELAIKKALDSLPNRLDSTTQENLVTQSINNIEVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA