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The map label for this gene is yaeT [H]

Identifier: 78779820

GI number: 78779820

Start: 1347671

End: 1349809

Strand: Reverse

Name: yaeT [H]

Synonym: PMT9312_1436

Alternate gene names: 78779820

Gene position: 1349809-1347671 (Counterclockwise)

Preceding gene: 78779821

Following gene: 78779819

Centisome position: 78.97

GC content: 33.66

Gene sequence:

>2139_bases
ATGCAAAAACATTCTTCAAAATTTAGAAAGGTTTTCACAAATATTGCTTGTTCTCCTCTGATTTTGATATCTAATAATTC
AGAACTGGCGGCAAAGTATTTGCCAAATGAAGTTGAGCAATCAGTAACAAATTTAGAAATAAACAAAATTAAAAATGGTT
TATTTCAAGCAGTTGATATTAAACATGAAAAAAATTTCTTTATTGCAGAGAATAAAGAAAATATCAATCAAGAAAGTGTT
CTTGTCTCAGAAATAATTATTGAAGGGTGGGAAAATCATCCTGGGGGGAGAAAACTTGAATTGGCGGCATATGATTCTAT
GAGTATAAAGCCAGGAAGTATTGTTGATAATCGAATTTTAAATCAAGACCTAAATTCAATATATGCTACTGGTTGGTTTT
CAGGAGTTAAAATAAAGTCTCAAGATGGGCCATTGGGAGTACGACTAATTGTAAATGTAGTGCCTAATCCAATTTTGAAG
AAAGTAGAACTTAAACCAGAAAATTCAGTAATCTCTAATGCATACGTAGATAGTATTTTTAATAATTTTTACGGAACAAC
ACTTAATCTAAATGAATTTCAAAATAAGATAGAAATAATAAAAAAACGTTATGAAGATGAGGGTTATTCTTTAGTTAGAA
TTAATAGTCCAGATAGAATTTCTGATGACGGGGTAATAATACTAAATGTTTCTGAAGGGATAATATCTGATGTTAAGTTT
AGATTCCCAGGATCTGACGGTGAATCTATTATCGATGGAAAACCTAGAAAAGGGAAAACAAAAGACTGGGTCATAAAAAG
AGAGCTAAAAACGCAACCTGGAACCGTATTTAATAGAAAAATTTTAGAAGCAGATATTAAAAGACTTTATGCTACATCAC
TTTTCAATGATGTAAAGGTTTCTCTTGGTCCTGATAATTTAAATCCTGGTAAAGTCATAATCTTTCTAGATTTAAGTGAA
CAAAGAACAGGATCATTAACTGGTGGCCTTGGTTATGCTACTCGTTCAGGCATTTTTGCCACAATTGGTTTGCAGGAAAC
AAATGCATTAGGTAGAGCATGGTCTACTAGCATCAACCTAAATTTTGGAGAATATTCAACAACCTATAATTTTTCTCTAA
CTGATCCATGGATTAAGGGAGATAAACATAAAACTGCTTTTAGAACAAATGTTTTTCTGAGTAGAGATTATCCACAAGAA
TTTAGGAGTGAAAATAATGGAAAGTTATACGCTGTAGATGATAAAACACCATCAAATGCTGATACTTTTTCATCAATAGT
TTTAGAAAAAACGGGAGGAGGATTTTCTTTCTCAAGGCCACTTAATGGTGGAGATCCATTTAAGCCTTCTAAATGGAGAG
TTCTTGGAGGAATGAATTTTAAGGAAGTAAAGATGATTGATGGTAGTGGTGAAAAAAGAACTTATGCTGATAGGACGCCA
AGAACAACAAGAGAAAACATAACAGATATTATCTGTATTGGATACTCTCCAAATGATGGGTCATGCCCTGGAGAAAATAC
ATTGGTCAGTTTTATTGCAAGTACAACTAGAAATAATTTGAATAATTCTGTAAATCCAACTTCAGGAAATAAATTAAGCT
TTGGTACTGAACAGTTTGTTCCAATCGGGGAAAACTCTCCAACTTTCAATAGAATGAGAGCATCGTATTCATACTTTATA
CCAACAAAGTTGATAAATTTTACGAAAGAATGTAGGTCTAGTAATGCTAATAGTGAAGATTGCCCACAAACTATTGGTTT
TCAATTGAAGGCAGGAACCATTGTTGGTGAATTGCCTCCTTATGAAGCATTTTGTATGGGAGGAACATCATCTGTCAGAG
GTTGGGCATCTTGTGATTTGGCTGTCAGTAAAAGTTTTCTTGAAGGCACAATAGAGCATAGGTTTCCTATATGGAGAATG
ATATCAGGAGCTTTATTTGTTGATGCAGGAAGTGATTTAGGTTCTCAAAAGGATGTTCCAGGTAAACCTGGTAAATTATT
GCAGAAATCAGGTGCTGGTTATTCGCTTGGTGGGGGAGTTGGAGTGAAAACGCCTATTGGTCCATTAAGACTAGATATTG
CTAGTAAGGACCTAAGTGGAGATTGGAGATATACACTTGGAGTTGGATGGAAGTTTTAA

Upstream 100 bases:

>100_bases
GGTCTAATTGAAGCTTATAGTGAAATAAACCGAAGAATAAACGATTTCATTTAACTCAATTCAAAAATTAATGCTTCAGA
TTCCATAATCAAAAAATACT

Downstream 100 bases:

>100_bases
GTGTTTTCTTGGCCTACTAATTATGATTCTTGCTTCACCTTGGCTGGTGTTATCTCCAGAGAAGGAATAGGCCTTCATAG
TGGAGAAAAAACAAGACTTA

Product: outer envelope membrane protein-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 712; Mature: 712

Protein sequence:

>712_residues
MQKHSSKFRKVFTNIACSPLILISNNSELAAKYLPNEVEQSVTNLEINKIKNGLFQAVDIKHEKNFFIAENKENINQESV
LVSEIIIEGWENHPGGRKLELAAYDSMSIKPGSIVDNRILNQDLNSIYATGWFSGVKIKSQDGPLGVRLIVNVVPNPILK
KVELKPENSVISNAYVDSIFNNFYGTTLNLNEFQNKIEIIKKRYEDEGYSLVRINSPDRISDDGVIILNVSEGIISDVKF
RFPGSDGESIIDGKPRKGKTKDWVIKRELKTQPGTVFNRKILEADIKRLYATSLFNDVKVSLGPDNLNPGKVIIFLDLSE
QRTGSLTGGLGYATRSGIFATIGLQETNALGRAWSTSINLNFGEYSTTYNFSLTDPWIKGDKHKTAFRTNVFLSRDYPQE
FRSENNGKLYAVDDKTPSNADTFSSIVLEKTGGGFSFSRPLNGGDPFKPSKWRVLGGMNFKEVKMIDGSGEKRTYADRTP
RTTRENITDIICIGYSPNDGSCPGENTLVSFIASTTRNNLNNSVNPTSGNKLSFGTEQFVPIGENSPTFNRMRASYSYFI
PTKLINFTKECRSSNANSEDCPQTIGFQLKAGTIVGELPPYEAFCMGGTSSVRGWASCDLAVSKSFLEGTIEHRFPIWRM
ISGALFVDAGSDLGSQKDVPGKPGKLLQKSGAGYSLGGGVGVKTPIGPLRLDIASKDLSGDWRYTLGVGWKF

Sequences:

>Translated_712_residues
MQKHSSKFRKVFTNIACSPLILISNNSELAAKYLPNEVEQSVTNLEINKIKNGLFQAVDIKHEKNFFIAENKENINQESV
LVSEIIIEGWENHPGGRKLELAAYDSMSIKPGSIVDNRILNQDLNSIYATGWFSGVKIKSQDGPLGVRLIVNVVPNPILK
KVELKPENSVISNAYVDSIFNNFYGTTLNLNEFQNKIEIIKKRYEDEGYSLVRINSPDRISDDGVIILNVSEGIISDVKF
RFPGSDGESIIDGKPRKGKTKDWVIKRELKTQPGTVFNRKILEADIKRLYATSLFNDVKVSLGPDNLNPGKVIIFLDLSE
QRTGSLTGGLGYATRSGIFATIGLQETNALGRAWSTSINLNFGEYSTTYNFSLTDPWIKGDKHKTAFRTNVFLSRDYPQE
FRSENNGKLYAVDDKTPSNADTFSSIVLEKTGGGFSFSRPLNGGDPFKPSKWRVLGGMNFKEVKMIDGSGEKRTYADRTP
RTTRENITDIICIGYSPNDGSCPGENTLVSFIASTTRNNLNNSVNPTSGNKLSFGTEQFVPIGENSPTFNRMRASYSYFI
PTKLINFTKECRSSNANSEDCPQTIGFQLKAGTIVGELPPYEAFCMGGTSSVRGWASCDLAVSKSFLEGTIEHRFPIWRM
ISGALFVDAGSDLGSQKDVPGKPGKLLQKSGAGYSLGGGVGVKTPIGPLRLDIASKDLSGDWRYTLGVGWKF
>Mature_712_residues
MQKHSSKFRKVFTNIACSPLILISNNSELAAKYLPNEVEQSVTNLEINKIKNGLFQAVDIKHEKNFFIAENKENINQESV
LVSEIIIEGWENHPGGRKLELAAYDSMSIKPGSIVDNRILNQDLNSIYATGWFSGVKIKSQDGPLGVRLIVNVVPNPILK
KVELKPENSVISNAYVDSIFNNFYGTTLNLNEFQNKIEIIKKRYEDEGYSLVRINSPDRISDDGVIILNVSEGIISDVKF
RFPGSDGESIIDGKPRKGKTKDWVIKRELKTQPGTVFNRKILEADIKRLYATSLFNDVKVSLGPDNLNPGKVIIFLDLSE
QRTGSLTGGLGYATRSGIFATIGLQETNALGRAWSTSINLNFGEYSTTYNFSLTDPWIKGDKHKTAFRTNVFLSRDYPQE
FRSENNGKLYAVDDKTPSNADTFSSIVLEKTGGGFSFSRPLNGGDPFKPSKWRVLGGMNFKEVKMIDGSGEKRTYADRTP
RTTRENITDIICIGYSPNDGSCPGENTLVSFIASTTRNNLNNSVNPTSGNKLSFGTEQFVPIGENSPTFNRMRASYSYFI
PTKLINFTKECRSSNANSEDCPQTIGFQLKAGTIVGELPPYEAFCMGGTSSVRGWASCDLAVSKSFLEGTIEHRFPIWRM
ISGALFVDAGSDLGSQKDVPGKPGKLLQKSGAGYSLGGGVGVKTPIGPLRLDIASKDLSGDWRYTLGVGWKF

Specific function: Involved in the assembly of outer membrane proteins. Does not play a direct role in the export of outer membrane lipids [H]

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Escherichia coli, GI1786374, Length=447, Percent_Identity=24.1610738255034, Blast_Score=71, Evalue=3e-13,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 78572; Mature: 78572

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKHSSKFRKVFTNIACSPLILISNNSELAAKYLPNEVEQSVTNLEINKIKNGLFQAVDI
CCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCHHHHHHHHCEEHHHHHHHHEEEEEE
KHEKNFFIAENKENINQESVLVSEIIIEGWENHPGGRKLELAAYDSMSIKPGSIVDNRIL
EECCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHH
NQDLNSIYATGWFSGVKIKSQDGPLGVRLIVNVVPNPILKKVELKPENSVISNAYVDSIF
HHHHHHHEEECEECCEEEECCCCCEEEEEEEECCCCCHHHEEEECCCCCHHHHHHHHHHH
NNFYGTTLNLNEFQNKIEIIKKRYEDEGYSLVRINSPDRISDDGVIILNVSEGIISDVKF
HHHCCCEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCEEE
RFPGSDGESIIDGKPRKGKTKDWVIKRELKTQPGTVFNRKILEADIKRLYATSLFNDVKV
ECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEE
SLGPDNLNPGKVIIFLDLSEQRTGSLTGGLGYATRSGIFATIGLQETNALGRAWSTSINL
EECCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHCCCEEEEEECCCCCCCCCEEEEEEEE
NFGEYSTTYNFSLTDPWIKGDKHKTAFRTNVFLSRDYPQEFRSENNGKLYAVDDKTPSNA
EECCCEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCHHHCCCCCCEEEEECCCCCCCC
DTFSSIVLEKTGGGFSFSRPLNGGDPFKPSKWRVLGGMNFKEVKMIDGSGEKRTYADRTP
HHHHEEEEEECCCCEEECCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCC
RTTRENITDIICIGYSPNDGSCPGENTLVSFIASTTRNNLNNSVNPTSGNKLSFGTEQFV
CCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEE
PIGENSPTFNRMRASYSYFIPTKLINFTKECRSSNANSEDCPQTIGFQLKAGTIVGELPP
ECCCCCCCHHHHHCCEEEECHHHHHHHHHHHHCCCCCCCCCHHHHCEEEECCEEEECCCC
YEAFCMGGTSSVRGWASCDLAVSKSFLEGTIEHRFPIWRMISGALFVDAGSDLGSQKDVP
CCEEEECCCCCCCCCEEECHHHHHHHHHHHHHHCCHHHHHHCCEEEEECCCCCCCCCCCC
GKPGKLLQKSGAGYSLGGGVGVKTPIGPLRLDIASKDLSGDWRYTLGVGWKF
CCCHHHHHHCCCCEECCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MQKHSSKFRKVFTNIACSPLILISNNSELAAKYLPNEVEQSVTNLEINKIKNGLFQAVDI
CCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCHHHHHHHHCEEHHHHHHHHEEEEEE
KHEKNFFIAENKENINQESVLVSEIIIEGWENHPGGRKLELAAYDSMSIKPGSIVDNRIL
EECCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHH
NQDLNSIYATGWFSGVKIKSQDGPLGVRLIVNVVPNPILKKVELKPENSVISNAYVDSIF
HHHHHHHEEECEECCEEEECCCCCEEEEEEEECCCCCHHHEEEECCCCCHHHHHHHHHHH
NNFYGTTLNLNEFQNKIEIIKKRYEDEGYSLVRINSPDRISDDGVIILNVSEGIISDVKF
HHHCCCEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCEEE
RFPGSDGESIIDGKPRKGKTKDWVIKRELKTQPGTVFNRKILEADIKRLYATSLFNDVKV
ECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEE
SLGPDNLNPGKVIIFLDLSEQRTGSLTGGLGYATRSGIFATIGLQETNALGRAWSTSINL
EECCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHCCCEEEEEECCCCCCCCCEEEEEEEE
NFGEYSTTYNFSLTDPWIKGDKHKTAFRTNVFLSRDYPQEFRSENNGKLYAVDDKTPSNA
EECCCEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCHHHCCCCCCEEEEECCCCCCCC
DTFSSIVLEKTGGGFSFSRPLNGGDPFKPSKWRVLGGMNFKEVKMIDGSGEKRTYADRTP
HHHHEEEEEECCCCEEECCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCC
RTTRENITDIICIGYSPNDGSCPGENTLVSFIASTTRNNLNNSVNPTSGNKLSFGTEQFV
CCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEE
PIGENSPTFNRMRASYSYFIPTKLINFTKECRSSNANSEDCPQTIGFQLKAGTIVGELPP
ECCCCCCCHHHHHCCEEEECHHHHHHHHHHHHCCCCCCCCCHHHHCEEEECCEEEECCCC
YEAFCMGGTSSVRGWASCDLAVSKSFLEGTIEHRFPIWRMISGALFVDAGSDLGSQKDVP
CCEEEECCCCCCCCCEEECHHHHHHHHHHHHHHCCHHHHHHCCEEEEECCCCCCCCCCCC
GKPGKLLQKSGAGYSLGGGVGVKTPIGPLRLDIASKDLSGDWRYTLGVGWKF
CCCHHHHHHCCCCEECCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA