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The map label for this gene is 78778743

Identifier: 78778743

GI number: 78778743

Start: 338464

End: 338712

Strand: Direct

Name: 78778743

Synonym: PMT9312_0358

Alternate gene names: NA

Gene position: 338464-338712 (Clockwise)

Preceding gene: 78778742

Following gene: 78778745

Centisome position: 19.8

GC content: 28.51

Gene sequence:

>249_bases
TTGAATTCAAATAATGATTTCTGGTTAATTGACTCCAATTTTGTAGGGGTGATGCGTTTCTACAAAGATAATGAGTATTC
TGATAAATCTATTGCTTATATGTTTGTTGAAGAAGGAATCATTATGGGAATTCATGGAGAAAATCCTCCATTAATGAAAA
CTAGAAAAAAAATTGTTATTGAAGAAGCAAGATTGTTATGGCAAAAATTGTTAAATGAAGGTTGGCAAAAAACTAATAAA
AAATGGTGA

Upstream 100 bases:

>100_bases
ACAAAAAGAAAAACTATATCAAATATGAGAAAACTTAAGAAATATTTCCCTCGCAAATGGCAATGAAAGCATATGATTGA
TTTAATTTCACTTTGGGTTA

Downstream 100 bases:

>100_bases
GAAAAAAACTCTACAAAAAAAATTTTTTAATTTTTGAAAATAAATGAACCTTTAGGATATAACTTGGAAATTCTTTTATA
TTGTAAAACTTTCCTTTTTT

Product: TIR domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MNSNNDFWLIDSNFVGVMRFYKDNEYSDKSIAYMFVEEGIIMGIHGENPPLMKTRKKIVIEEARLLWQKLLNEGWQKTNK
KW

Sequences:

>Translated_82_residues
MNSNNDFWLIDSNFVGVMRFYKDNEYSDKSIAYMFVEEGIIMGIHGENPPLMKTRKKIVIEEARLLWQKLLNEGWQKTNK
KW
>Mature_82_residues
MNSNNDFWLIDSNFVGVMRFYKDNEYSDKSIAYMFVEEGIIMGIHGENPPLMKTRKKIVIEEARLLWQKLLNEGWQKTNK
KW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9829; Mature: 9829

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSNNDFWLIDSNFVGVMRFYKDNEYSDKSIAYMFVEEGIIMGIHGENPPLMKTRKKIVI
CCCCCCEEEECCCCEEEHEEECCCCCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHH
EEARLLWQKLLNEGWQKTNKKW
HHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNSNNDFWLIDSNFVGVMRFYKDNEYSDKSIAYMFVEEGIIMGIHGENPPLMKTRKKIVI
CCCCCCEEEECCCCEEEHEEECCCCCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHH
EEARLLWQKLLNEGWQKTNKKW
HHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA