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The map label for this gene is yaeJ [H]

Identifier: 78778742

GI number: 78778742

Start: 337963

End: 338391

Strand: Direct

Name: yaeJ [H]

Synonym: PMT9312_0357

Alternate gene names: 78778742

Gene position: 337963-338391 (Clockwise)

Preceding gene: 78778739

Following gene: 78778743

Centisome position: 19.77

GC content: 27.04

Gene sequence:

>429_bases
ATGGATTTAAAAATTACTAAAACATTAGTAATCCCATCCAAAGAAATTAAGTGGCGATTTTCTAGATCCTCTGGTCCTGG
AGGGCAAAATGTAAATAAAATTGAAAGTAGAGTAGAGATTATTTTTAATTTAGAAGATTCAAAAGTCTTGAATGATTATC
AGAAAGCAATTCTTAAGATTAATTTGAAAACTAAATTATTTAATAATTGTCTATGTTTAGCGGTTCAAGAACACAGAAAC
CAATTATTAAATAGAGAGCTAGCCTTGATGAAATTTAGTTCAATCATAAAAGATGCCTTGAATAAACCATTTAAATTAAG
AAAATCTACAAAACCTACTAAAGCATCACAAAAGAAAAGAGTTGCTTTTAAGAAAAAACGTGGCGAATTGAAAAAAAGTA
GACAAAAAGAAAAACTATATCAAATATGA

Upstream 100 bases:

>100_bases
TACCTAACATAACCGCCCAGTATTTACCGATCAAATTTTAAGGTATGTTTTAAAGTAATAAACAGATAATTCTAAAAATC
TAAATTAAGAAGAACTAAAA

Downstream 100 bases:

>100_bases
GAAAACTTAAGAAATATTTCCCTCGCAAATGGCAATGAAAGCATATGATTGATTTAATTTCACTTTGGGTTATTGAATTC
AAATAATGATTTCTGGTTAA

Product: peptidyl-tRNA hydrolase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MDLKITKTLVIPSKEIKWRFSRSSGPGGQNVNKIESRVEIIFNLEDSKVLNDYQKAILKINLKTKLFNNCLCLAVQEHRN
QLLNRELALMKFSSIIKDALNKPFKLRKSTKPTKASQKKRVAFKKKRGELKKSRQKEKLYQI

Sequences:

>Translated_142_residues
MDLKITKTLVIPSKEIKWRFSRSSGPGGQNVNKIESRVEIIFNLEDSKVLNDYQKAILKINLKTKLFNNCLCLAVQEHRN
QLLNRELALMKFSSIIKDALNKPFKLRKSTKPTKASQKKRVAFKKKRGELKKSRQKEKLYQI
>Mature_142_residues
MDLKITKTLVIPSKEIKWRFSRSSGPGGQNVNKIESRVEIIFNLEDSKVLNDYQKAILKINLKTKLFNNCLCLAVQEHRN
QLLNRELALMKFSSIIKDALNKPFKLRKSTKPTKASQKKRVAFKKKRGELKKSRQKEKLYQI

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=132, Percent_Identity=31.8181818181818, Blast_Score=78, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 16559; Mature: 16559

Theoretical pI: Translated: 11.14; Mature: 11.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLKITKTLVIPSKEIKWRFSRSSGPGGQNVNKIESRVEIIFNLEDSKVLNDYQKAILKI
CCCEEEEEEEECCHHHEEEECCCCCCCCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHH
NLKTKLFNNCLCLAVQEHRNQLLNRELALMKFSSIIKDALNKPFKLRKSTKPTKASQKKR
CHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHH
VAFKKKRGELKKSRQKEKLYQI
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDLKITKTLVIPSKEIKWRFSRSSGPGGQNVNKIESRVEIIFNLEDSKVLNDYQKAILKI
CCCEEEEEEEECCHHHEEEECCCCCCCCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHH
NLKTKLFNNCLCLAVQEHRNQLLNRELALMKFSSIIKDALNKPFKLRKSTKPTKASQKKR
CHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHH
VAFKKKRGELKKSRQKEKLYQI
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7635807; 9278503; 7635808 [H]