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The map label for this gene is 78484823

Identifier: 78484823

GI number: 78484823

Start: 535278

End: 535706

Strand: Reverse

Name: 78484823

Synonym: Tcr_0478

Alternate gene names: NA

Gene position: 535706-535278 (Counterclockwise)

Preceding gene: 78484828

Following gene: 78484808

Centisome position: 22.07

GC content: 39.86

Gene sequence:

>429_bases
ATGATTAAAGATAAATTAAATGAAAAAGATTATAACAAATTAGAGGATGTAAAAATGAGTGAAAATAAAATGTTGGCTGC
CTACCGTCACATACTGGAAAAAGCAAAAGAGTCGCTCATTCAAGCAGACATGAAAAGCTGGGACTTACTTGGCAAGGCGG
TACATAAGGTCGAAGAGAAAGAGTCGGTTCTGGAAGAACTGAGTCGAGAGCAACTGGAGCAGGTTCAAGAAGACGTCAAA
GCGGATATTTTCCAACTGGCGGAATACATGGAAGAGTTCAACGAAGGGGTAGAGTCTTTTATTGAAATGGATTTGCCTGT
CATTGAAAAATATTTGGAAGAAAAAGCTCTCAGCTTGTCAGACCCAACTGAATTAATGATACTGAAGCTTCGCATCACGG
CCGCAATGAATTCCGAGAAGTCGGTTTAA

Upstream 100 bases:

>100_bases
ATCCCAAACGTGTTGGATAGCCGCTTCAATGGATTGTGGTTGATAGTCATTTGTCGATTCAGGCATGGATTCTGTTGTCA
TGTATCGCTTTCTTTTTGGT

Downstream 100 bases:

>100_bases
TATTAAATGAAAAAACGGCCAGGCCTGGCCGTTTTCTATAACGTTTACACACTAAACACGCGCTTCTAGCGGTCCGTTTT
TTTTGCCTGAACAAGCGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MIKDKLNEKDYNKLEDVKMSENKMLAAYRHILEKAKESLIQADMKSWDLLGKAVHKVEEKESVLEELSREQLEQVQEDVK
ADIFQLAEYMEEFNEGVESFIEMDLPVIEKYLEEKALSLSDPTELMILKLRITAAMNSEKSV

Sequences:

>Translated_142_residues
MIKDKLNEKDYNKLEDVKMSENKMLAAYRHILEKAKESLIQADMKSWDLLGKAVHKVEEKESVLEELSREQLEQVQEDVK
ADIFQLAEYMEEFNEGVESFIEMDLPVIEKYLEEKALSLSDPTELMILKLRITAAMNSEKSV
>Mature_142_residues
MIKDKLNEKDYNKLEDVKMSENKMLAAYRHILEKAKESLIQADMKSWDLLGKAVHKVEEKESVLEELSREQLEQVQEDVK
ADIFQLAEYMEEFNEGVESFIEMDLPVIEKYLEEKALSLSDPTELMILKLRITAAMNSEKSV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16542; Mature: 16542

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKDKLNEKDYNKLEDVKMSENKMLAAYRHILEKAKESLIQADMKSWDLLGKAVHKVEEK
CCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESVLEELSREQLEQVQEDVKADIFQLAEYMEEFNEGVESFIEMDLPVIEKYLEEKALSLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
DPTELMILKLRITAAMNSEKSV
CCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIKDKLNEKDYNKLEDVKMSENKMLAAYRHILEKAKESLIQADMKSWDLLGKAVHKVEEK
CCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESVLEELSREQLEQVQEDVKADIFQLAEYMEEFNEGVESFIEMDLPVIEKYLEEKALSLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
DPTELMILKLRITAAMNSEKSV
CCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA