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The map label for this gene is 78484828

Identifier: 78484828

GI number: 78484828

Start: 541303

End: 541923

Strand: Reverse

Name: 78484828

Synonym: Tcr_0483

Alternate gene names: NA

Gene position: 541923-541303 (Counterclockwise)

Preceding gene: 78484843

Following gene: 78484823

Centisome position: 22.32

GC content: 41.38

Gene sequence:

>621_bases
ATGTCAAATATTCATATGACAATTCCTGAAATCCCTTCGTTATTTGAAGAAGCGGTTTACCAACTGCTTTCAAATGGCGA
GCCGATTAAAGAATACGACCTGATGAAGCGATTGGTCGCTTTAGGGTTTGACCAGTTCACCCCTTCTCTAGAACCTTTAG
AACTTTTCAGAGCACATTTTTTATTGTTTCATTTATTGTATCGACTTCAAGATAAGTGGCACACCGAAAAGAAAGGCACG
CTCAACATTCACACTTTGGATATTTATTTAGACCTAGCACCTAAAGAAGATACAACGCAAAAGCTATCGGAAATTGATGG
GGTCAAAACGTACTATCTGGACTATGAAACCTTTATTCACACCCAAGAACAAGACGTCATTGATTTAATTGACGGGTTTT
GGAAAAGTTTTGGAGAATCCGGGGCCCTCTCTTACAGTCAAAAAGAGATTCAAGCCGCCAAACAGACACTGGAAATTGAA
ACCGACATCACACCCAAAAAAGTGCATCTGCAATATCGCAAACTGTCTCAAATCCACCATCCTGACAAAGGTGGCAAAGC
CGAAGCATTCCATGCTATCTGCCATGCCAAGGAAGTGTTACTGACGGCGGCCGAAACTTAA

Upstream 100 bases:

>100_bases
GCCCAAAATGGATCGGGTCGAAAGTGCCGCCGTTGATGCCGATTAAACGATTGGTTTGCAAAAATAATTCTCTTTAGGTT
TTTTTGGTATTATAGCAACT

Downstream 100 bases:

>100_bases
CGCTGCGACCGCCTGCACCTCAAGTTTATTCTCTAATCGTGCCATCTCCCAACACAATATATTTTTGAGACGTCAAACCT
TCCAGCCCGACAGGTCCGCG

Product: heat shock protein DnaJ-like

Products: NA

Alternate protein names: Heat Shock Protein DNAJ-Like; DNAJ-Related Protein

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MSNIHMTIPEIPSLFEEAVYQLLSNGEPIKEYDLMKRLVALGFDQFTPSLEPLELFRAHFLLFHLLYRLQDKWHTEKKGT
LNIHTLDIYLDLAPKEDTTQKLSEIDGVKTYYLDYETFIHTQEQDVIDLIDGFWKSFGESGALSYSQKEIQAAKQTLEIE
TDITPKKVHLQYRKLSQIHHPDKGGKAEAFHAICHAKEVLLTAAET

Sequences:

>Translated_206_residues
MSNIHMTIPEIPSLFEEAVYQLLSNGEPIKEYDLMKRLVALGFDQFTPSLEPLELFRAHFLLFHLLYRLQDKWHTEKKGT
LNIHTLDIYLDLAPKEDTTQKLSEIDGVKTYYLDYETFIHTQEQDVIDLIDGFWKSFGESGALSYSQKEIQAAKQTLEIE
TDITPKKVHLQYRKLSQIHHPDKGGKAEAFHAICHAKEVLLTAAET
>Mature_205_residues
SNIHMTIPEIPSLFEEAVYQLLSNGEPIKEYDLMKRLVALGFDQFTPSLEPLELFRAHFLLFHLLYRLQDKWHTEKKGTL
NIHTLDIYLDLAPKEDTTQKLSEIDGVKTYYLDYETFIHTQEQDVIDLIDGFWKSFGESGALSYSQKEIQAAKQTLEIET
DITPKKVHLQYRKLSQIHHPDKGGKAEAFHAICHAKEVLLTAAET

Specific function: Unknown

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23790; Mature: 23659

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNIHMTIPEIPSLFEEAVYQLLSNGEPIKEYDLMKRLVALGFDQFTPSLEPLELFRAHF
CCCCEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHH
LLFHLLYRLQDKWHTEKKGTLNIHTLDIYLDLAPKEDTTQKLSEIDGVKTYYLDYETFIH
HHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHCCCEEEEEEHHHHHC
TQEQDVIDLIDGFWKSFGESGALSYSQKEIQAAKQTLEIETDITPKKVHLQYRKLSQIHH
CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
PDKGGKAEAFHAICHAKEVLLTAAET
CCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNIHMTIPEIPSLFEEAVYQLLSNGEPIKEYDLMKRLVALGFDQFTPSLEPLELFRAHF
CCCEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHH
LLFHLLYRLQDKWHTEKKGTLNIHTLDIYLDLAPKEDTTQKLSEIDGVKTYYLDYETFIH
HHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHCCCEEEEEEHHHHHC
TQEQDVIDLIDGFWKSFGESGALSYSQKEIQAAKQTLEIETDITPKKVHLQYRKLSQIHH
CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
PDKGGKAEAFHAICHAKEVLLTAAET
CCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA