Click here to switch to the map view.

The map label for this gene is 78484782

Identifier: 78484782

GI number: 78484782

Start: 490289

End: 490564

Strand: Reverse

Name: 78484782

Synonym: Tcr_0437

Alternate gene names: NA

Gene position: 490564-490289 (Counterclockwise)

Preceding gene: 78484783

Following gene: 78484781

Centisome position: 20.21

GC content: 41.67

Gene sequence:

>276_bases
ATGTCTGAGCTACAATCCGTTCACAATTACTACGAAAGACCGGTCTTTAACCATATCCAGGAAAACTATCTCAACGTCGG
GTTGACCGAAAATCAACTGGCCGATATGGCTTGCATTGCACTCAACCGTATCGCGCCGCGTTATATTCGCCATGATATCG
ACATGTCGTTTTACATGTCTTCCGAGGAATACCAAGAGATACAAACACGCGTTGAAAAGGCCGTTAAAAAAGCCTTTAAA
AAAGTCAAAAAATTAGATGGATTGGAAAGAACTTAG

Upstream 100 bases:

>100_bases
AGCGATTGTTTCTTTCCTAAAAAGCACTCATCGAGTGCTTTTTTTATGCCTGCATTTTCGGTATAGTTAAATAATGGTTA
TTCATTAAGGAATTTTACTC

Downstream 100 bases:

>100_bases
TTTAGAACTTCATATTTAAAAGCGCCCTCTTTCGTTGACCAAACCGACTCCATTGCTTCATGCCACATTTTGCTTTAAGG
AGCAGAGATGCATTCTGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Orphan Protein

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MSELQSVHNYYERPVFNHIQENYLNVGLTENQLADMACIALNRIAPRYIRHDIDMSFYMSSEEYQEIQTRVEKAVKKAFK
KVKKLDGLERT

Sequences:

>Translated_91_residues
MSELQSVHNYYERPVFNHIQENYLNVGLTENQLADMACIALNRIAPRYIRHDIDMSFYMSSEEYQEIQTRVEKAVKKAFK
KVKKLDGLERT
>Mature_90_residues
SELQSVHNYYERPVFNHIQENYLNVGLTENQLADMACIALNRIAPRYIRHDIDMSFYMSSEEYQEIQTRVEKAVKKAFKK
VKKLDGLERT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10799; Mature: 10668

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELQSVHNYYERPVFNHIQENYLNVGLTENQLADMACIALNRIAPRYIRHDIDMSFYMS
CHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC
SEEYQEIQTRVEKAVKKAFKKVKKLDGLERT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SELQSVHNYYERPVFNHIQENYLNVGLTENQLADMACIALNRIAPRYIRHDIDMSFYMS
HHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC
SEEYQEIQTRVEKAVKKAFKKVKKLDGLERT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA