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The map label for this gene is 78484781

Identifier: 78484781

GI number: 78484781

Start: 489419

End: 490201

Strand: Reverse

Name: 78484781

Synonym: Tcr_0436

Alternate gene names: NA

Gene position: 490201-489419 (Counterclockwise)

Preceding gene: 78484782

Following gene: 78484780

Centisome position: 20.19

GC content: 41.63

Gene sequence:

>783_bases
ATGCATTCTGAGATTTTGATGCCCGTTTATAAAACAGCAAGTTTACTAAGTTTATCAACTCTGCTTTTCCTTATCGTTTC
CTTGCCTGCCAAAGCGATTCAGGCAGATGAACTGGTTCGCCACATTGATAGTCTATGGCGAGGAACGACCTCCCACGCTT
TTATGACCATGAGTGTCAAAACACAACGCTACCAACGCAACATGACAATGGAAGCTTGGTCTCTCGGCAATGATTATTCT
TTGGTTGTCATTCAAAAACCCATTAAAGATCGAGGCATTTCGACTTTAAAAGTGGAACAAAACATCTGGAACTACTTACC
CAAAATCAACCGTGTCACCAAAGTACCGTCAAGCATGATGTCCGGCTCTTGGATGGGAAGCCACTTCACCAATGATGATC
TCGTGAAGGAAAGCACCTTTGAACAGGATTATGATTCGACCATCACATTTGAAGGGCTTCGAAACAATCAAAAAATATAT
GAATTGACCTCTACCCCAAAACCGAATGCCGCGGTCGTTTGGGGAAAAGTTGTGATGCAGATTACGCAAGAAACCTTGGC
CCCTATTAGAGGGCTTTACTATGATGAAGACGGTCAACTTATTCGTACCTTAACATTTGACCAAGTTCAAAAAATCGATG
AGCGAAGTGTTCCCATGCGAATGACATTACAGCCAATGGACAAGCCAACAGAATCAACCGTCATTCTCTACAACGACATT
CAATTCGATATTCCGCTAACCAAAAACTTTTTTTCATTAAGAAATCTTAAACAGCGGCATTAA

Upstream 100 bases:

>100_bases
GGAAAGAACTTAGTTTAGAACTTCATATTTAAAAGCGCCCTCTTTCGTTGACCAAACCGACTCCATTGCTTCATGCCACA
TTTTGCTTTAAGGAGCAGAG

Downstream 100 bases:

>100_bases
GTTCATGAACAATCCGATTTTCAATCGCCTGACCTTATTGCAATTTATAGCCTGGCGAAATATTTGGCGAAACCGGGTCA
GAAGCAGTCTGACGATTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MHSEILMPVYKTASLLSLSTLLFLIVSLPAKAIQADELVRHIDSLWRGTTSHAFMTMSVKTQRYQRNMTMEAWSLGNDYS
LVVIQKPIKDRGISTLKVEQNIWNYLPKINRVTKVPSSMMSGSWMGSHFTNDDLVKESTFEQDYDSTITFEGLRNNQKIY
ELTSTPKPNAAVVWGKVVMQITQETLAPIRGLYYDEDGQLIRTLTFDQVQKIDERSVPMRMTLQPMDKPTESTVILYNDI
QFDIPLTKNFFSLRNLKQRH

Sequences:

>Translated_260_residues
MHSEILMPVYKTASLLSLSTLLFLIVSLPAKAIQADELVRHIDSLWRGTTSHAFMTMSVKTQRYQRNMTMEAWSLGNDYS
LVVIQKPIKDRGISTLKVEQNIWNYLPKINRVTKVPSSMMSGSWMGSHFTNDDLVKESTFEQDYDSTITFEGLRNNQKIY
ELTSTPKPNAAVVWGKVVMQITQETLAPIRGLYYDEDGQLIRTLTFDQVQKIDERSVPMRMTLQPMDKPTESTVILYNDI
QFDIPLTKNFFSLRNLKQRH
>Mature_260_residues
MHSEILMPVYKTASLLSLSTLLFLIVSLPAKAIQADELVRHIDSLWRGTTSHAFMTMSVKTQRYQRNMTMEAWSLGNDYS
LVVIQKPIKDRGISTLKVEQNIWNYLPKINRVTKVPSSMMSGSWMGSHFTNDDLVKESTFEQDYDSTITFEGLRNNQKIY
ELTSTPKPNAAVVWGKVVMQITQETLAPIRGLYYDEDGQLIRTLTFDQVQKIDERSVPMRMTLQPMDKPTESTVILYNDI
QFDIPLTKNFFSLRNLKQRH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30006; Mature: 30006

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSEILMPVYKTASLLSLSTLLFLIVSLPAKAIQADELVRHIDSLWRGTTSHAFMTMSVK
CCCCEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEH
TQRYQRNMTMEAWSLGNDYSLVVIQKPIKDRGISTLKVEQNIWNYLPKINRVTKVPSSMM
HHHHHHCCCEEEEECCCCEEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCHHHH
SGSWMGSHFTNDDLVKESTFEQDYDSTITFEGLRNNQKIYELTSTPKPNAAVVWGKVVMQ
CCCCCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCCCEEEEECCCCCCCEEEHHHHHHHH
ITQETLAPIRGLYYDEDGQLIRTLTFDQVQKIDERSVPMRMTLQPMDKPTESTVILYNDI
HHHHHHHHHHCCEECCCCCEEEEECHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECE
QFDIPLTKNFFSLRNLKQRH
EEECCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MHSEILMPVYKTASLLSLSTLLFLIVSLPAKAIQADELVRHIDSLWRGTTSHAFMTMSVK
CCCCEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEH
TQRYQRNMTMEAWSLGNDYSLVVIQKPIKDRGISTLKVEQNIWNYLPKINRVTKVPSSMM
HHHHHHCCCEEEEECCCCEEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCHHHH
SGSWMGSHFTNDDLVKESTFEQDYDSTITFEGLRNNQKIYELTSTPKPNAAVVWGKVVMQ
CCCCCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCCCEEEEECCCCCCCEEEHHHHHHHH
ITQETLAPIRGLYYDEDGQLIRTLTFDQVQKIDERSVPMRMTLQPMDKPTESTVILYNDI
HHHHHHHHHHCCEECCCCCEEEEECHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECE
QFDIPLTKNFFSLRNLKQRH
EEECCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA