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The map label for this gene is 78484682

Identifier: 78484682

GI number: 78484682

Start: 383699

End: 385399

Strand: Reverse

Name: 78484682

Synonym: Tcr_0337

Alternate gene names: NA

Gene position: 385399-383699 (Counterclockwise)

Preceding gene: 78484683

Following gene: 78484670

Centisome position: 15.87

GC content: 33.8

Gene sequence:

>1701_bases
ATGTCAAAATCAGAAAACCCACAATTGCAAAGCATAAAAGCTCAAGCAAATACCCTACACAGACTTTTAAACATTCAGCA
GCACGAAGCTCTAAGAATTATATCTAAAGCTTTTTATCACTGCGCAAGCTATGAAGATCTCCGCCAGAGAATAAAAGATA
ACAAAACAAACTCAAGGTGGTTTGAGATTGCAAGCATTTCGAATCAGTCATCTCCAGAAAAGCTTGCCTTATTTAAAAAA
TATGTCCCTATTTTTGGCAGTCGACTAAGTGAAGAAATTTTATGCAATACCAATAGATTAGGTCTAAACCGCCTCATTTA
TAAAATTTTTAACCTGACTATTCCTGAAGACACTTTAGAACATATATTTCCTAGCTTTAAAACCACCGGCTGGGAAGCGC
TAGTCGATAGCGAAATTGCCCCATCGTCCATACTTGTGAATAGCCTTCAATTGAACAATATTACCTATCGCCTCTTAGCA
ATAAGAACATTCATGCCCGGTTCTTGGCATTTTGACACTCCTGAACACCAAACGATTGCTGAATTATTAGACCCGCAAAC
AGCAGAAGAATTTATTTTTTGCAAATTTAGTAATGACCTTCTGAAAAAATCCGTTTTTGAATACATATCGTTAGTAGGCA
CTCTAGAAGAAAATGATGAAGACTTTGACCTACCCGATTTTTCATTACCCTTCGTAGCATTAACAAACAAAGAAAAACAG
TATCAAAACTTACTATTAGAATTACTAAAAATCACTGGAGATCCATCACACAACCTCGATTTTTATCCGACTCCAATGTC
TTTGAAAGATGAGCAATCAACCTATCTCGTATTTGGATATCCCATTGGTGAAAAAAAATCCACCTGCGTAAATTCTTGGC
GAGCACTACCTGACAAAGATCCCGACAATGATTCTCACACTATCATTCTCGATAAACAAACTCCTGTTGCTCTTGAGCGG
ATATCTATAGATAAAGAAACCCTGCAACACAAAGGTCAATACCCAGAATACTTTGAAGAAGTACGCAAACTATTGTCTAT
ACAAGAAAATTTTTCATATGCAATAAATGATGACAAAAAAACGCCAAAACTGATATTTTTTAGGCCAGCTACACAGCTTG
ATATTAAAAGCGATTTAGAATTAGAAATACCAAAAAAGCCTGGCATTGAAAGCTGGACAATAAAGGTCACAAACTCAGAT
TTTTTGGAAAGAATAATTAATAAAATTGTACGTTCAGACCTATTCATCTATGTTGATAAATATGATCGACAAAAAATCAT
CTGCAAACTTAATTTAAATACAAAGAACAAAACAAACATCTCTGCACTTTTAAAAATCAGTTCAAGTAAAAGTTTTACAA
CAATTAATTTGATTGAATCAACACAGTCAATAATTCATACGTCAAATGAAACAACAGTTTATTTAACCTTGAATTTGGCC
TTTCTAGAGTTTATAAAATTAATCAACAAAAACAAAATTATCAGCTCAATCAGAAATGGCTTAATAAATTATGTAAAAGA
AGGGACACTAGATTCTATTGCTCTTTCAGGCTTTACTCGCACCAACATTTCTACAAATTTCCTTCCGACCCTTCCTAAGG
AAGAATCAGAACTACTAAACTCGTTTGACGCCTTTAATCTAAATCTAAGTTCATTTTTTGACAACATAATAGACAACACA
TATGAAAGAGATTCATTTTAA

Upstream 100 bases:

>100_bases
ACTCCCATAACAACACATTTTCATTTCTTAATGAATTCTGCAATAAATTTAGCAAAGGACGTTGGATTCCTTAGCTGATA
AAAAATTATTGGAGAATTAA

Downstream 100 bases:

>100_bases
TTACCCTTAAATAGCTGGACCATCGTTTATTATGGTGGTTCCGCGAGCACAAATATATAAATGAGAATATCCTCTTCATT
AAGGTTACAGAAAGAAGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 566; Mature: 565

Protein sequence:

>566_residues
MSKSENPQLQSIKAQANTLHRLLNIQQHEALRIISKAFYHCASYEDLRQRIKDNKTNSRWFEIASISNQSSPEKLALFKK
YVPIFGSRLSEEILCNTNRLGLNRLIYKIFNLTIPEDTLEHIFPSFKTTGWEALVDSEIAPSSILVNSLQLNNITYRLLA
IRTFMPGSWHFDTPEHQTIAELLDPQTAEEFIFCKFSNDLLKKSVFEYISLVGTLEENDEDFDLPDFSLPFVALTNKEKQ
YQNLLLELLKITGDPSHNLDFYPTPMSLKDEQSTYLVFGYPIGEKKSTCVNSWRALPDKDPDNDSHTIILDKQTPVALER
ISIDKETLQHKGQYPEYFEEVRKLLSIQENFSYAINDDKKTPKLIFFRPATQLDIKSDLELEIPKKPGIESWTIKVTNSD
FLERIINKIVRSDLFIYVDKYDRQKIICKLNLNTKNKTNISALLKISSSKSFTTINLIESTQSIIHTSNETTVYLTLNLA
FLEFIKLINKNKIISSIRNGLINYVKEGTLDSIALSGFTRTNISTNFLPTLPKEESELLNSFDAFNLNLSSFFDNIIDNT
YERDSF

Sequences:

>Translated_566_residues
MSKSENPQLQSIKAQANTLHRLLNIQQHEALRIISKAFYHCASYEDLRQRIKDNKTNSRWFEIASISNQSSPEKLALFKK
YVPIFGSRLSEEILCNTNRLGLNRLIYKIFNLTIPEDTLEHIFPSFKTTGWEALVDSEIAPSSILVNSLQLNNITYRLLA
IRTFMPGSWHFDTPEHQTIAELLDPQTAEEFIFCKFSNDLLKKSVFEYISLVGTLEENDEDFDLPDFSLPFVALTNKEKQ
YQNLLLELLKITGDPSHNLDFYPTPMSLKDEQSTYLVFGYPIGEKKSTCVNSWRALPDKDPDNDSHTIILDKQTPVALER
ISIDKETLQHKGQYPEYFEEVRKLLSIQENFSYAINDDKKTPKLIFFRPATQLDIKSDLELEIPKKPGIESWTIKVTNSD
FLERIINKIVRSDLFIYVDKYDRQKIICKLNLNTKNKTNISALLKISSSKSFTTINLIESTQSIIHTSNETTVYLTLNLA
FLEFIKLINKNKIISSIRNGLINYVKEGTLDSIALSGFTRTNISTNFLPTLPKEESELLNSFDAFNLNLSSFFDNIIDNT
YERDSF
>Mature_565_residues
SKSENPQLQSIKAQANTLHRLLNIQQHEALRIISKAFYHCASYEDLRQRIKDNKTNSRWFEIASISNQSSPEKLALFKKY
VPIFGSRLSEEILCNTNRLGLNRLIYKIFNLTIPEDTLEHIFPSFKTTGWEALVDSEIAPSSILVNSLQLNNITYRLLAI
RTFMPGSWHFDTPEHQTIAELLDPQTAEEFIFCKFSNDLLKKSVFEYISLVGTLEENDEDFDLPDFSLPFVALTNKEKQY
QNLLLELLKITGDPSHNLDFYPTPMSLKDEQSTYLVFGYPIGEKKSTCVNSWRALPDKDPDNDSHTIILDKQTPVALERI
SIDKETLQHKGQYPEYFEEVRKLLSIQENFSYAINDDKKTPKLIFFRPATQLDIKSDLELEIPKKPGIESWTIKVTNSDF
LERIINKIVRSDLFIYVDKYDRQKIICKLNLNTKNKTNISALLKISSSKSFTTINLIESTQSIIHTSNETTVYLTLNLAF
LEFIKLINKNKIISSIRNGLINYVKEGTLDSIALSGFTRTNISTNFLPTLPKEESELLNSFDAFNLNLSSFFDNIIDNTY
ERDSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65222; Mature: 65091

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSENPQLQSIKAQANTLHRLLNIQQHEALRIISKAFYHCASYEDLRQRIKDNKTNSRW
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCE
FEIASISNQSSPEKLALFKKYVPIFGSRLSEEILCNTNRLGLNRLIYKIFNLTIPEDTLE
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHH
HIFPSFKTTGWEALVDSEIAPSSILVNSLQLNNITYRLLAIRTFMPGSWHFDTPEHQTIA
HHCCCCCCCCHHHHHCCCCCCHHHEEEEEEECCCEEEEEEEHHCCCCCCCCCCCCHHHHH
ELLDPQTAEEFIFCKFSNDLLKKSVFEYISLVGTLEENDEDFDLPDFSLPFVALTNKEKQ
HHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHH
YQNLLLELLKITGDPSHNLDFYPTPMSLKDEQSTYLVFGYPIGEKKSTCVNSWRALPDKD
HHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCC
PDNDSHTIILDKQTPVALERISIDKETLQHKGQYPEYFEEVRKLLSIQENFSYAINDDKK
CCCCCCEEEEECCCCCCHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEECCCCC
TPKLIFFRPATQLDIKSDLELEIPKKPGIESWTIKVTNSDFLERIINKIVRSDLFIYVDK
CCEEEEECCCCCCCCCCCCEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEEC
YDRQKIICKLNLNTKNKTNISALLKISSSKSFTTINLIESTQSIIHTSNETTVYLTLNLA
CCCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEHHHHHHHHCCCCCEEEEEEEHHH
FLEFIKLINKNKIISSIRNGLINYVKEGTLDSIALSGFTRTNISTNFLPTLPKEESELLN
HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHEECCEEECCCCCCCCCCCCCHHHHHHH
SFDAFNLNLSSFFDNIIDNTYERDSF
HHHHCCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SKSENPQLQSIKAQANTLHRLLNIQQHEALRIISKAFYHCASYEDLRQRIKDNKTNSRW
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCE
FEIASISNQSSPEKLALFKKYVPIFGSRLSEEILCNTNRLGLNRLIYKIFNLTIPEDTLE
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHH
HIFPSFKTTGWEALVDSEIAPSSILVNSLQLNNITYRLLAIRTFMPGSWHFDTPEHQTIA
HHCCCCCCCCHHHHHCCCCCCHHHEEEEEEECCCEEEEEEEHHCCCCCCCCCCCCHHHHH
ELLDPQTAEEFIFCKFSNDLLKKSVFEYISLVGTLEENDEDFDLPDFSLPFVALTNKEKQ
HHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHH
YQNLLLELLKITGDPSHNLDFYPTPMSLKDEQSTYLVFGYPIGEKKSTCVNSWRALPDKD
HHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCC
PDNDSHTIILDKQTPVALERISIDKETLQHKGQYPEYFEEVRKLLSIQENFSYAINDDKK
CCCCCCEEEEECCCCCCHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEECCCCC
TPKLIFFRPATQLDIKSDLELEIPKKPGIESWTIKVTNSDFLERIINKIVRSDLFIYVDK
CCEEEEECCCCCCCCCCCCEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEEC
YDRQKIICKLNLNTKNKTNISALLKISSSKSFTTINLIESTQSIIHTSNETTVYLTLNLA
CCCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEHHHHHHHHCCCCCEEEEEEEHHH
FLEFIKLINKNKIISSIRNGLINYVKEGTLDSIALSGFTRTNISTNFLPTLPKEESELLN
HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHEECCEEECCCCCCCCCCCCCHHHHHHH
SFDAFNLNLSSFFDNIIDNTYERDSF
HHHHCCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA