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The map label for this gene is 78484670

Identifier: 78484670

GI number: 78484670

Start: 365195

End: 365908

Strand: Reverse

Name: 78484670

Synonym: Tcr_0325

Alternate gene names: NA

Gene position: 365908-365195 (Counterclockwise)

Preceding gene: 78484682

Following gene: 78484669

Centisome position: 15.07

GC content: 44.26

Gene sequence:

>714_bases
ATGAACTTTCGATCTGTTCTTTTTTTAATCTGTCTTACCGGTTTATTTTTCTCGCGCATCGTCCAGGCGGAAGAGACATT
ACTGAATTTTAACCAAATCGATTTTTCTGTCACTCAAAGCCAACACGTGACGAACGATGTTGCCCACATTCGCCTGATCG
CTCAAACGGAACACAAAGAGGCTAACGAGGTACAACGCCTGATCAATCAAAAAATGCGTCATGCCCAGAAGGTCTTGAGC
CGTTATCCGGAAATAACCGCCACCACACAGGATTATCGAGTCGTACCTGTCTATGATGACCATCAACAAATCCAACACTG
GAAAGGGCAACAAACTCTTAATCTCACGCTTAAAAATCAGCCAGGCCTGGCTGATATTCTAAGCCAACTGCAACCGTATC
TTAATTATAACGATATGCAGTTTTCCGTTTCAGAAGCACAGCGTGAACAAACCATGACATCTTTGCTAACAAGTGCATTG
GCACAATACCAAACCAAAGCCAAATTAATTGCCGATGCGTTTGATCAATCAAGCTATCGAATCACACAGACACACATCCA
ACAACCGAATCCTCCGCAGCCTTTTCGAGTGACCGCAAATGCTTACGCGGCCAAAATGTCTTCAACAGATGTGTCGCCGG
CAATCAAAACCGGTGCGTCTCGTTTAAGCATCACTGTGTCTGGACGCGTGTTAATTTCAAACCTGAAAAACTGA

Upstream 100 bases:

>100_bases
TTCTCACGTTTCGCGCGAAAAGAAATGCATCAGATGGTTTAATTGTTCAAATAGGCCGCATTATAGCATTGTTCCGATTT
CTTTAAACAGGAGCCCGAAA

Downstream 100 bases:

>100_bases
TTTGCAGACATGCCAACGGCCTATTTTACAAAGGGATCGGACAGTGTCATTCCACGCTAGGGTTTTGTTATAATAAGACT
TTTGCTTTCATAACCGACAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MNFRSVLFLICLTGLFFSRIVQAEETLLNFNQIDFSVTQSQHVTNDVAHIRLIAQTEHKEANEVQRLINQKMRHAQKVLS
RYPEITATTQDYRVVPVYDDHQQIQHWKGQQTLNLTLKNQPGLADILSQLQPYLNYNDMQFSVSEAQREQTMTSLLTSAL
AQYQTKAKLIADAFDQSSYRITQTHIQQPNPPQPFRVTANAYAAKMSSTDVSPAIKTGASRLSITVSGRVLISNLKN

Sequences:

>Translated_237_residues
MNFRSVLFLICLTGLFFSRIVQAEETLLNFNQIDFSVTQSQHVTNDVAHIRLIAQTEHKEANEVQRLINQKMRHAQKVLS
RYPEITATTQDYRVVPVYDDHQQIQHWKGQQTLNLTLKNQPGLADILSQLQPYLNYNDMQFSVSEAQREQTMTSLLTSAL
AQYQTKAKLIADAFDQSSYRITQTHIQQPNPPQPFRVTANAYAAKMSSTDVSPAIKTGASRLSITVSGRVLISNLKN
>Mature_237_residues
MNFRSVLFLICLTGLFFSRIVQAEETLLNFNQIDFSVTQSQHVTNDVAHIRLIAQTEHKEANEVQRLINQKMRHAQKVLS
RYPEITATTQDYRVVPVYDDHQQIQHWKGQQTLNLTLKNQPGLADILSQLQPYLNYNDMQFSVSEAQREQTMTSLLTSAL
AQYQTKAKLIADAFDQSSYRITQTHIQQPNPPQPFRVTANAYAAKMSSTDVSPAIKTGASRLSITVSGRVLISNLKN

Specific function: Unknown

COG id: COG3471

COG function: function code S; Predicted periplasmic/secreted protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26924; Mature: 26924

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFRSVLFLICLTGLFFSRIVQAEETLLNFNQIDFSVTQSQHVTNDVAHIRLIAQTEHKE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHEEEEECCCCCC
ANEVQRLINQKMRHAQKVLSRYPEITATTQDYRVVPVYDDHQQIQHWKGQQTLNLTLKNQ
HHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEECCHHHHHHCCCCEEEEEEECCC
PGLADILSQLQPYLNYNDMQFSVSEAQREQTMTSLLTSALAQYQTKAKLIADAFDQSSYR
CCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
ITQTHIQQPNPPQPFRVTANAYAAKMSSTDVSPAIKTGASRLSITVSGRVLISNLKN
EEHHHCCCCCCCCCEEEEHHHHHHHCCCCCCCHHHHCCCCEEEEEEECEEEECCCCC
>Mature Secondary Structure
MNFRSVLFLICLTGLFFSRIVQAEETLLNFNQIDFSVTQSQHVTNDVAHIRLIAQTEHKE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHEEEEECCCCCC
ANEVQRLINQKMRHAQKVLSRYPEITATTQDYRVVPVYDDHQQIQHWKGQQTLNLTLKNQ
HHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEECCHHHHHHCCCCEEEEEEECCC
PGLADILSQLQPYLNYNDMQFSVSEAQREQTMTSLLTSALAQYQTKAKLIADAFDQSSYR
CCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
ITQTHIQQPNPPQPFRVTANAYAAKMSSTDVSPAIKTGASRLSITVSGRVLISNLKN
EEHHHCCCCCCCCCEEEEHHHHHHHCCCCCCCHHHHCCCCEEEEEEECEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA