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The map label for this gene is nylB' [H]

Identifier: 78484683

GI number: 78484683

Start: 386588

End: 387928

Strand: Reverse

Name: nylB' [H]

Synonym: Tcr_0338

Alternate gene names: 78484683

Gene position: 387928-386588 (Counterclockwise)

Preceding gene: 78484685

Following gene: 78484682

Centisome position: 15.98

GC content: 40.27

Gene sequence:

>1341_bases
ATGAAAAACCTACAAATCAAAGTAAGACGTATATCAGTCATAAGTGTATTGACCATCTTTATATCATCTCTTACTTTTAC
TCAACTTTCAGTTGCTGATGATAAGTATGCCACCGCTAAAGAGCTTAAGCTTATGCAGGGATTCCCTCCTCCTCCGGATA
AGCGCGTAAACAAATCTAATGCGTTGCTCAACGGACCTTATAATCGATGGTCGTATCTGCATATGCGCATGCTTTATCCA
TCTGCGCCCATTCCTGCCGCACCAAAGTCCATTCCGCTTAAAAAGGCTATTGATAAAAGCGTCGGGACAATAAAAATAAA
AGAACCGGGTACAGGTAAAATGACCGACATGGCTACTTTTTTGAAAAAGACTTATACAGATTCATTGGTAGTTATTCATG
ACAACAAAATCATTTATGAAAAGTTTCTGAATGGTATGACCCCGAACCAGCCGCACCAAATGATGTCTGTAACAAAATCA
TTTTGTGGTCTTCTCGCTGAAATGGCTGTTGCTGACGGCAAAATGAAAGAAAGTGATCCTGTTGTGAAGTATGTTCCTGA
GCTAAAAAAAGCCAGTGCGTTTGCAGATGCAACTGTTGGTCAAGTGCTTGATATGACAAACTCAATGGATTTTACTGAAG
ATTATGCCGACCCAAGATCGGGTATCCGTCAGTATGGCGCCGTAATCGGGTGGACAGCTAAAGAGCCAGACATAAAGTAT
GCAAATAGCTTGTACGGCTATCTTCAGACGCTAAAAATAGACAAACATTACAAACACGGAGAAATCTTCCACTATCAGAC
ACCTAAAACTGATGTTGTAAACTGGATAACGAACCGAGTTAACAATGAGTCATTTCAAGATGCTATGTATGATCAACTTT
GGTCAAAACTGGGAACCGAAGGTCGAACTTACATACTACTTGACGGCAACGCTACTCTCGTCGCTGGTGGTGGGTTAAAT
GCAACACCGTACAATCTGGCCCGATTTGCGACAATGATGATTAATAATGGTAAGTTTCATGGCAAGCAAGTCGTACCAGC
ATCTGTTATTAAGACACTTGCTAAAGGCGGTAGTATTAAAGCCTTTGATAATGGACCCGACTCAGATGGGATAGTTCACC
CAAAAGGCGAGTGGAGTTATCGAGCTCAATGGTGGGTTAAACATACGAAAGGTATGAAAGCATTCATGGCTATTGGTATT
CATGGACAATGGATTTATCTAGACCCTACACATAAGATAGCCATCATCAAACAATCATCTCAGCCTGTATCAAAAGATGA
TTATTTGAATGGATATGATTTAAATGCCTTTTACGCAATAGTTTCACACTTTAAAAACTAA

Upstream 100 bases:

>100_bases
TTTACATGATTACCAAAGCAAAATTTACGCAGGCAACCGAGCTTACAATTACTCAAAGTACAACCTAAATATTTTGTTGT
TACATTAGGAGGAGAACAAC

Downstream 100 bases:

>100_bases
AAAACTACAACTTGAACAGAAAACTACCTTATGGGTGGTTCTTATGTATAAATAACGCATTTATAATACCTACAGGCACA
GAAACAGCTAACCTCTTTAG

Product: 6-aminohexanoate-dimer hydrolase

Products: NA

Alternate protein names: Nylon oligomers-degrading enzyme EII' [H]

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MKNLQIKVRRISVISVLTIFISSLTFTQLSVADDKYATAKELKLMQGFPPPPDKRVNKSNALLNGPYNRWSYLHMRMLYP
SAPIPAAPKSIPLKKAIDKSVGTIKIKEPGTGKMTDMATFLKKTYTDSLVVIHDNKIIYEKFLNGMTPNQPHQMMSVTKS
FCGLLAEMAVADGKMKESDPVVKYVPELKKASAFADATVGQVLDMTNSMDFTEDYADPRSGIRQYGAVIGWTAKEPDIKY
ANSLYGYLQTLKIDKHYKHGEIFHYQTPKTDVVNWITNRVNNESFQDAMYDQLWSKLGTEGRTYILLDGNATLVAGGGLN
ATPYNLARFATMMINNGKFHGKQVVPASVIKTLAKGGSIKAFDNGPDSDGIVHPKGEWSYRAQWWVKHTKGMKAFMAIGI
HGQWIYLDPTHKIAIIKQSSQPVSKDDYLNGYDLNAFYAIVSHFKN

Sequences:

>Translated_446_residues
MKNLQIKVRRISVISVLTIFISSLTFTQLSVADDKYATAKELKLMQGFPPPPDKRVNKSNALLNGPYNRWSYLHMRMLYP
SAPIPAAPKSIPLKKAIDKSVGTIKIKEPGTGKMTDMATFLKKTYTDSLVVIHDNKIIYEKFLNGMTPNQPHQMMSVTKS
FCGLLAEMAVADGKMKESDPVVKYVPELKKASAFADATVGQVLDMTNSMDFTEDYADPRSGIRQYGAVIGWTAKEPDIKY
ANSLYGYLQTLKIDKHYKHGEIFHYQTPKTDVVNWITNRVNNESFQDAMYDQLWSKLGTEGRTYILLDGNATLVAGGGLN
ATPYNLARFATMMINNGKFHGKQVVPASVIKTLAKGGSIKAFDNGPDSDGIVHPKGEWSYRAQWWVKHTKGMKAFMAIGI
HGQWIYLDPTHKIAIIKQSSQPVSKDDYLNGYDLNAFYAIVSHFKN
>Mature_446_residues
MKNLQIKVRRISVISVLTIFISSLTFTQLSVADDKYATAKELKLMQGFPPPPDKRVNKSNALLNGPYNRWSYLHMRMLYP
SAPIPAAPKSIPLKKAIDKSVGTIKIKEPGTGKMTDMATFLKKTYTDSLVVIHDNKIIYEKFLNGMTPNQPHQMMSVTKS
FCGLLAEMAVADGKMKESDPVVKYVPELKKASAFADATVGQVLDMTNSMDFTEDYADPRSGIRQYGAVIGWTAKEPDIKY
ANSLYGYLQTLKIDKHYKHGEIFHYQTPKTDVVNWITNRVNNESFQDAMYDQLWSKLGTEGRTYILLDGNATLVAGGGLN
ATPYNLARFATMMINNGKFHGKQVVPASVIKTLAKGGSIKAFDNGPDSDGIVHPKGEWSYRAQWWVKHTKGMKAFMAIGI
HGQWIYLDPTHKIAIIKQSSQPVSKDDYLNGYDLNAFYAIVSHFKN

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: =3.5.1.46 [H]

Molecular weight: Translated: 49914; Mature: 49914

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLQIKVRRISVISVLTIFISSLTFTQLSVADDKYATAKELKLMQGFPPPPDKRVNKSN
CCCCEEEEEHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCC
ALLNGPYNRWSYLHMRMLYPSAPIPAAPKSIPLKKAIDKSVGTIKIKEPGTGKMTDMATF
CEECCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCHHHHHHH
LKKTYTDSLVVIHDNKIIYEKFLNGMTPNQPHQMMSVTKSFCGLLAEMAVADGKMKESDP
HHHHCCCCEEEEECCEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
VVKYVPELKKASAFADATVGQVLDMTNSMDFTEDYADPRSGIRQYGAVIGWTAKEPDIKY
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHCCEEEECCCCCCCHH
ANSLYGYLQTLKIDKHYKHGEIFHYQTPKTDVVNWITNRVNNESFQDAMYDQLWSKLGTE
HHHHHHHHHHHEECCCCCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
GRTYILLDGNATLVAGGGLNATPYNLARFATMMINNGKFHGKQVVPASVIKTLAKGGSIK
CCEEEEECCCEEEEECCCCCCCCHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHCCCCEE
AFDNGPDSDGIVHPKGEWSYRAQWWVKHTKGMKAFMAIGIHGQWIYLDPTHKIAIIKQSS
ECCCCCCCCCEECCCCCCCEEEEEEEHHHCCCEEEEEEEECCEEEEECCCCEEEEEECCC
QPVSKDDYLNGYDLNAFYAIVSHFKN
CCCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKNLQIKVRRISVISVLTIFISSLTFTQLSVADDKYATAKELKLMQGFPPPPDKRVNKSN
CCCCEEEEEHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCC
ALLNGPYNRWSYLHMRMLYPSAPIPAAPKSIPLKKAIDKSVGTIKIKEPGTGKMTDMATF
CEECCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCHHHHHHH
LKKTYTDSLVVIHDNKIIYEKFLNGMTPNQPHQMMSVTKSFCGLLAEMAVADGKMKESDP
HHHHCCCCEEEEECCEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
VVKYVPELKKASAFADATVGQVLDMTNSMDFTEDYADPRSGIRQYGAVIGWTAKEPDIKY
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHCCEEEECCCCCCCHH
ANSLYGYLQTLKIDKHYKHGEIFHYQTPKTDVVNWITNRVNNESFQDAMYDQLWSKLGTE
HHHHHHHHHHHEECCCCCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
GRTYILLDGNATLVAGGGLNATPYNLARFATMMINNGKFHGKQVVPASVIKTLAKGGSIK
CCEEEEECCCEEEEECCCCCCCCHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHCCCCEE
AFDNGPDSDGIVHPKGEWSYRAQWWVKHTKGMKAFMAIGIHGQWIYLDPTHKIAIIKQSS
ECCCCCCCCCEECCCCCCCEEEEEEEHHHCCCEEEEEEEECCEEEEECCCCEEEEEECCC
QPVSKDDYLNGYDLNAFYAIVSHFKN
CCCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 6646204; 6389532; 1879421 [H]