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The map label for this gene is 78484668

Identifier: 78484668

GI number: 78484668

Start: 361409

End: 362191

Strand: Reverse

Name: 78484668

Synonym: Tcr_0323

Alternate gene names: NA

Gene position: 362191-361409 (Counterclockwise)

Preceding gene: 78484669

Following gene: 78484624

Centisome position: 14.92

GC content: 40.87

Gene sequence:

>783_bases
ATGCAAAAATTAATTTGGCAAATGCTCCTTCTGTGGTGCTTTACTTCCCCATTATTGGCTGCGACCTCTAATACGGACTG
GCAAAATATTAAATATATAGAGCGTGCATTCATCGAGGTGGCTTTAAAAAATGAATATCGTCAAACCGATATGCGACTGA
TTAAGTGGGGCGTACCCATCCGTTACCAGTTCAGCTACCTTGGCCTCCCCAACAATCCTTTTATCGAAAATTTGGCTGTA
ACGCATTTAAAACAACTTCATACAATTACCAACCATCCCATCAATCAAGCTACAGCCGGGCAATCCGCCAATCTTCAAAT
TATTTTCACGAAAGATCAACATTACCAGGAAGCCATACACCGTTACATTCAAAAAGAATCGAAAGCGTTAAGCCGCAAAA
GTAATTGCTCCGCTAGCTTTCAGCTGAATCGACAACATGAAATCATTGGTGCAAACGTGGTTATTCCAGTAGATTATGTG
ATGAGTCGTGGTTTATTACCGGCCTGCATCGTAGAAGAAACGACTCAAATCATGGGGTTGCCGAACGATTCCGACTGGGT
TTTCCCGAGTATTGCCAACGATAAGAGTCAACTGGATTTACTTACTGGGTTGGATTATATTTTACTCAAATTGCTCTATT
CCCCCAGCTTGAAACCCGGAATGAACCTGCAACAAATACGTCCTATTCTACGTTCATTATTACATCAATGGAAAATAGCC
AAACTGATTCAAAATGCCAGCCAAAAAGTTAAAGAATCAGGCCTTTACCCACTCATCTATTAA

Upstream 100 bases:

>100_bases
AAAGATTTTGAGTTAATTCATCTTATCTTACTGTCGGTTTAAAACAGCCAGGCCTGGCTGTTTTAAACCAATCAACCCAG
ACTGTATTCGAGGCCGCTGA

Downstream 100 bases:

>100_bases
GAGTCTGTCTTGGCCAGATCCTGAATCACCAAGCCCGCGAGCATAAGCCCAAAAATACCTGGCATATAACTGGCTGTTCC
ATTCACAACCCGCCCTCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MQKLIWQMLLLWCFTSPLLAATSNTDWQNIKYIERAFIEVALKNEYRQTDMRLIKWGVPIRYQFSYLGLPNNPFIENLAV
THLKQLHTITNHPINQATAGQSANLQIIFTKDQHYQEAIHRYIQKESKALSRKSNCSASFQLNRQHEIIGANVVIPVDYV
MSRGLLPACIVEETTQIMGLPNDSDWVFPSIANDKSQLDLLTGLDYILLKLLYSPSLKPGMNLQQIRPILRSLLHQWKIA
KLIQNASQKVKESGLYPLIY

Sequences:

>Translated_260_residues
MQKLIWQMLLLWCFTSPLLAATSNTDWQNIKYIERAFIEVALKNEYRQTDMRLIKWGVPIRYQFSYLGLPNNPFIENLAV
THLKQLHTITNHPINQATAGQSANLQIIFTKDQHYQEAIHRYIQKESKALSRKSNCSASFQLNRQHEIIGANVVIPVDYV
MSRGLLPACIVEETTQIMGLPNDSDWVFPSIANDKSQLDLLTGLDYILLKLLYSPSLKPGMNLQQIRPILRSLLHQWKIA
KLIQNASQKVKESGLYPLIY
>Mature_260_residues
MQKLIWQMLLLWCFTSPLLAATSNTDWQNIKYIERAFIEVALKNEYRQTDMRLIKWGVPIRYQFSYLGLPNNPFIENLAV
THLKQLHTITNHPINQATAGQSANLQIIFTKDQHYQEAIHRYIQKESKALSRKSNCSASFQLNRQHEIIGANVVIPVDYV
MSRGLLPACIVEETTQIMGLPNDSDWVFPSIANDKSQLDLLTGLDYILLKLLYSPSLKPGMNLQQIRPILRSLLHQWKIA
KLIQNASQKVKESGLYPLIY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29948; Mature: 29948

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKLIWQMLLLWCFTSPLLAATSNTDWQNIKYIERAFIEVALKNEYRQTDMRLIKWGVPI
CHHHHHHHHHHHHHCCHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
RYQFSYLGLPNNPFIENLAVTHLKQLHTITNHPINQATAGQSANLQIIFTKDQHYQEAIH
EEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHH
RYIQKESKALSRKSNCSASFQLNRQHEIIGANVVIPVDYVMSRGLLPACIVEETTQIMGL
HHHHHHHHHHHHHCCCCEEEEECCCCEEECCCEEEEHHHHHHCCCCHHHHHHHHHHHCCC
PNDSDWVFPSIANDKSQLDLLTGLDYILLKLLYSPSLKPGMNLQQIRPILRSLLHQWKIA
CCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
KLIQNASQKVKESGLYPLIY
HHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQKLIWQMLLLWCFTSPLLAATSNTDWQNIKYIERAFIEVALKNEYRQTDMRLIKWGVPI
CHHHHHHHHHHHHHCCHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
RYQFSYLGLPNNPFIENLAVTHLKQLHTITNHPINQATAGQSANLQIIFTKDQHYQEAIH
EEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHH
RYIQKESKALSRKSNCSASFQLNRQHEIIGANVVIPVDYVMSRGLLPACIVEETTQIMGL
HHHHHHHHHHHHHCCCCEEEEECCCCEEECCCEEEEHHHHHHCCCCHHHHHHHHHHHCCC
PNDSDWVFPSIANDKSQLDLLTGLDYILLKLLYSPSLKPGMNLQQIRPILRSLLHQWKIA
CCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
KLIQNASQKVKESGLYPLIY
HHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA