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The map label for this gene is 78484432

Identifier: 78484432

GI number: 78484432

Start: 113207

End: 114802

Strand: Reverse

Name: 78484432

Synonym: Tcr_0087

Alternate gene names: NA

Gene position: 114802-113207 (Counterclockwise)

Preceding gene: 78484433

Following gene: 78484431

Centisome position: 4.73

GC content: 36.15

Gene sequence:

>1596_bases
ATGCCGAAAGTTGACTCTTTGAAAGCTGTAAAAAACGTAAATACACCAAGAGATTGCTATCTTGATGAGCTTGAACGCAG
ATATAGTAAAGAAAAGCTGTCCGAAACATTTACCACCTTTGAGGAATATGTAAATGAGGTATACGCAGAGACATGGTATT
TTGGAAAAAATGCATACCATAACAGACTTCATTTAAAAAAAGTGTATGAATTAGGGCTTGAGCATGATGACACAACGCTA
ATTCTTGAATTTCTAAAATACTCAGCAAAGACAAGAATGCCTAATACTTTTAGAGGACATTTTGATACGGTGGTAAATAT
ACTTCAGAAGCATGATGTCAAAATGCTTTACGATCTCCAATTTATTAAAGCAATATGGCCAAATCTTTCTCGTACAAATA
GGAGAGACTGGTCTAGTATATTCAAAATACTGCACAGTGAACTTCACTTAGAGCAGTTTAAAGAACAAAGAGAGTGGGTT
TCAAACAATTTGCCGAAAAAAAAGAAAGTAAATCCCCATGACCCGGTAAATGGTGCTTATCCAGATGAAGTATTCAATAG
CTTTTTAGATAAAGCTATGGGTAAAGTGGTTAAGACCTATCGCAATAGCTCTGTTAATCCAGCAGACCAAAATAAATTTC
ATGTCTACTCTGGATCGGTCTTTGAAGTAATGAGCTTAATAAGCAGCAGAAGACACGCTCAAATTTCACAATGTAAAATT
GTTGATATTTCGCCCTACGCAAAAGATGAAAACCTTCTTCAAATTATCTTTTATAAATCAAAATCTCGCATTGGGGGGTT
TAGAGCTAGCTCAGAAAAGGTTCCTTTTGTATTTTCTGAATTATTTAGCTCGGTTCTTAGCGACTACTTGAAAATCTACC
ATAATCATATTAAAGCTTTGTGCGAGAGATTTGGTTATAAGAAAGAAGTTCCTTGGCAAAACTACCCCTTATTTCCCCGT
TTTTTTTCATCGAAAGAATCATTAAGCCTACCGAAAATTCATACCAATGATATGCACAGAAACCTGGGCAAGTATGCGGT
TCGTTACCTTGAAATAAGTATTAACCGAATCAGACATACAACCATTACCAGGGGCATGGAACTTGGTCTTGAAAAAGAAA
AACTTGCCGCATTAACTGGAGTGACTTTGCCAGCAGTAGGCCATTATCAAGACCTTACCCCTCAATCAAGGAGGCTTATA
AACGAAAAGTTTTCAAAAAACAGCCTTCTAAAATCAGCATTTACATGGAATTTAGCTGAGTATACAGAGCATTTTGGAAG
AATAATTCATGATGAATTTGGAGTTGAGGTTGGAAAAGCTCATGATGAAGTGTCGTGCAATTCTTGCTCAAAAAAATTAG
GGGCTCCAATGGGATGTTATAACTGTGGAGCAGACCAGTTTCTTCCTGCTATTGAAGGAAATCATAAGGCTCAACTAATT
AAAGCTCAAGCCAAAAGATTATTTTTAGAAACTTCTGGGGCAACCAATCACCAAGTATTCGAAATTGACACCGTTATTAA
AAGAATCGAAATGGTTATTGAGGCAGTAAATCAATTCCAGACCAAGTTACAAAAGGCTGTGACTGATGATAAATAA

Upstream 100 bases:

>100_bases
TACAATGACTACAAAATTGCTTGTATAGCGAGAGATTACCACTTGCAAAGACAACGTGAACAAGGTCAAAGATTCAAAGC
AATAAATAATGGGAGTCGTC

Downstream 100 bases:

>100_bases
ACACAAAAAAAATGCTCTTAACTTAGTCCGAAAAACAAAAGTAGCCTTCGACAAGACAACTCCCATGTTGAAGCTAAATG
CAAATACCGATCAGGCAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 531; Mature: 530

Protein sequence:

>531_residues
MPKVDSLKAVKNVNTPRDCYLDELERRYSKEKLSETFTTFEEYVNEVYAETWYFGKNAYHNRLHLKKVYELGLEHDDTTL
ILEFLKYSAKTRMPNTFRGHFDTVVNILQKHDVKMLYDLQFIKAIWPNLSRTNRRDWSSIFKILHSELHLEQFKEQREWV
SNNLPKKKKVNPHDPVNGAYPDEVFNSFLDKAMGKVVKTYRNSSVNPADQNKFHVYSGSVFEVMSLISSRRHAQISQCKI
VDISPYAKDENLLQIIFYKSKSRIGGFRASSEKVPFVFSELFSSVLSDYLKIYHNHIKALCERFGYKKEVPWQNYPLFPR
FFSSKESLSLPKIHTNDMHRNLGKYAVRYLEISINRIRHTTITRGMELGLEKEKLAALTGVTLPAVGHYQDLTPQSRRLI
NEKFSKNSLLKSAFTWNLAEYTEHFGRIIHDEFGVEVGKAHDEVSCNSCSKKLGAPMGCYNCGADQFLPAIEGNHKAQLI
KAQAKRLFLETSGATNHQVFEIDTVIKRIEMVIEAVNQFQTKLQKAVTDDK

Sequences:

>Translated_531_residues
MPKVDSLKAVKNVNTPRDCYLDELERRYSKEKLSETFTTFEEYVNEVYAETWYFGKNAYHNRLHLKKVYELGLEHDDTTL
ILEFLKYSAKTRMPNTFRGHFDTVVNILQKHDVKMLYDLQFIKAIWPNLSRTNRRDWSSIFKILHSELHLEQFKEQREWV
SNNLPKKKKVNPHDPVNGAYPDEVFNSFLDKAMGKVVKTYRNSSVNPADQNKFHVYSGSVFEVMSLISSRRHAQISQCKI
VDISPYAKDENLLQIIFYKSKSRIGGFRASSEKVPFVFSELFSSVLSDYLKIYHNHIKALCERFGYKKEVPWQNYPLFPR
FFSSKESLSLPKIHTNDMHRNLGKYAVRYLEISINRIRHTTITRGMELGLEKEKLAALTGVTLPAVGHYQDLTPQSRRLI
NEKFSKNSLLKSAFTWNLAEYTEHFGRIIHDEFGVEVGKAHDEVSCNSCSKKLGAPMGCYNCGADQFLPAIEGNHKAQLI
KAQAKRLFLETSGATNHQVFEIDTVIKRIEMVIEAVNQFQTKLQKAVTDDK
>Mature_530_residues
PKVDSLKAVKNVNTPRDCYLDELERRYSKEKLSETFTTFEEYVNEVYAETWYFGKNAYHNRLHLKKVYELGLEHDDTTLI
LEFLKYSAKTRMPNTFRGHFDTVVNILQKHDVKMLYDLQFIKAIWPNLSRTNRRDWSSIFKILHSELHLEQFKEQREWVS
NNLPKKKKVNPHDPVNGAYPDEVFNSFLDKAMGKVVKTYRNSSVNPADQNKFHVYSGSVFEVMSLISSRRHAQISQCKIV
DISPYAKDENLLQIIFYKSKSRIGGFRASSEKVPFVFSELFSSVLSDYLKIYHNHIKALCERFGYKKEVPWQNYPLFPRF
FSSKESLSLPKIHTNDMHRNLGKYAVRYLEISINRIRHTTITRGMELGLEKEKLAALTGVTLPAVGHYQDLTPQSRRLIN
EKFSKNSLLKSAFTWNLAEYTEHFGRIIHDEFGVEVGKAHDEVSCNSCSKKLGAPMGCYNCGADQFLPAIEGNHKAQLIK
AQAKRLFLETSGATNHQVFEIDTVIKRIEMVIEAVNQFQTKLQKAVTDDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61610; Mature: 61479

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PKVDSLKAVKNVNTPRDCYLDELERRYSKEKLSETFTTFEEYVNEVYAETWYFGKNAYH
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
NRLHLKKVYELGLEHDDTTLILEFLKYSAKTRMPNTFRGHFDTVVNILQKHDVKMLYDLQ
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHH
FIKAIWPNLSRTNRRDWSSIFKILHSELHLEQFKEQREWVSNNLPKKKKVNPHDPVNGAY
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDEVFNSFLDKAMGKVVKTYRNSSVNPADQNKFHVYSGSVFEVMSLISSRRHAQISQCKI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCHHCEEE
VDISPYAKDENLLQIIFYKSKSRIGGFRASSEKVPFVFSELFSSVLSDYLKIYHNHIKAL
EECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
CERFGYKKEVPWQNYPLFPRFFSSKESLSLPKIHTNDMHRNLGKYAVRYLEISINRIRHT
HHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TITRGMELGLEKEKLAALTGVTLPAVGHYQDLTPQSRRLINEKFSKNSLLKSAFTWNLAE
HHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
YTEHFGRIIHDEFGVEVGKAHDEVSCNSCSKKLGAPMGCYNCGADQFLPAIEGNHKAQLI
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHH
KAQAKRLFLETSGATNHQVFEIDTVIKRIEMVIEAVNQFQTKLQKAVTDDK
HHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA