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The map label for this gene is 78484431

Identifier: 78484431

GI number: 78484431

Start: 110878

End: 113217

Strand: Reverse

Name: 78484431

Synonym: Tcr_0086

Alternate gene names: NA

Gene position: 113217-110878 (Counterclockwise)

Preceding gene: 78484432

Following gene: 78484430

Centisome position: 4.66

GC content: 37.44

Gene sequence:

>2340_bases
ATGATAAATAAACACAAAAAAAATGCTCTTAACTTAGTCCGAAAAACAAAAGTAGCCTTCGACAAGACAACTCCCATGTT
GAAGCTAAATGCAAATACCGATCAGGCAGCAAAATGGAACGAAGACTGGCGATCTTTTCACCAAGGTTTACCTATTAAAT
TCTATTTTCAGAAATGGGCTACAAACTCCGATAGCTCCAACCTTGACTTAGCGAGGGTCTATGCAATCGAATCTTTAGCT
ACAAACAAAGGAATAAAAAATATTACATCAACCCTCCGGTATGCCACAAGAGCTTTAGGAGAGTTAACTAAAGACATAAG
CGAATTGGAGCAAAGTGATTTTGATAACCTGTCAAAGGCTTTCAACAAAAAGGGGTTTTCTGAAACGCATGCATCAATAT
TTTGGACATGGTGCAAAAAATGCGAACTTATCCCCGAATACCTCTCGACACCTTCAAAATCTGACTCCAGGGATAGAAGT
GCGGGAGAGGCAGAAAAAAGAAGAAAGAAAAAGCTTTTAGATGATGAACAAGTAGCAGCTATCGGAGTGGCTTACAACGA
ACTATTTTCTGATGACGGTTTGAAGAAATACAGCTTTCGAGAATATTCAAAAGAGTATTTTACATTGGCTTTTTTGACGC
TATCAGCATCAAGCCCTTCGCGTATGGATTCAGAAATTTTTGCTCTTCCGGAGCAAAAACTGAAGACACATATTGATGAA
GACGGTGTTGAGACTCATAGCTTATTCTGGAAAGGATCAAAAGGCCACGAAGATAACCGTACGCACATTCTAGGGGCACT
AAAAGACCATGTTGAAAAGGTTATCGAAGTCGTCGGGAAGGAATCCTTGCCAGCTAAAATTTTATCGTGGTTTATGTCAA
GGCCTGATAGCTCTCTGAATGATGTAATGCAGACTTTTCCAGAGTTCAACTTCAAGCACCAAAATTATCCGAACTTGAGT
TTAGATATAAAAACCAACATTTTCCATTTAGGCTTGATTTTAGGCTTTTATGACGATGACCCTGAGATACCTGTATTGCA
TGGTGGATATCTCATTCGAAGAGCTGGCAAGAAAAGAAGTTGGAAGCTTTTTGAGAAGCTTAGTAAGTTAAAAAACAATG
ACAAAATTGCTCGAGACTTATATGTAATGGGGCTTTTTACAAAAAGCTTGAAAGATTCTGTTAGGTTGAGTGATTTATCA
AAGACCTTCCACAAGGTTGAATCGGTATTATTCAGAGAAGGACAAAACTTCACCACCTTGCTCGAACAATCTAACCGCAT
AATCGAAAAAAATAAGAATTTAAACGGTTCTGTGGATACGATCACAAGAGGCTCTGTTCAAACAAAAGTTCAAGATGCTA
TGTTTGTGTTTACACAGCTCATGCTAAACAATTCTCGCATTAGAAATCCACATACTTTTGCATATAAATCCATTACAGAT
GTAAATCATGATGTGATTCCAGCTATGTATGACCTTCAGATTAGTACTAAACGCCCCGAATTCTCAGAGAAATTTATAAA
GAAAGCTTTGGCTGTTGTTGGGCTTGAAGATATGTCATTTTCCCCGCATAAAATAAGACATTACATAAATCATCATGCTA
GTGAAAGCGGAATCCCTATAGAAATCATTAACTTGTGGTCTGGTCGTAAGGATGCCGATCAAGCTTATGAATATATCCAT
ACTACAGATGAAGATAATGCAGAAATAATAAGAACCGCTTTAGTTAAGACAGAAGGTTTTGAGGCTTCAGAAGCAAAAGA
GATTAAGTTAATAAGTCTAGAGAAACTTCAAGAATTAAGAAAATTACCTGCCGCTGTAATGTCAGAAGGAGTTTGTATTC
AAGACTTAGCAACCATGCCTTGTCGATACTTGAATGACTTTATGACAAGTTGTTTCGGCTGCTCGCAAATGTGTTATATC
AAAGGGGATGGGAAAGTTTTAGGTACTTTGAATAAGGATTTAGGGATTCAAGTGGCCAGACTAAGGAATGTAGAATCTCA
ACCTGGCTTTACAAACAATAAAGCTTCTCAAAAATGGTATGAAATACACTTTAGTAGAACTTCGGTCCTCAAGTCCTTGA
TTGATATTCTTTCTGATGACAGTATTCCAAATGGTTCAAGCGTAAAAATAGTTGGCGATTTATCTTCATCTACAATAAGC
TTTAAAACTCAGAATCTGGACACCGGAGAAGTGACCACTAAGCAAGTTCTACTTCAAGATAGTACAAAAGAGCTAAAAAC
GCTAATTGATAATGAAGAGTTAAAATCCAAGAAAGAGACTGGTAATTCAAATCCAGCTTTAACGGACCTATTAGCCAGCT
ATGGAGTTGCTAATGGCTAA

Upstream 100 bases:

>100_bases
AATCACCAAGTATTCGAAATTGACACCGTTATTAAAAGAATCGAAATGGTTATTGAGGCAGTAAATCAATTCCAGACCAA
GTTACAAAAGGCTGTGACTG

Downstream 100 bases:

>100_bases
AATTAATATTGACCGACGAGTAAAGATAGAGCGCCAAGTAGAAATTAAAATTATAGCGATGCTTAGACGGTGGAATTCTA
AGATAACTTGGGATTTACTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 779; Mature: 779

Protein sequence:

>779_residues
MINKHKKNALNLVRKTKVAFDKTTPMLKLNANTDQAAKWNEDWRSFHQGLPIKFYFQKWATNSDSSNLDLARVYAIESLA
TNKGIKNITSTLRYATRALGELTKDISELEQSDFDNLSKAFNKKGFSETHASIFWTWCKKCELIPEYLSTPSKSDSRDRS
AGEAEKRRKKKLLDDEQVAAIGVAYNELFSDDGLKKYSFREYSKEYFTLAFLTLSASSPSRMDSEIFALPEQKLKTHIDE
DGVETHSLFWKGSKGHEDNRTHILGALKDHVEKVIEVVGKESLPAKILSWFMSRPDSSLNDVMQTFPEFNFKHQNYPNLS
LDIKTNIFHLGLILGFYDDDPEIPVLHGGYLIRRAGKKRSWKLFEKLSKLKNNDKIARDLYVMGLFTKSLKDSVRLSDLS
KTFHKVESVLFREGQNFTTLLEQSNRIIEKNKNLNGSVDTITRGSVQTKVQDAMFVFTQLMLNNSRIRNPHTFAYKSITD
VNHDVIPAMYDLQISTKRPEFSEKFIKKALAVVGLEDMSFSPHKIRHYINHHASESGIPIEIINLWSGRKDADQAYEYIH
TTDEDNAEIIRTALVKTEGFEASEAKEIKLISLEKLQELRKLPAAVMSEGVCIQDLATMPCRYLNDFMTSCFGCSQMCYI
KGDGKVLGTLNKDLGIQVARLRNVESQPGFTNNKASQKWYEIHFSRTSVLKSLIDILSDDSIPNGSSVKIVGDLSSSTIS
FKTQNLDTGEVTTKQVLLQDSTKELKTLIDNEELKSKKETGNSNPALTDLLASYGVANG

Sequences:

>Translated_779_residues
MINKHKKNALNLVRKTKVAFDKTTPMLKLNANTDQAAKWNEDWRSFHQGLPIKFYFQKWATNSDSSNLDLARVYAIESLA
TNKGIKNITSTLRYATRALGELTKDISELEQSDFDNLSKAFNKKGFSETHASIFWTWCKKCELIPEYLSTPSKSDSRDRS
AGEAEKRRKKKLLDDEQVAAIGVAYNELFSDDGLKKYSFREYSKEYFTLAFLTLSASSPSRMDSEIFALPEQKLKTHIDE
DGVETHSLFWKGSKGHEDNRTHILGALKDHVEKVIEVVGKESLPAKILSWFMSRPDSSLNDVMQTFPEFNFKHQNYPNLS
LDIKTNIFHLGLILGFYDDDPEIPVLHGGYLIRRAGKKRSWKLFEKLSKLKNNDKIARDLYVMGLFTKSLKDSVRLSDLS
KTFHKVESVLFREGQNFTTLLEQSNRIIEKNKNLNGSVDTITRGSVQTKVQDAMFVFTQLMLNNSRIRNPHTFAYKSITD
VNHDVIPAMYDLQISTKRPEFSEKFIKKALAVVGLEDMSFSPHKIRHYINHHASESGIPIEIINLWSGRKDADQAYEYIH
TTDEDNAEIIRTALVKTEGFEASEAKEIKLISLEKLQELRKLPAAVMSEGVCIQDLATMPCRYLNDFMTSCFGCSQMCYI
KGDGKVLGTLNKDLGIQVARLRNVESQPGFTNNKASQKWYEIHFSRTSVLKSLIDILSDDSIPNGSSVKIVGDLSSSTIS
FKTQNLDTGEVTTKQVLLQDSTKELKTLIDNEELKSKKETGNSNPALTDLLASYGVANG
>Mature_779_residues
MINKHKKNALNLVRKTKVAFDKTTPMLKLNANTDQAAKWNEDWRSFHQGLPIKFYFQKWATNSDSSNLDLARVYAIESLA
TNKGIKNITSTLRYATRALGELTKDISELEQSDFDNLSKAFNKKGFSETHASIFWTWCKKCELIPEYLSTPSKSDSRDRS
AGEAEKRRKKKLLDDEQVAAIGVAYNELFSDDGLKKYSFREYSKEYFTLAFLTLSASSPSRMDSEIFALPEQKLKTHIDE
DGVETHSLFWKGSKGHEDNRTHILGALKDHVEKVIEVVGKESLPAKILSWFMSRPDSSLNDVMQTFPEFNFKHQNYPNLS
LDIKTNIFHLGLILGFYDDDPEIPVLHGGYLIRRAGKKRSWKLFEKLSKLKNNDKIARDLYVMGLFTKSLKDSVRLSDLS
KTFHKVESVLFREGQNFTTLLEQSNRIIEKNKNLNGSVDTITRGSVQTKVQDAMFVFTQLMLNNSRIRNPHTFAYKSITD
VNHDVIPAMYDLQISTKRPEFSEKFIKKALAVVGLEDMSFSPHKIRHYINHHASESGIPIEIINLWSGRKDADQAYEYIH
TTDEDNAEIIRTALVKTEGFEASEAKEIKLISLEKLQELRKLPAAVMSEGVCIQDLATMPCRYLNDFMTSCFGCSQMCYI
KGDGKVLGTLNKDLGIQVARLRNVESQPGFTNNKASQKWYEIHFSRTSVLKSLIDILSDDSIPNGSSVKIVGDLSSSTIS
FKTQNLDTGEVTTKQVLLQDSTKELKTLIDNEELKSKKETGNSNPALTDLLASYGVANG

Specific function: Unknown

COG id: COG4688

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 88324; Mature: 88324

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINKHKKNALNLVRKTKVAFDKTTPMLKLNANTDQAAKWNEDWRSFHQGLPIKFYFQKWA
CCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCEEEEEHHHC
TNSDSSNLDLARVYAIESLATNKGIKNITSTLRYATRALGELTKDISELEQSDFDNLSKA
CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
FNKKGFSETHASIFWTWCKKCELIPEYLSTPSKSDSRDRSAGEAEKRRKKKLLDDEQVAA
HHCCCCCHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHH
IGVAYNELFSDDGLKKYSFREYSKEYFTLAFLTLSASSPSRMDSEIFALPEQKLKTHIDE
HHHHHHHHHCCCCCCHHHHHHHHHHHEEEEEEEEECCCCCCCCCHHHHCCHHHHHHCCCC
DGVETHSLFWKGSKGHEDNRTHILGALKDHVEKVIEVVGKESLPAKILSWFMSRPDSSLN
CCCCCHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHH
DVMQTFPEFNFKHQNYPNLSLDIKTNIFHLGLILGFYDDDPEIPVLHGGYLIRRAGKKRS
HHHHHCCCCCCCCCCCCCEEEEEECCCEEEEHEEEEECCCCCCEEEECCHHEECCCCCCH
WKLFEKLSKLKNNDKIARDLYVMGLFTKSLKDSVRLSDLSKTFHKVESVLFREGQNFTTL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LEQSNRIIEKNKNLNGSVDTITRGSVQTKVQDAMFVFTQLMLNNSRIRNPHTFAYKSITD
HHHCCHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCC
VNHDVIPAMYDLQISTKRPEFSEKFIKKALAVVGLEDMSFSPHKIRHYINHHASESGIPI
CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCE
EIINLWSGRKDADQAYEYIHTTDEDNAEIIRTALVKTEGFEASEAKEIKLISLEKLQELR
EEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHH
KLPAAVMSEGVCIQDLATMPCRYLNDFMTSCFGCSQMCYIKGDGKVLGTLNKDLGIQVAR
HHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCEEHHH
LRNVESQPGFTNNKASQKWYEIHFSRTSVLKSLIDILSDDSIPNGSSVKIVGDLSSSTIS
HHCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEE
FKTQNLDTGEVTTKQVLLQDSTKELKTLIDNEELKSKKETGNSNPALTDLLASYGVANG
EEECCCCCCCHHHHHHHHHCCHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MINKHKKNALNLVRKTKVAFDKTTPMLKLNANTDQAAKWNEDWRSFHQGLPIKFYFQKWA
CCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCEEEEEHHHC
TNSDSSNLDLARVYAIESLATNKGIKNITSTLRYATRALGELTKDISELEQSDFDNLSKA
CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
FNKKGFSETHASIFWTWCKKCELIPEYLSTPSKSDSRDRSAGEAEKRRKKKLLDDEQVAA
HHCCCCCHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHH
IGVAYNELFSDDGLKKYSFREYSKEYFTLAFLTLSASSPSRMDSEIFALPEQKLKTHIDE
HHHHHHHHHCCCCCCHHHHHHHHHHHEEEEEEEEECCCCCCCCCHHHHCCHHHHHHCCCC
DGVETHSLFWKGSKGHEDNRTHILGALKDHVEKVIEVVGKESLPAKILSWFMSRPDSSLN
CCCCCHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHH
DVMQTFPEFNFKHQNYPNLSLDIKTNIFHLGLILGFYDDDPEIPVLHGGYLIRRAGKKRS
HHHHHCCCCCCCCCCCCCEEEEEECCCEEEEHEEEEECCCCCCEEEECCHHEECCCCCCH
WKLFEKLSKLKNNDKIARDLYVMGLFTKSLKDSVRLSDLSKTFHKVESVLFREGQNFTTL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LEQSNRIIEKNKNLNGSVDTITRGSVQTKVQDAMFVFTQLMLNNSRIRNPHTFAYKSITD
HHHCCHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCC
VNHDVIPAMYDLQISTKRPEFSEKFIKKALAVVGLEDMSFSPHKIRHYINHHASESGIPI
CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCE
EIINLWSGRKDADQAYEYIHTTDEDNAEIIRTALVKTEGFEASEAKEIKLISLEKLQELR
EEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHH
KLPAAVMSEGVCIQDLATMPCRYLNDFMTSCFGCSQMCYIKGDGKVLGTLNKDLGIQVAR
HHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCEEHHH
LRNVESQPGFTNNKASQKWYEIHFSRTSVLKSLIDILSDDSIPNGSSVKIVGDLSSSTIS
HHCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEE
FKTQNLDTGEVTTKQVLLQDSTKELKTLIDNEELKSKKETGNSNPALTDLLASYGVANG
EEECCCCCCCHHHHHHHHHCCHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA