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The map label for this gene is 78484433

Identifier: 78484433

GI number: 78484433

Start: 114789

End: 116072

Strand: Reverse

Name: 78484433

Synonym: Tcr_0088

Alternate gene names: NA

Gene position: 116072-114789 (Counterclockwise)

Preceding gene: 78484434

Following gene: 78484432

Centisome position: 4.78

GC content: 37.38

Gene sequence:

>1284_bases
ATGAACGTAGTGATGTACAGGAAAGATGGAAAAACTTATTGGAACATTGTTAATGAACAATACTTACCAGTTAACGCTTT
AATTTCTCACTACCTACAAGTCTACCTGGGAAGTAAGTCTGCCAACACTAAAAAACGAAAAGCTTACGACCTCCTATTTT
CCCTGACGTATTTCGATAGCATGAAAATTGACCTTATACATAGAATAGAAAGTTTTGAACTTCTGACAGAGCCAGAGATA
AATAGCTTTTTTAAATCATGCAAACTAAGGAAGAACGTAGTTACTTCATTAAATACTACTTCTCTACTAACAAGCATTGG
TCTAAGAAACCTAATTGCAAGAGACCTTCCAACAAGCAATATTGTTGAAACGGAGACAGCCAAAGAACGAGTAGATACAT
TTTGGTCTTTTATTAATTATGTCTATGGGCGGAGACATGGAAGATATGTGCTGACCAAAGAGCAAGAAGCTAATTATAGG
CAATTCAAAATCAACTTAGCCACAGCAAGAAACTCCATGGGGAACTGGTCAAAACAAACAAACGATCCTATTGAGTCGAG
ACTTCCTGATGAAAAATACTTTGAACTACTTGAAGTTATAAAACCCAATAATGACAAAAATCCTTTCAAGGGGTCAAAGC
TGCGGAATGAAATAATTGTTAAGCTGATTATTGAAACAGGTGTAAGACGAGGCGTAGTAGCAAAGTTAAAGATAAGCGAT
GTATTTAACGACAAATCTCCTCGTATCAGAGTTACCAGAACACCTGACGATTCTGCCGACCCAAGGAGAGACAGACCTTC
TCAAAAAACAAAAGCCCATGTTTCGGCAATCTCACCGGAGTTAGCTCAAAGAATTGAATACTACATTGTGAATGTAAGGA
ACAATCTTCCTAGGGCAACAGAGCACGAGTTTGTCTTTGTATCAGAGAAGAACAGTAAAGATACAAGTGGTAATCCTTTA
TCTCAAATCAGTATAAATAGTATTTTCTCAAAGTTAAGCAAAACCCTTGGCTTAAAAATTACCCCACACATGATAAGGCA
CAAGTGGAATGAAATTTTTGATGATGGTATGGCAAGTTTAGCTAGAGATATGGGGTTTGACAGCAAAAGAATTGAAGATG
TCCGCAAGTATGCTATGGGTTGGTCGGCTAAATCGGAAATGGCTGAAGTATACAATGACTACAAAATTGCTTGTATAGCG
AGAGATTACCACTTGCAAAGACAACGTGAACAAGGTCAAAGATTCAAAGCAATAAATAATGGGAGTCGTCATGCCGAAAG
TTGA

Upstream 100 bases:

>100_bases
AAACCTTACGACTAATTAATGTAGATTATTATTAAATTTAAAATGCAAACTTTTTTGCAATCATCGCTTATAACCAATGA
AATATTTCGGAAACTAAAAA

Downstream 100 bases:

>100_bases
CTCTTTGAAAGCTGTAAAAAACGTAAATACACCAAGAGATTGCTATCTTGATGAGCTTGAACGCAGATATAGTAAAGAAA
AGCTGTCCGAAACATTTACC

Product: Phage integrase

Products: NA

Alternate protein names: Phage Integrase; Integrase Family Protein; Integrase; Site-Specific Recombinase Phage Integrase Family; Integrase/Recombinase

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MNVVMYRKDGKTYWNIVNEQYLPVNALISHYLQVYLGSKSANTKKRKAYDLLFSLTYFDSMKIDLIHRIESFELLTEPEI
NSFFKSCKLRKNVVTSLNTTSLLTSIGLRNLIARDLPTSNIVETETAKERVDTFWSFINYVYGRRHGRYVLTKEQEANYR
QFKINLATARNSMGNWSKQTNDPIESRLPDEKYFELLEVIKPNNDKNPFKGSKLRNEIIVKLIIETGVRRGVVAKLKISD
VFNDKSPRIRVTRTPDDSADPRRDRPSQKTKAHVSAISPELAQRIEYYIVNVRNNLPRATEHEFVFVSEKNSKDTSGNPL
SQISINSIFSKLSKTLGLKITPHMIRHKWNEIFDDGMASLARDMGFDSKRIEDVRKYAMGWSAKSEMAEVYNDYKIACIA
RDYHLQRQREQGQRFKAINNGSRHAES

Sequences:

>Translated_427_residues
MNVVMYRKDGKTYWNIVNEQYLPVNALISHYLQVYLGSKSANTKKRKAYDLLFSLTYFDSMKIDLIHRIESFELLTEPEI
NSFFKSCKLRKNVVTSLNTTSLLTSIGLRNLIARDLPTSNIVETETAKERVDTFWSFINYVYGRRHGRYVLTKEQEANYR
QFKINLATARNSMGNWSKQTNDPIESRLPDEKYFELLEVIKPNNDKNPFKGSKLRNEIIVKLIIETGVRRGVVAKLKISD
VFNDKSPRIRVTRTPDDSADPRRDRPSQKTKAHVSAISPELAQRIEYYIVNVRNNLPRATEHEFVFVSEKNSKDTSGNPL
SQISINSIFSKLSKTLGLKITPHMIRHKWNEIFDDGMASLARDMGFDSKRIEDVRKYAMGWSAKSEMAEVYNDYKIACIA
RDYHLQRQREQGQRFKAINNGSRHAES
>Mature_427_residues
MNVVMYRKDGKTYWNIVNEQYLPVNALISHYLQVYLGSKSANTKKRKAYDLLFSLTYFDSMKIDLIHRIESFELLTEPEI
NSFFKSCKLRKNVVTSLNTTSLLTSIGLRNLIARDLPTSNIVETETAKERVDTFWSFINYVYGRRHGRYVLTKEQEANYR
QFKINLATARNSMGNWSKQTNDPIESRLPDEKYFELLEVIKPNNDKNPFKGSKLRNEIIVKLIIETGVRRGVVAKLKISD
VFNDKSPRIRVTRTPDDSADPRRDRPSQKTKAHVSAISPELAQRIEYYIVNVRNNLPRATEHEFVFVSEKNSKDTSGNPL
SQISINSIFSKLSKTLGLKITPHMIRHKWNEIFDDGMASLARDMGFDSKRIEDVRKYAMGWSAKSEMAEVYNDYKIACIA
RDYHLQRQREQGQRFKAINNGSRHAES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49528; Mature: 49528

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVVMYRKDGKTYWNIVNEQYLPVNALISHYLQVYLGSKSANTKKRKAYDLLFSLTYFDS
CCEEEEECCCCEEEHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC
MKIDLIHRIESFELLTEPEINSFFKSCKLRKNVVTSLNTTSLLTSIGLRNLIARDLPTSN
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC
IVETETAKERVDTFWSFINYVYGRRHGRYVLTKEQEANYRQFKINLATARNSMGNWSKQT
CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEEHHHHCCCCCCCCCC
NDPIESRLPDEKYFELLEVIKPNNDKNPFKGSKLRNEIIVKLIIETGVRRGVVAKLKISD
CCCHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEHH
VFNDKSPRIRVTRTPDDSADPRRDRPSQKTKAHVSAISPELAQRIEYYIVNVRNNLPRAT
HHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHEEEEECCCCCCCC
EHEFVFVSEKNSKDTSGNPLSQISINSIFSKLSKTLGLKITPHMIRHKWNEIFDDGMASL
CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
ARDMGFDSKRIEDVRKYAMGWSAKSEMAEVYNDYKIACIARDYHLQRQREQGQRFKAINN
HHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEHHHHHHHHHHHCCHHHHHCC
GSRHAES
CCCCCCC
>Mature Secondary Structure
MNVVMYRKDGKTYWNIVNEQYLPVNALISHYLQVYLGSKSANTKKRKAYDLLFSLTYFDS
CCEEEEECCCCEEEHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC
MKIDLIHRIESFELLTEPEINSFFKSCKLRKNVVTSLNTTSLLTSIGLRNLIARDLPTSN
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC
IVETETAKERVDTFWSFINYVYGRRHGRYVLTKEQEANYRQFKINLATARNSMGNWSKQT
CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEEHHHHCCCCCCCCCC
NDPIESRLPDEKYFELLEVIKPNNDKNPFKGSKLRNEIIVKLIIETGVRRGVVAKLKISD
CCCHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEHH
VFNDKSPRIRVTRTPDDSADPRRDRPSQKTKAHVSAISPELAQRIEYYIVNVRNNLPRAT
HHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHEEEEECCCCCCCC
EHEFVFVSEKNSKDTSGNPLSQISINSIFSKLSKTLGLKITPHMIRHKWNEIFDDGMASL
CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
ARDMGFDSKRIEDVRKYAMGWSAKSEMAEVYNDYKIACIARDYHLQRQREQGQRFKAINN
HHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEHHHHHHHHHHHCCHHHHHCC
GSRHAES
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA