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The map label for this gene is 78484419

Identifier: 78484419

GI number: 78484419

Start: 93207

End: 94256

Strand: Reverse

Name: 78484419

Synonym: Tcr_0073

Alternate gene names: NA

Gene position: 94256-93207 (Counterclockwise)

Preceding gene: 78484420

Following gene: 78484418

Centisome position: 3.88

GC content: 46.29

Gene sequence:

>1050_bases
ATGAACCTGACTGATCTAACCAGCATTTGGCAACAATTTGAATTTATTTGGCCGTGGATGATTGCGTTTGCGCCGCTACC
ATGGCTTATCAGAATACTCTTAAAGCCGGCCGTTCAACGTCAAACACCCTTGTTAGCGCCCCATTTAATGCAACGGCTAC
GACATACCCCGCAACCACAATTCGTTCAAGCAAACCGACGATCCATTAAGATTCCATTGACTGGCATTTTCTTATGGTCG
TTAGTCGTCCTTGCCGCAATGCGACCGGTCTGGTTTTTGAATACCACCCCCTTTCAAGCCAGTGGAAAAGATTTGATGTT
GGCCGTCGATTTGTCTGGCAGTATGGAAAAAACCGACATGCCATTGAGAGGCGTCGAAGTCGATCGACTCACTGCGGTCA
AATCGGTGGTCAAAAACTTCATTCAAAAACGGCAAGGCGATCGGATGGGGTTGGTGGTTTTTGGAAGCCAGGCCTTTTTA
CAAAGCCCACTGACTTACGACCTGAATACCGTCGAAACCTTATTAAACGAAACCGAAATCGGCATGGCCGGTAACAATAC
GGCGATTGGTGATGCCATTGGTATCGCCTTAAAACATTTACATCAAAACTCTGAAAAAAAGGCCGTGTTGATTCTGCTAA
CGGATGGGTCGAATACCGCGGGTGCGGTTCAGCCTTTAGATGCGGCCAAGCAAGCTCAAGAAATGGGACTCAAGATCTAC
ACCATTGGCATCGGTCAAAACCAGGCCACAGGTCTCGATGCGTTTATTTTCGGGCCAAATCGAAACATGGATACCACCAC
TTTACAAAAAATCGCTGAGCTGACCCAAGGGCGGTTTTTTATGGCAAAGGACACCAATCAGTTAAATGAAATTTACCAAC
TGATCGATCAATTAGAGGCTTCTCAACACGACATTAATAATTACCGTTTGCGGGAAGAGCTTTTTATCTGGCCGCTGGGG
CTGACTTTTCTGCTCAGTTTACTGTTGATGGGACTAAAACTCTATCCACTTCCTCACGCTGTTAAAAATACGCCTGAGGG
AGAAACGTAA

Upstream 100 bases:

>100_bases
ATTGCTTAGAATCCATTTATCGTCCAAACTCGTCTTTGTCGGACGCCGAAACCCAACAAGCATTGGAGTATGCGATGCAA
TGGATCAAAGGACACCATAA

Downstream 100 bases:

>100_bases
TGGAAGCGACGTTGCACTTCTTACGCCCACTTTGGTTAATCGGTTTTATTCCGACCTTTTGGCTCATTTGGAAGCTCTGG
CAAATGACCGGCCAAAAAGG

Product: von Willebrand factor, type A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MNLTDLTSIWQQFEFIWPWMIAFAPLPWLIRILLKPAVQRQTPLLAPHLMQRLRHTPQPQFVQANRRSIKIPLTGIFLWS
LVVLAAMRPVWFLNTTPFQASGKDLMLAVDLSGSMEKTDMPLRGVEVDRLTAVKSVVKNFIQKRQGDRMGLVVFGSQAFL
QSPLTYDLNTVETLLNETEIGMAGNNTAIGDAIGIALKHLHQNSEKKAVLILLTDGSNTAGAVQPLDAAKQAQEMGLKIY
TIGIGQNQATGLDAFIFGPNRNMDTTTLQKIAELTQGRFFMAKDTNQLNEIYQLIDQLEASQHDINNYRLREELFIWPLG
LTFLLSLLLMGLKLYPLPHAVKNTPEGET

Sequences:

>Translated_349_residues
MNLTDLTSIWQQFEFIWPWMIAFAPLPWLIRILLKPAVQRQTPLLAPHLMQRLRHTPQPQFVQANRRSIKIPLTGIFLWS
LVVLAAMRPVWFLNTTPFQASGKDLMLAVDLSGSMEKTDMPLRGVEVDRLTAVKSVVKNFIQKRQGDRMGLVVFGSQAFL
QSPLTYDLNTVETLLNETEIGMAGNNTAIGDAIGIALKHLHQNSEKKAVLILLTDGSNTAGAVQPLDAAKQAQEMGLKIY
TIGIGQNQATGLDAFIFGPNRNMDTTTLQKIAELTQGRFFMAKDTNQLNEIYQLIDQLEASQHDINNYRLREELFIWPLG
LTFLLSLLLMGLKLYPLPHAVKNTPEGET
>Mature_349_residues
MNLTDLTSIWQQFEFIWPWMIAFAPLPWLIRILLKPAVQRQTPLLAPHLMQRLRHTPQPQFVQANRRSIKIPLTGIFLWS
LVVLAAMRPVWFLNTTPFQASGKDLMLAVDLSGSMEKTDMPLRGVEVDRLTAVKSVVKNFIQKRQGDRMGLVVFGSQAFL
QSPLTYDLNTVETLLNETEIGMAGNNTAIGDAIGIALKHLHQNSEKKAVLILLTDGSNTAGAVQPLDAAKQAQEMGLKIY
TIGIGQNQATGLDAFIFGPNRNMDTTTLQKIAELTQGRFFMAKDTNQLNEIYQLIDQLEASQHDINNYRLREELFIWPLG
LTFLLSLLLMGLKLYPLPHAVKNTPEGET

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002035 [H]

Pfam domain/function: PF00092 VWA [H]

EC number: NA

Molecular weight: Translated: 39174; Mature: 39174

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTDLTSIWQQFEFIWPWMIAFAPLPWLIRILLKPAVQRQTPLLAPHLMQRLRHTPQPQ
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
FVQANRRSIKIPLTGIFLWSLVVLAAMRPVWFLNTTPFQASGKDLMLAVDLSGSMEKTDM
CEECCCCEEEEEHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCC
PLRGVEVDRLTAVKSVVKNFIQKRQGDRMGLVVFGSQAFLQSPLTYDLNTVETLLNETEI
CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHCCCCCCCHHHHHHHHHHHHC
GMAGNNTAIGDAIGIALKHLHQNSEKKAVLILLTDGSNTAGAVQPLDAAKQAQEMGLKIY
CCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEE
TIGIGQNQATGLDAFIFGPNRNMDTTTLQKIAELTQGRFFMAKDTNQLNEIYQLIDQLEA
EEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHH
SQHDINNYRLREELFIWPLGLTFLLSLLLMGLKLYPLPHAVKNTPEGET
HHHCCCCCEEHHHHEEEECHHHHHHHHHHHHHEECCCCHHHCCCCCCCC
>Mature Secondary Structure
MNLTDLTSIWQQFEFIWPWMIAFAPLPWLIRILLKPAVQRQTPLLAPHLMQRLRHTPQPQ
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
FVQANRRSIKIPLTGIFLWSLVVLAAMRPVWFLNTTPFQASGKDLMLAVDLSGSMEKTDM
CEECCCCEEEEEHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCC
PLRGVEVDRLTAVKSVVKNFIQKRQGDRMGLVVFGSQAFLQSPLTYDLNTVETLLNETEI
CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHCCCCCCCHHHHHHHHHHHHC
GMAGNNTAIGDAIGIALKHLHQNSEKKAVLILLTDGSNTAGAVQPLDAAKQAQEMGLKIY
CCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEE
TIGIGQNQATGLDAFIFGPNRNMDTTTLQKIAELTQGRFFMAKDTNQLNEIYQLIDQLEA
EEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHH
SQHDINNYRLREELFIWPLGLTFLLSLLLMGLKLYPLPHAVKNTPEGET
HHHCCCCCEEHHHHEEEECHHHHHHHHHHHHHEECCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]