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The map label for this gene is 78484418

Identifier: 78484418

GI number: 78484418

Start: 91213

End: 93207

Strand: Reverse

Name: 78484418

Synonym: Tcr_0072

Alternate gene names: NA

Gene position: 93207-91213 (Counterclockwise)

Preceding gene: 78484419

Following gene: 78484417

Centisome position: 3.84

GC content: 45.81

Gene sequence:

>1995_bases
ATGGAAGCGACGTTGCACTTCTTACGCCCACTTTGGTTAATCGGTTTTATTCCGACCTTTTGGCTCATTTGGAAGCTCTG
GCAAATGACCGGCCAAAAAGGGGCTTGGAATCACATTATTGCCCCGCAATTCAGATCGGTTTTATTGGGCAAAAAATCGG
ACGAAAGTTTTTTCCCGTGGGCCGCACTCGGACTCGCTCTTCTTTGGTCAATCATGATCATTGCTTTATCAGGACCGACA
TGGCAAAAAGTCGAGCTTCCGGCTGAAAAAAATCGTCAAGGCAGTGTCATTCTGTTGGACTTATCTTTATCCATGCTCGC
TGACGATCTCAAGCCGAATCGGCTCAGCCGAGTACGCTATAAAATTCTGGATTTGCTTAAGGCGCACCCGGAAATCAATA
TGGGCATGGTGGCTTATGCCGGTACAGCTCATACCATCGCCCCCATTTCTGAAGATAATCAAACCTTACAGTCTTTAACC
CCGACCTTAACGCCCTTGATTATGCCTCGATTTGGAGCCGATGCCTTGGCCGGTTTTAAAAAAGCCAATGCTTTACTTCA
AGGCGCGAAAGTACAAAAAGGCCATATCATTTGGATCACAGATGATATCGAAAAACCGGAAATTAACACCATAGCGCAAT
TTGTTAAACAGCATCATATTTCCCTTAGCATCTTAGTGGTGGGAACCGCCGATGGCGGCCCGATAAAGGTTCCTGATTAT
GGCTTAGTCAAAGAAGAAGATGGCCGGATTGTAATGGCAAAAGTACCTTTTAAAGATTTTTATACCCTTTCTCAACGCAC
ACAAGCCAATATTTCAACCTTGACGATGCAGCAAACAGATATGGCCGATCTATTGCCTAATGTGCTGATGCAAGCGGCTC
GCTCAAATGAAAAAGACGCAGCGTCGGAAAAAACCCTAACCAGCTGGCTCGATTCAGGCGCTTATTTGCTGTTTGTTATT
CTGCCTCTGGCGGCTTTAGCCTTCCGCCGCGGCTGGGCATTTTCCTGGATAGGCATAGGTCTCGCGACCCTGTTACTGCC
TGCCTTGATGCTGAACCCTTCCTCCAGTTTTGCCAAAGAGAACAAACCCGAAAGCGACTCCAGTACTGCCTTTTCCGATG
TGTTTAAATCGCCTGATCAACAAGGCTATGAAAAATGGCAACAACAGGATTATCAAACCGCCGCAGACCGATTTGAAGAC
CCTCTCTGGAAAGGAGCCAGCCTTTACCGACAAGGCAAATACAAAGAGGCCATTAAACAGTTCAGCTTAGATAAAAGTGC
CAAAGGGCGATACAACCAAGGCAATGCTTTGGCCAAGCAAGGCGATTTCAAAGCGGCTAAAGAACAATATCAGAAAGCCT
TAAAACAAGATCCAAACATGCTGAATGCTAAAAAGAACTTAACGCTGATGGACAAAATTCTGGCGTCACAGAAAAAATCG
GCCGCTAACAACAACACCAAAGATCAAAAGCAATCCAAACAAGGAAAATCACCCGGCAATGCGAATCCGGATGGTGACTC
CCCTAAAAATAAAACAGCCAATGGCAGCCAATCAGGCCAGCAAGGCCGCCAGGACCCTAATGCCTCTGAAACCGGCTCAG
GCAATCAACAAAATGACTTAAACAAACCCTATCAACCCAATCCCAACGAAACGAAACCGACGTCGCCGTCAGAAAACAAA
TCAAACAAAAATACGGATCCAGCCGACAAACCCCCTTCTGCGTCTCAAACCGATTTATCAGACGGCAAAAACTCGGAGAA
AAATTCTAAGTCAGCCAATCAAGCGACAAAACGGTTACAAAAATCGCTCGATTCCAATAACAACCAACAAGCGTCTGAGG
CCTTAACCCAACAACAAGCCGAAACCCAACAGGCACAGAAAAACTGGCTAAACCAAATCCCGGACGAACCTGGCTTGTTT
TTAAAACGTAAATTTGAATACCAATATCAGCAACAAGGCTCCAAAACGGATCGTGAACCCGATAAAATCTGGTAA

Upstream 100 bases:

>100_bases
GGCCGCTGGGGCTGACTTTTCTGCTCAGTTTACTGTTGATGGGACTAAAACTCTATCCACTTCCTCACGCTGTTAAAAAT
ACGCCTGAGGGAGAAACGTA

Downstream 100 bases:

>100_bases
CGATTACAATGGCATTGTTCTTTTAACCGAAATGTTGAGTCAGACTATGGATCGAAACACTAAACAGCAACACTGGCTAA
CCAAACTTATTTTGATTACC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain Protein; Von Willebrand Factor Type A; Transmembrane Protein; TPR Repeat; TPR Domain Protein In Aerotolerance Operon; Tetratricopeptide Repeat Family; TPR Repeat Protein; Unknwon Proteins; Transmembrane TPR Repeat-Containing Protein; Von Willebrand Factor Type A Domain-Containing Protein; Von Willebrand Factor Type A Domain Protein; Tetratricopeptide Repeat And VWA Domain-Containing Protein; Tpr Domain Protein

Number of amino acids: Translated: 664; Mature: 664

Protein sequence:

>664_residues
MEATLHFLRPLWLIGFIPTFWLIWKLWQMTGQKGAWNHIIAPQFRSVLLGKKSDESFFPWAALGLALLWSIMIIALSGPT
WQKVELPAEKNRQGSVILLDLSLSMLADDLKPNRLSRVRYKILDLLKAHPEINMGMVAYAGTAHTIAPISEDNQTLQSLT
PTLTPLIMPRFGADALAGFKKANALLQGAKVQKGHIIWITDDIEKPEINTIAQFVKQHHISLSILVVGTADGGPIKVPDY
GLVKEEDGRIVMAKVPFKDFYTLSQRTQANISTLTMQQTDMADLLPNVLMQAARSNEKDAASEKTLTSWLDSGAYLLFVI
LPLAALAFRRGWAFSWIGIGLATLLLPALMLNPSSSFAKENKPESDSSTAFSDVFKSPDQQGYEKWQQQDYQTAADRFED
PLWKGASLYRQGKYKEAIKQFSLDKSAKGRYNQGNALAKQGDFKAAKEQYQKALKQDPNMLNAKKNLTLMDKILASQKKS
AANNNTKDQKQSKQGKSPGNANPDGDSPKNKTANGSQSGQQGRQDPNASETGSGNQQNDLNKPYQPNPNETKPTSPSENK
SNKNTDPADKPPSASQTDLSDGKNSEKNSKSANQATKRLQKSLDSNNNQQASEALTQQQAETQQAQKNWLNQIPDEPGLF
LKRKFEYQYQQQGSKTDREPDKIW

Sequences:

>Translated_664_residues
MEATLHFLRPLWLIGFIPTFWLIWKLWQMTGQKGAWNHIIAPQFRSVLLGKKSDESFFPWAALGLALLWSIMIIALSGPT
WQKVELPAEKNRQGSVILLDLSLSMLADDLKPNRLSRVRYKILDLLKAHPEINMGMVAYAGTAHTIAPISEDNQTLQSLT
PTLTPLIMPRFGADALAGFKKANALLQGAKVQKGHIIWITDDIEKPEINTIAQFVKQHHISLSILVVGTADGGPIKVPDY
GLVKEEDGRIVMAKVPFKDFYTLSQRTQANISTLTMQQTDMADLLPNVLMQAARSNEKDAASEKTLTSWLDSGAYLLFVI
LPLAALAFRRGWAFSWIGIGLATLLLPALMLNPSSSFAKENKPESDSSTAFSDVFKSPDQQGYEKWQQQDYQTAADRFED
PLWKGASLYRQGKYKEAIKQFSLDKSAKGRYNQGNALAKQGDFKAAKEQYQKALKQDPNMLNAKKNLTLMDKILASQKKS
AANNNTKDQKQSKQGKSPGNANPDGDSPKNKTANGSQSGQQGRQDPNASETGSGNQQNDLNKPYQPNPNETKPTSPSENK
SNKNTDPADKPPSASQTDLSDGKNSEKNSKSANQATKRLQKSLDSNNNQQASEALTQQQAETQQAQKNWLNQIPDEPGLF
LKRKFEYQYQQQGSKTDREPDKIW
>Mature_664_residues
MEATLHFLRPLWLIGFIPTFWLIWKLWQMTGQKGAWNHIIAPQFRSVLLGKKSDESFFPWAALGLALLWSIMIIALSGPT
WQKVELPAEKNRQGSVILLDLSLSMLADDLKPNRLSRVRYKILDLLKAHPEINMGMVAYAGTAHTIAPISEDNQTLQSLT
PTLTPLIMPRFGADALAGFKKANALLQGAKVQKGHIIWITDDIEKPEINTIAQFVKQHHISLSILVVGTADGGPIKVPDY
GLVKEEDGRIVMAKVPFKDFYTLSQRTQANISTLTMQQTDMADLLPNVLMQAARSNEKDAASEKTLTSWLDSGAYLLFVI
LPLAALAFRRGWAFSWIGIGLATLLLPALMLNPSSSFAKENKPESDSSTAFSDVFKSPDQQGYEKWQQQDYQTAADRFED
PLWKGASLYRQGKYKEAIKQFSLDKSAKGRYNQGNALAKQGDFKAAKEQYQKALKQDPNMLNAKKNLTLMDKILASQKKS
AANNNTKDQKQSKQGKSPGNANPDGDSPKNKTANGSQSGQQGRQDPNASETGSGNQQNDLNKPYQPNPNETKPTSPSENK
SNKNTDPADKPPSASQTDLSDGKNSEKNSKSANQATKRLQKSLDSNNNQQASEALTQQQAETQQAQKNWLNQIPDEPGLF
LKRKFEYQYQQQGSKTDREPDKIW

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73834; Mature: 73834

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEATLHFLRPLWLIGFIPTFWLIWKLWQMTGQKGAWNHIIAPQFRSVLLGKKSDESFFPW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCH
AALGLALLWSIMIIALSGPTWQKVELPAEKNRQGSVILLDLSLSMLADDLKPNRLSRVRY
HHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEECHHHHHHHHCCCHHHHHHHH
KILDLLKAHPEINMGMVAYAGTAHTIAPISEDNQTLQSLTPTLTPLIMPRFGADALAGFK
HHHHHHHHCCCCCCCEEEECCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
KANALLQGAKVQKGHIIWITDDIEKPEINTIAQFVKQHHISLSILVVGTADGGPIKVPDY
HHHHHHHCCEECCCEEEEEECCCCCCCHHHHHHHHHHHCCEEEEEEEECCCCCCEECCCC
GLVKEEDGRIVMAKVPFKDFYTLSQRTQANISTLTMQQTDMADLLPNVLMQAARSNEKDA
CCEECCCCCEEEEECCHHHHHHHHHHHHCCHHEEEECHHHHHHHHHHHHHHHHHCCCHHH
ASEKTLTSWLDSGAYLLFVILPLAALAFRRGWAFSWIGIGLATLLLPALMLNPSSSFAKE
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHC
NKPESDSSTAFSDVFKSPDQQGYEKWQQQDYQTAADRFEDPLWKGASLYRQGKYKEAIKQ
CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHCCHHHHHHHH
FSLDKSAKGRYNQGNALAKQGDFKAAKEQYQKALKQDPNMLNAKKNLTLMDKILASQKKS
HCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHH
AANNNTKDQKQSKQGKSPGNANPDGDSPKNKTANGSQSGQQGRQDPNASETGSGNQQNDL
HCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NKPYQPNPNETKPTSPSENKSNKNTDPADKPPSASQTDLSDGKNSEKNSKSANQATKRLQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
KSLDSNNNQQASEALTQQQAETQQAQKNWLNQIPDEPGLFLKRKFEYQYQQQGSKTDREP
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCC
DKIW
CCCC
>Mature Secondary Structure
MEATLHFLRPLWLIGFIPTFWLIWKLWQMTGQKGAWNHIIAPQFRSVLLGKKSDESFFPW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCH
AALGLALLWSIMIIALSGPTWQKVELPAEKNRQGSVILLDLSLSMLADDLKPNRLSRVRY
HHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEECHHHHHHHHCCCHHHHHHHH
KILDLLKAHPEINMGMVAYAGTAHTIAPISEDNQTLQSLTPTLTPLIMPRFGADALAGFK
HHHHHHHHCCCCCCCEEEECCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
KANALLQGAKVQKGHIIWITDDIEKPEINTIAQFVKQHHISLSILVVGTADGGPIKVPDY
HHHHHHHCCEECCCEEEEEECCCCCCCHHHHHHHHHHHCCEEEEEEEECCCCCCEECCCC
GLVKEEDGRIVMAKVPFKDFYTLSQRTQANISTLTMQQTDMADLLPNVLMQAARSNEKDA
CCEECCCCCEEEEECCHHHHHHHHHHHHCCHHEEEECHHHHHHHHHHHHHHHHHCCCHHH
ASEKTLTSWLDSGAYLLFVILPLAALAFRRGWAFSWIGIGLATLLLPALMLNPSSSFAKE
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHC
NKPESDSSTAFSDVFKSPDQQGYEKWQQQDYQTAADRFEDPLWKGASLYRQGKYKEAIKQ
CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHCCHHHHHHHH
FSLDKSAKGRYNQGNALAKQGDFKAAKEQYQKALKQDPNMLNAKKNLTLMDKILASQKKS
HCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHH
AANNNTKDQKQSKQGKSPGNANPDGDSPKNKTANGSQSGQQGRQDPNASETGSGNQQNDL
HCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NKPYQPNPNETKPTSPSENKSNKNTDPADKPPSASQTDLSDGKNSEKNSKSANQATKRLQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
KSLDSNNNQQASEALTQQQAETQQAQKNWLNQIPDEPGLFLKRKFEYQYQQQGSKTDREP
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCC
DKIW
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA