Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78358793

Identifier: 78358793

GI number: 78358793

Start: 3705591

End: 3705995

Strand: Direct

Name: 78358793

Synonym: Dde_3754

Alternate gene names: NA

Gene position: 3705591-3705995 (Clockwise)

Preceding gene: 78358791

Following gene: 78358794

Centisome position: 99.34

GC content: 58.27

Gene sequence:

>405_bases
ATGGCTCACAGGCTTCTGTTATACGCCGCCGCGGCGCTGGCGGTGTTGCTCATCGCCGCGGCCCCGCTGCTGGCTTATGA
TGTTCCCGACAAAATCGTCATTGAACGGCCTGCCAATTATGAAAAGCTGAATTCGTGGGTCACCAAGGTCAACTTTACCC
ACGGGGCGCACGCCATCAGAGTTTCCTGCAACCAGTGTCACCACAAGGAATCAGACAAGACTCTGGGCAAATTTGTGCCC
TGCACCCAATGCCATAAAAGCGATGACCCCACAGACGAGTCCGGTTTTTACCGGGCATGGCACTCCGACGGTCCGCCCAG
CTGTCTGGGCTGTCACACGCTGATGCGCAGCAAAGGCGGCAAAAATCCGGTGGGCTGCACCTCTGCCTGCCACAAGCCCC
GGTAG

Upstream 100 bases:

>100_bases
AGCAGAAAAAAGTTATCCTCCGACTGATATGTATAATTTAACAGCCGGTAACGGAGCGTATGATGGTTGCATCATAGTAA
CCATCTTCCACGGAGGAACC

Downstream 100 bases:

>100_bases
CCACAGGAGGATATCATGCCCAACGGTAACAGATTTGATGCACTGAAAATGACCGTAGGAACCAGAGAGGTCAGCCGCCG
TGATTTTATGAAGTTCTGCG

Product: cytochrome c3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MAHRLLLYAAAALAVLLIAAAPLLAYDVPDKIVIERPANYEKLNSWVTKVNFTHGAHAIRVSCNQCHHKESDKTLGKFVP
CTQCHKSDDPTDESGFYRAWHSDGPPSCLGCHTLMRSKGGKNPVGCTSACHKPR

Sequences:

>Translated_134_residues
MAHRLLLYAAAALAVLLIAAAPLLAYDVPDKIVIERPANYEKLNSWVTKVNFTHGAHAIRVSCNQCHHKESDKTLGKFVP
CTQCHKSDDPTDESGFYRAWHSDGPPSCLGCHTLMRSKGGKNPVGCTSACHKPR
>Mature_133_residues
AHRLLLYAAAALAVLLIAAAPLLAYDVPDKIVIERPANYEKLNSWVTKVNFTHGAHAIRVSCNQCHHKESDKTLGKFVPC
TQCHKSDDPTDESGFYRAWHSDGPPSCLGCHTLMRSKGGKNPVGCTSACHKPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14666; Mature: 14535

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
6.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHRLLLYAAAALAVLLIAAAPLLAYDVPDKIVIERPANYEKLNSWVTKVNFTHGAHAIR
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCEEEE
VSCNQCHHKESDKTLGKFVPCTQCHKSDDPTDESGFYRAWHSDGPPSCLGCHTLMRSKGG
EEHHHHCCCCCHHHHHHCCCCHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCC
KNPVGCTSACHKPR
CCCCCCCCCCCCCC
>Mature Secondary Structure 
AHRLLLYAAAALAVLLIAAAPLLAYDVPDKIVIERPANYEKLNSWVTKVNFTHGAHAIR
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCEEEE
VSCNQCHHKESDKTLGKFVPCTQCHKSDDPTDESGFYRAWHSDGPPSCLGCHTLMRSKGG
EEHHHHCCCCCHHHHHHCCCCHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCC
KNPVGCTSACHKPR
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA