| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358793
Identifier: 78358793
GI number: 78358793
Start: 3705591
End: 3705995
Strand: Direct
Name: 78358793
Synonym: Dde_3754
Alternate gene names: NA
Gene position: 3705591-3705995 (Clockwise)
Preceding gene: 78358791
Following gene: 78358794
Centisome position: 99.34
GC content: 58.27
Gene sequence:
>405_bases ATGGCTCACAGGCTTCTGTTATACGCCGCCGCGGCGCTGGCGGTGTTGCTCATCGCCGCGGCCCCGCTGCTGGCTTATGA TGTTCCCGACAAAATCGTCATTGAACGGCCTGCCAATTATGAAAAGCTGAATTCGTGGGTCACCAAGGTCAACTTTACCC ACGGGGCGCACGCCATCAGAGTTTCCTGCAACCAGTGTCACCACAAGGAATCAGACAAGACTCTGGGCAAATTTGTGCCC TGCACCCAATGCCATAAAAGCGATGACCCCACAGACGAGTCCGGTTTTTACCGGGCATGGCACTCCGACGGTCCGCCCAG CTGTCTGGGCTGTCACACGCTGATGCGCAGCAAAGGCGGCAAAAATCCGGTGGGCTGCACCTCTGCCTGCCACAAGCCCC GGTAG
Upstream 100 bases:
>100_bases AGCAGAAAAAAGTTATCCTCCGACTGATATGTATAATTTAACAGCCGGTAACGGAGCGTATGATGGTTGCATCATAGTAA CCATCTTCCACGGAGGAACC
Downstream 100 bases:
>100_bases CCACAGGAGGATATCATGCCCAACGGTAACAGATTTGATGCACTGAAAATGACCGTAGGAACCAGAGAGGTCAGCCGCCG TGATTTTATGAAGTTCTGCG
Product: cytochrome c3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MAHRLLLYAAAALAVLLIAAAPLLAYDVPDKIVIERPANYEKLNSWVTKVNFTHGAHAIRVSCNQCHHKESDKTLGKFVP CTQCHKSDDPTDESGFYRAWHSDGPPSCLGCHTLMRSKGGKNPVGCTSACHKPR
Sequences:
>Translated_134_residues MAHRLLLYAAAALAVLLIAAAPLLAYDVPDKIVIERPANYEKLNSWVTKVNFTHGAHAIRVSCNQCHHKESDKTLGKFVP CTQCHKSDDPTDESGFYRAWHSDGPPSCLGCHTLMRSKGGKNPVGCTSACHKPR >Mature_133_residues AHRLLLYAAAALAVLLIAAAPLLAYDVPDKIVIERPANYEKLNSWVTKVNFTHGAHAIRVSCNQCHHKESDKTLGKFVPC TQCHKSDDPTDESGFYRAWHSDGPPSCLGCHTLMRSKGGKNPVGCTSACHKPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14666; Mature: 14535
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 6.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHRLLLYAAAALAVLLIAAAPLLAYDVPDKIVIERPANYEKLNSWVTKVNFTHGAHAIR CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCEEEE VSCNQCHHKESDKTLGKFVPCTQCHKSDDPTDESGFYRAWHSDGPPSCLGCHTLMRSKGG EEHHHHCCCCCHHHHHHCCCCHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCC KNPVGCTSACHKPR CCCCCCCCCCCCCC >Mature Secondary Structure AHRLLLYAAAALAVLLIAAAPLLAYDVPDKIVIERPANYEKLNSWVTKVNFTHGAHAIR CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCEEEE VSCNQCHHKESDKTLGKFVPCTQCHKSDDPTDESGFYRAWHSDGPPSCLGCHTLMRSKGG EEHHHHCCCCCHHHHHHCCCCHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCC KNPVGCTSACHKPR CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA