Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

Click here to switch to the map view.

The map label for this gene is yihX [C]

Identifier: 78358255

GI number: 78358255

Start: 3205423

End: 3206073

Strand: Direct

Name: yihX [C]

Synonym: Dde_3215

Alternate gene names: 78358255

Gene position: 3205423-3206073 (Clockwise)

Preceding gene: 78358251

Following gene: 78358256

Centisome position: 85.93

GC content: 58.99

Gene sequence:

>651_bases
ATGTGCGCAGACCATACCACCCGCCACGGCCTTGATGTTGTATTTTTCGACTTCGGGGGCGTCATTGCCGAAGAGGGTTT
CGTCAACGGCCTGCATGCGCTGGAAAACCGTTTCGGAATAGCCTCCGGAGAGCTGCTCGCCCATGCCACGGACATCTGCT
ACAACGGCGGCTACGTCAACGGCAAGATGACAGAGGCCGGATTCTGGCACGAACTGCGCCGCCGCACCGGAATTGAAGCA
CCGGACGAAGAGCTGCGCGAGGCCATACTCTCGCGGTTTCTCATCCGCCTGTACATGCTTGATGCCGTCAACGCAGTGCG
CTGCGCGGGCATACGCGCCGTCATCGCCAGCGACCAGACAAACTGGCTGGAAGAACTGGACGCCGCACACCGCATCTACG
CACAGTTCGATCTGGTATTCAATTCATACCGTGTGGGCATGAACAAGCGCAGCACAGATTTTTTCGACTTCATCTGCCAG
CGCACCGGTGTACGGCCGGACCGCGCGCTCTTTATCGACGACAACGCAGGACACATCGGCAGAGCGGCATCACGCGGGCT
CAACACCCTGCTGTACACCAGCTACGAGGCGTTTTACAAAGGCCTTACCGCACATATACCGGAACTGCGGCTGGAAGCCT
GCGCACGATAA

Upstream 100 bases:

>100_bases
GCACGAACTGATACCGATGCGTATGCGTTCAGTCATGTTGCGCTTTTCCTGCTATGGGTTATACTGGGGCAAAACCACCA
GCAAGCGGAGATCATGCACC

Downstream 100 bases:

>100_bases
CGCATTGCCTTTTGCCGCGTTTTGACATACCGATTGCTACCGTTCAACCTCACACAGCTGTGCCGGAGACAGGTTCCGGC
AGGAACATCATCATGCAGAA

Product: HAD superfamily hydrolase

Products: NA

Alternate protein names: HAD Superfamily Hydrolase; Haloacid Dehalogenase Domain Protein Hydrolase; Hydrolase

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MCADHTTRHGLDVVFFDFGGVIAEEGFVNGLHALENRFGIASGELLAHATDICYNGGYVNGKMTEAGFWHELRRRTGIEA
PDEELREAILSRFLIRLYMLDAVNAVRCAGIRAVIASDQTNWLEELDAAHRIYAQFDLVFNSYRVGMNKRSTDFFDFICQ
RTGVRPDRALFIDDNAGHIGRAASRGLNTLLYTSYEAFYKGLTAHIPELRLEACAR

Sequences:

>Translated_216_residues
MCADHTTRHGLDVVFFDFGGVIAEEGFVNGLHALENRFGIASGELLAHATDICYNGGYVNGKMTEAGFWHELRRRTGIEA
PDEELREAILSRFLIRLYMLDAVNAVRCAGIRAVIASDQTNWLEELDAAHRIYAQFDLVFNSYRVGMNKRSTDFFDFICQ
RTGVRPDRALFIDDNAGHIGRAASRGLNTLLYTSYEAFYKGLTAHIPELRLEACAR
>Mature_216_residues
MCADHTTRHGLDVVFFDFGGVIAEEGFVNGLHALENRFGIASGELLAHATDICYNGGYVNGKMTEAGFWHELRRRTGIEA
PDEELREAILSRFLIRLYMLDAVNAVRCAGIRAVIASDQTNWLEELDAAHRIYAQFDLVFNSYRVGMNKRSTDFFDFICQ
RTGVRPDRALFIDDNAGHIGRAASRGLNTLLYTSYEAFYKGLTAHIPELRLEACAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24288; Mature: 24288

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCADHTTRHGLDVVFFDFGGVIAEEGFVNGLHALENRFGIASGELLAHATDICYNGGYVN
CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC
GKMTEAGFWHELRRRTGIEAPDEELREAILSRFLIRLYMLDAVNAVRCAGIRAVIASDQT
CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCH
NWLEELDAAHRIYAQFDLVFNSYRVGMNKRSTDFFDFICQRTGVRPDRALFIDDNAGHIG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHH
RAASRGLNTLLYTSYEAFYKGLTAHIPELRLEACAR
HHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCC
>Mature Secondary Structure
MCADHTTRHGLDVVFFDFGGVIAEEGFVNGLHALENRFGIASGELLAHATDICYNGGYVN
CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC
GKMTEAGFWHELRRRTGIEAPDEELREAILSRFLIRLYMLDAVNAVRCAGIRAVIASDQT
CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCH
NWLEELDAAHRIYAQFDLVFNSYRVGMNKRSTDFFDFICQRTGVRPDRALFIDDNAGHIG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHH
RAASRGLNTLLYTSYEAFYKGLTAHIPELRLEACAR
HHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA