| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is yihX [C]
Identifier: 78358255
GI number: 78358255
Start: 3205423
End: 3206073
Strand: Direct
Name: yihX [C]
Synonym: Dde_3215
Alternate gene names: 78358255
Gene position: 3205423-3206073 (Clockwise)
Preceding gene: 78358251
Following gene: 78358256
Centisome position: 85.93
GC content: 58.99
Gene sequence:
>651_bases ATGTGCGCAGACCATACCACCCGCCACGGCCTTGATGTTGTATTTTTCGACTTCGGGGGCGTCATTGCCGAAGAGGGTTT CGTCAACGGCCTGCATGCGCTGGAAAACCGTTTCGGAATAGCCTCCGGAGAGCTGCTCGCCCATGCCACGGACATCTGCT ACAACGGCGGCTACGTCAACGGCAAGATGACAGAGGCCGGATTCTGGCACGAACTGCGCCGCCGCACCGGAATTGAAGCA CCGGACGAAGAGCTGCGCGAGGCCATACTCTCGCGGTTTCTCATCCGCCTGTACATGCTTGATGCCGTCAACGCAGTGCG CTGCGCGGGCATACGCGCCGTCATCGCCAGCGACCAGACAAACTGGCTGGAAGAACTGGACGCCGCACACCGCATCTACG CACAGTTCGATCTGGTATTCAATTCATACCGTGTGGGCATGAACAAGCGCAGCACAGATTTTTTCGACTTCATCTGCCAG CGCACCGGTGTACGGCCGGACCGCGCGCTCTTTATCGACGACAACGCAGGACACATCGGCAGAGCGGCATCACGCGGGCT CAACACCCTGCTGTACACCAGCTACGAGGCGTTTTACAAAGGCCTTACCGCACATATACCGGAACTGCGGCTGGAAGCCT GCGCACGATAA
Upstream 100 bases:
>100_bases GCACGAACTGATACCGATGCGTATGCGTTCAGTCATGTTGCGCTTTTCCTGCTATGGGTTATACTGGGGCAAAACCACCA GCAAGCGGAGATCATGCACC
Downstream 100 bases:
>100_bases CGCATTGCCTTTTGCCGCGTTTTGACATACCGATTGCTACCGTTCAACCTCACACAGCTGTGCCGGAGACAGGTTCCGGC AGGAACATCATCATGCAGAA
Product: HAD superfamily hydrolase
Products: NA
Alternate protein names: HAD Superfamily Hydrolase; Haloacid Dehalogenase Domain Protein Hydrolase; Hydrolase
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MCADHTTRHGLDVVFFDFGGVIAEEGFVNGLHALENRFGIASGELLAHATDICYNGGYVNGKMTEAGFWHELRRRTGIEA PDEELREAILSRFLIRLYMLDAVNAVRCAGIRAVIASDQTNWLEELDAAHRIYAQFDLVFNSYRVGMNKRSTDFFDFICQ RTGVRPDRALFIDDNAGHIGRAASRGLNTLLYTSYEAFYKGLTAHIPELRLEACAR
Sequences:
>Translated_216_residues MCADHTTRHGLDVVFFDFGGVIAEEGFVNGLHALENRFGIASGELLAHATDICYNGGYVNGKMTEAGFWHELRRRTGIEA PDEELREAILSRFLIRLYMLDAVNAVRCAGIRAVIASDQTNWLEELDAAHRIYAQFDLVFNSYRVGMNKRSTDFFDFICQ RTGVRPDRALFIDDNAGHIGRAASRGLNTLLYTSYEAFYKGLTAHIPELRLEACAR >Mature_216_residues MCADHTTRHGLDVVFFDFGGVIAEEGFVNGLHALENRFGIASGELLAHATDICYNGGYVNGKMTEAGFWHELRRRTGIEA PDEELREAILSRFLIRLYMLDAVNAVRCAGIRAVIASDQTNWLEELDAAHRIYAQFDLVFNSYRVGMNKRSTDFFDFICQ RTGVRPDRALFIDDNAGHIGRAASRGLNTLLYTSYEAFYKGLTAHIPELRLEACAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24288; Mature: 24288
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCADHTTRHGLDVVFFDFGGVIAEEGFVNGLHALENRFGIASGELLAHATDICYNGGYVN CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC GKMTEAGFWHELRRRTGIEAPDEELREAILSRFLIRLYMLDAVNAVRCAGIRAVIASDQT CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCH NWLEELDAAHRIYAQFDLVFNSYRVGMNKRSTDFFDFICQRTGVRPDRALFIDDNAGHIG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHH RAASRGLNTLLYTSYEAFYKGLTAHIPELRLEACAR HHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCC >Mature Secondary Structure MCADHTTRHGLDVVFFDFGGVIAEEGFVNGLHALENRFGIASGELLAHATDICYNGGYVN CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC GKMTEAGFWHELRRRTGIEAPDEELREAILSRFLIRLYMLDAVNAVRCAGIRAVIASDQT CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCH NWLEELDAAHRIYAQFDLVFNSYRVGMNKRSTDFFDFICQRTGVRPDRALFIDDNAGHIG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHH RAASRGLNTLLYTSYEAFYKGLTAHIPELRLEACAR HHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA