| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358066
Identifier: 78358066
GI number: 78358066
Start: 3012736
End: 3013578
Strand: Direct
Name: 78358066
Synonym: Dde_3026
Alternate gene names: NA
Gene position: 3012736-3013578 (Clockwise)
Preceding gene: 78358062
Following gene: 78358067
Centisome position: 80.77
GC content: 54.8
Gene sequence:
>843_bases ATGCAACATACCCAATCAGATACAAACAAGCGCTCCGCAGTCGATTTTCTTGTGCTTCCGGCCATCATGGCGGTTCTGAC AGCCGAACATTTCAGCATGTACCTTTCCGGCTACATGCTGCACCTGCTGCCGCAGGCCCTTATTGCCCTGACCATAGGGT ATGCGTGGCGGCGTCCTGCCACAAGCGTTGCCCGGCTGTTTGCCGTGGTCATCGGCTCCATGCTTGCGGTGGCGGCGCTG GAAGTGACATTCAATCTCTACAAGCGTGTTCCCTTTGATGAACGAGGCCCGCTGACAGCCACTTCCATCATGCTGCTGGC GGCATGCGGCATAACCGCAGCAAAAATCTACAGACGGCGCATGGCGGGAGAACGGTTCAGCATTACGTCGGACAAGCTTA TCTGGCTGCTTATGGCCGTGGGGTTTGCCTTTCTGACCGTGGACGAAAAAACACTCATCCATGAGGGCGTGGACAGAATG ATCTACCGCGGCTCCGGCATGCAGCATTCAGCGTTCACCGAGCGGATAGATGACTTCATTGTACTGGGCTATGCCTTTAT CGGCATGTTTTCACTGTACTGGTACCGCCGCGAAATTCTGCGCTTCAAAAAAACCATAACGGTGCTGGCAGCAGGCTTTG TGGTCATGGTCATTCACAGCGGGCTGGACATGGCCGGCAGACCGGACTTTGTCATCAATGTGCTGCACATCACCGAAAAC GCCACACAGATTGCGCACGGCATAGACATGGCTGAAGAGATTCTTAAACTTACGGCAGAGACCTGTTTTCTTTCCGGCCT CATGCTGGCGCTGAAAGACTGTACCACCGCGGCCCGCAAGTAA
Upstream 100 bases:
>100_bases TTGCCCCGCGGGCGGTCAGTCAGCGGTATATCTTTTTTTATTTTTGTAACCCCATTGACACACAAGTGCGCCAGCCAATA CATGTGGCATCAAAAAAGCT
Downstream 100 bases:
>100_bases ACTGCGGCGCCGCCCGCAAAGCGCACACGCCCCGGCTCATGCCGGGGCTTTTTTTTGCCCATCAAGGACAAAGGACGGTG TCGGACGCACAGCAGCCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MQHTQSDTNKRSAVDFLVLPAIMAVLTAEHFSMYLSGYMLHLLPQALIALTIGYAWRRPATSVARLFAVVIGSMLAVAAL EVTFNLYKRVPFDERGPLTATSIMLLAACGITAAKIYRRRMAGERFSITSDKLIWLLMAVGFAFLTVDEKTLIHEGVDRM IYRGSGMQHSAFTERIDDFIVLGYAFIGMFSLYWYRREILRFKKTITVLAAGFVVMVIHSGLDMAGRPDFVINVLHITEN ATQIAHGIDMAEEILKLTAETCFLSGLMLALKDCTTAARK
Sequences:
>Translated_280_residues MQHTQSDTNKRSAVDFLVLPAIMAVLTAEHFSMYLSGYMLHLLPQALIALTIGYAWRRPATSVARLFAVVIGSMLAVAAL EVTFNLYKRVPFDERGPLTATSIMLLAACGITAAKIYRRRMAGERFSITSDKLIWLLMAVGFAFLTVDEKTLIHEGVDRM IYRGSGMQHSAFTERIDDFIVLGYAFIGMFSLYWYRREILRFKKTITVLAAGFVVMVIHSGLDMAGRPDFVINVLHITEN ATQIAHGIDMAEEILKLTAETCFLSGLMLALKDCTTAARK >Mature_280_residues MQHTQSDTNKRSAVDFLVLPAIMAVLTAEHFSMYLSGYMLHLLPQALIALTIGYAWRRPATSVARLFAVVIGSMLAVAAL EVTFNLYKRVPFDERGPLTATSIMLLAACGITAAKIYRRRMAGERFSITSDKLIWLLMAVGFAFLTVDEKTLIHEGVDRM IYRGSGMQHSAFTERIDDFIVLGYAFIGMFSLYWYRREILRFKKTITVLAAGFVVMVIHSGLDMAGRPDFVINVLHITEN ATQIAHGIDMAEEILKLTAETCFLSGLMLALKDCTTAARK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31243; Mature: 31243
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHTQSDTNKRSAVDFLVLPAIMAVLTAEHFSMYLSGYMLHLLPQALIALTIGYAWRRPA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH TSVARLFAVVIGSMLAVAALEVTFNLYKRVPFDERGPLTATSIMLLAACGITAAKIYRRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH MAGERFSITSDKLIWLLMAVGFAFLTVDEKTLIHEGVDRMIYRGSGMQHSAFTERIDDFI HCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH VLGYAFIGMFSLYWYRREILRFKKTITVLAAGFVVMVIHSGLDMAGRPDFVINVLHITEN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCH ATQIAHGIDMAEEILKLTAETCFLSGLMLALKDCTTAARK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQHTQSDTNKRSAVDFLVLPAIMAVLTAEHFSMYLSGYMLHLLPQALIALTIGYAWRRPA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH TSVARLFAVVIGSMLAVAALEVTFNLYKRVPFDERGPLTATSIMLLAACGITAAKIYRRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH MAGERFSITSDKLIWLLMAVGFAFLTVDEKTLIHEGVDRMIYRGSGMQHSAFTERIDDFI HCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH VLGYAFIGMFSLYWYRREILRFKKTITVLAAGFVVMVIHSGLDMAGRPDFVINVLHITEN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCH ATQIAHGIDMAEEILKLTAETCFLSGLMLALKDCTTAARK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA