Click here to switch to the map view.

The map label for this gene is fnr [C]

Identifier: 78358067

GI number: 78358067

Start: 3013744

End: 3014394

Strand: Direct

Name: fnr [C]

Synonym: Dde_3027

Alternate gene names: 78358067

Gene position: 3013744-3014394 (Clockwise)

Preceding gene: 78358066

Following gene: 78358068

Centisome position: 80.79

GC content: 54.69

Gene sequence:

>651_bases
ATGAAATTTTCAGAAATCAATCTGCTTGATGAACTGCAGCGGCCGGAACTGACTGAGCTGCGCGGAATATTCACCCGGCG
GAGCGTCACCAAAGGTGCGGTGGCCTTCCACCCCGAAACAGATGAAAATCTTGTTTTCGTTATCGCCAGCGGCAGAGTGC
GCATTTATCTGGGGTACGAAGAAAAAGAATTCACACTGGGGGTGCTCGAACCGGGTGACCTGTATTCAACGCACGCCGGA
TGTTACGCGCAGGCGCTGGAAGACTCGACCCTGATGGTGACCGATGTGCAGTCCGTCAAACGCTGCATGAGCGAAATCCC
TCTATTCACACGCACCATGGTGCGCGTGCTCGGCCAGATACTGAACAATTCATTTTCAATCATCGGCAGCCTTGCCTTCA
AGGACATCTATACCCGCCTCACGTCGTTTCTGCACAAAGAAGCCCTGCGCACCGGCACCCCGTGTTCCGAAGGCACAGAA
CTGCGCCTTGCCCTGACCACGGAACAACTTTCTCTGCATATGGGGGCCACCCGCCAGACAGTATCCACCCTGCTCAACAA
TCTGGTGCGCGAAGGCATCATGGTCAAAAAAGGGCGTTCCATCTGGGTTATTCCCGATATGGAAGCCCTGCACCGGCAGA
CACAGCAGTAA

Upstream 100 bases:

>100_bases
GGACAAAGGACGGTGTCGGACGCACAGCAGCCACGCTTGCGCGCGGTTCGCAACGCATGCTACCCCGTTATATTGTTATA
ACGAAACTGCGGGGGGAACC

Downstream 100 bases:

>100_bases
CAGTTCTTTGTTTCTTTTCTGCACGGGGTGTCAGCCAGCCGACAAACTTTTTTCCGCCCGTATGCCATCATAAGCACCGG
CCTCAGACACACACAACGCA

Product: Crp/FNR family transcriptional regulator

Products: NA

Alternate protein names: Crp/FNR Family Transcriptional Regulator; Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Carbon Monoxide Dehydrogenase CooA Protein; Crp/Fnr Family Transcriptional Regulator

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MKFSEINLLDELQRPELTELRGIFTRRSVTKGAVAFHPETDENLVFVIASGRVRIYLGYEEKEFTLGVLEPGDLYSTHAG
CYAQALEDSTLMVTDVQSVKRCMSEIPLFTRTMVRVLGQILNNSFSIIGSLAFKDIYTRLTSFLHKEALRTGTPCSEGTE
LRLALTTEQLSLHMGATRQTVSTLLNNLVREGIMVKKGRSIWVIPDMEALHRQTQQ

Sequences:

>Translated_216_residues
MKFSEINLLDELQRPELTELRGIFTRRSVTKGAVAFHPETDENLVFVIASGRVRIYLGYEEKEFTLGVLEPGDLYSTHAG
CYAQALEDSTLMVTDVQSVKRCMSEIPLFTRTMVRVLGQILNNSFSIIGSLAFKDIYTRLTSFLHKEALRTGTPCSEGTE
LRLALTTEQLSLHMGATRQTVSTLLNNLVREGIMVKKGRSIWVIPDMEALHRQTQQ
>Mature_216_residues
MKFSEINLLDELQRPELTELRGIFTRRSVTKGAVAFHPETDENLVFVIASGRVRIYLGYEEKEFTLGVLEPGDLYSTHAG
CYAQALEDSTLMVTDVQSVKRCMSEIPLFTRTMVRVLGQILNNSFSIIGSLAFKDIYTRLTSFLHKEALRTGTPCSEGTE
LRLALTTEQLSLHMGATRQTVSTLLNNLVREGIMVKKGRSIWVIPDMEALHRQTQQ

Specific function: Global Transcription Factor That Controls The Expression Of Over 100 Target Genes In Response To Anoxia. It Facilitates The Adaptation To Anaerobic Growth Conditions By Regulating The Expression Of Gene Products That Are Involved In Anaerobic Energy Metab

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24357; Mature: 24357

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFSEINLLDELQRPELTELRGIFTRRSVTKGAVAFHPETDENLVFVIASGRVRIYLGYE
CCCCHHCHHHHHCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEECCCEEEEECCC
EKEFTLGVLEPGDLYSTHAGCYAQALEDSTLMVTDVQSVKRCMSEIPLFTRTMVRVLGQI
CCCEEEEEECCCCCCCCCHHHHHHHHCCCEEEEECHHHHHHHHHHCCHHHHHHHHHHHHH
LNNSFSIIGSLAFKDIYTRLTSFLHKEALRTGTPCSEGTELRLALTTEQLSLHMGATRQT
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHCCCHHHH
VSTLLNNLVREGIMVKKGRSIWVIPDMEALHRQTQQ
HHHHHHHHHHCCEEEECCCEEEEECCHHHHHHHCCC
>Mature Secondary Structure
MKFSEINLLDELQRPELTELRGIFTRRSVTKGAVAFHPETDENLVFVIASGRVRIYLGYE
CCCCHHCHHHHHCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEECCCEEEEECCC
EKEFTLGVLEPGDLYSTHAGCYAQALEDSTLMVTDVQSVKRCMSEIPLFTRTMVRVLGQI
CCCEEEEEECCCCCCCCCHHHHHHHHCCCEEEEECHHHHHHHHHHCCHHHHHHHHHHHHH
LNNSFSIIGSLAFKDIYTRLTSFLHKEALRTGTPCSEGTELRLALTTEQLSLHMGATRQT
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHCCCHHHH
VSTLLNNLVREGIMVKKGRSIWVIPDMEALHRQTQQ
HHHHHHHHHHCCEEEECCCEEEEECCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA