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The map label for this gene is nodV [H]

Identifier: 78357991

GI number: 78357991

Start: 2930891

End: 2932747

Strand: Direct

Name: nodV [H]

Synonym: Dde_2951

Alternate gene names: 78357991

Gene position: 2930891-2932747 (Clockwise)

Preceding gene: 78357990

Following gene: 78357992

Centisome position: 78.57

GC content: 59.02

Gene sequence:

>1857_bases
ATGCACACAGAAAATCAATCCACTGCGTGTTCCGTCCGCTTTGAAGTGCCGGAACCAACGGCAACCCTGCTGTCGCTGCT
TGCGGATGATGCCGCAAAAGGCAGCGGACTGGCCTATGCACGGTCTGTGCTCGGACCGCTCACAGGATGGGATATACGGC
AGCTGCCTGCCGCACTGCATGCCGCACTGGCAGAAGCGGATGCGCTCGCACCGTTGCAGGTGTGGCTGCGCTCGGACCGC
ACGCAGCCTTTTGCGTGCATGTTCAGCCACGGCGGTGCAACCTTCCGCCTGAATGTTCACTGCCGCAGCATAACAGCGGG
AGAAAAAGCCCTGCAGACTGCGGTTGCAACCTGCGAACCGGCCGAAAACCGTCTGCCGCAGACCGACACACCCGGAACCA
TACCGCCTCTGCTTGACCGCTTTCCGGCCTTTGTCGCACTTATCGGACAGGATTACACCGTCCGTTACGCCAACCGCACC
TTCCGCGAAATGTTCGGCGACGACGCATACGGTCCCTGCTACCGGTGCATTCACGGCCGCCAAAGCCCCTGCGACGTATG
CGCGCCGTTCGATGTATTTGAAACAGATTCCCTGACCATATCGGAGTGGGAGCACCAGCCCACGGGCAAGGCATTCAGAA
CTTTCGCCTATCCTTTTGCACTGGATGACGGCAGCACATGCGTGCTTGTCATAGGGCTTGATATCTCGCAAAGCCTCAAG
GCGCAGAAGGCGCTTATCCACAGCGAACAGCGCTACAGAGCCATAACCGACAACCTTGCCACCGGCATAGCCGTTGTGGA
TGCCAACGGATGCATTCAGGCGGTGAACCCCAAAATCACCGAATGGTTCGGCAGCACCATTTCCGGCGGTGTGTTTGTGG
ATGATCTCTTCAGCCTTATACGCAGCGCGGCACCGCCGGTGCCGCAGCAAAGCCCTCCCGCCGGCACCGGCGCCGCACAG
TCGCTGCTGCTTGCCATTCTTTCCGGAGCAACATGGGAAACGGAACTGCCCCTGAAAAGTCTTTCCGGTGAACGCACATT
CCGCATTGTGGTCTGCCCTGTGCTGGATTCTGAAGACATGGCGGGAACATCCGTACTTATGCTGGATGACGTGACCGAAA
GGCGTCAGGCGGAACAGAGCCTGCAGCGCACACGCAAGCTTGAGGCCATGGGAACACTGGCCGGCGGCATAGCCCACGAA
ATCAACCAGCCGCTCAACGCGTTGCAGCTGTATGCCAGCGGGCTGGAGATGATGCTTGAAAAACACGGTTCCATTGAACC
GGACGTGCTGTACAAACGTCTTTCGTGGATTCTGCGCGAGGCAGGCAAAATACGTGAAATAATCGCCCACATGCGCGCCG
TGGTCATGCAGGAGGAAACCCCGCACTGCGGTCCGGTGATGGTGGAAGAAGCCGTGCGCAGCGCGCTGGGGCTGGTAGGC
GCGCAACTGCAGTCACACGGCATCACCCTGCAGCTGGATTTCGGCAATGCCGTACAGCTGGAACAGGTGGTCATCAATCT
GGTGGTCAACGCCATGCACGCGCTGGACTCTGTTGACATTGCAGAAAAAACCATCACCATACACACCGCTGCCGCTCCCA
AAGGGATGGCCATGCTGGTGGTGGAAGACAACGGCCCCGGTCTGAACGGACTGCAGGAACGTATTTTCGACCCTTTTTTC
ACCACCAAGGAAACCGGCAGCGGCATGGGGCTGGGGCTTTCCATTGTACATGCTTTCATAGAAACGTGGGGCGGGTCGGT
GCACGCCGGCGACAGACCGCCGCCGGAGCGGGGAGCCCGCTTTGTCATACTGCTGCAACCCGCCGGAGACTGTCATGCGC
ATAATGATAATAGATGA

Upstream 100 bases:

>100_bases
CATCCGCCTGCCGCTTTTCCCCGGTGCCCCCTCCGGACAGGATGCCCGGCCCTCCTCCGCCCTTTGACCTGCCCTGCGAA
AAACCGCATAGTGCCGCTGA

Downstream 100 bases:

>100_bases
CAACACCAACAGTCTGCAAAGCCTCAGTGTGGTGCTGAGCGATCTGGGGCACGACCCAGACGCGTTCAGCAGCCCCGTTG
ATGCGCTGCGGCAGGCCCGT

Product: PAS/PAC sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 618; Mature: 618

Protein sequence:

>618_residues
MHTENQSTACSVRFEVPEPTATLLSLLADDAAKGSGLAYARSVLGPLTGWDIRQLPAALHAALAEADALAPLQVWLRSDR
TQPFACMFSHGGATFRLNVHCRSITAGEKALQTAVATCEPAENRLPQTDTPGTIPPLLDRFPAFVALIGQDYTVRYANRT
FREMFGDDAYGPCYRCIHGRQSPCDVCAPFDVFETDSLTISEWEHQPTGKAFRTFAYPFALDDGSTCVLVIGLDISQSLK
AQKALIHSEQRYRAITDNLATGIAVVDANGCIQAVNPKITEWFGSTISGGVFVDDLFSLIRSAAPPVPQQSPPAGTGAAQ
SLLLAILSGATWETELPLKSLSGERTFRIVVCPVLDSEDMAGTSVLMLDDVTERRQAEQSLQRTRKLEAMGTLAGGIAHE
INQPLNALQLYASGLEMMLEKHGSIEPDVLYKRLSWILREAGKIREIIAHMRAVVMQEETPHCGPVMVEEAVRSALGLVG
AQLQSHGITLQLDFGNAVQLEQVVINLVVNAMHALDSVDIAEKTITIHTAAAPKGMAMLVVEDNGPGLNGLQERIFDPFF
TTKETGSGMGLGLSIVHAFIETWGGSVHAGDRPPPERGARFVILLQPAGDCHAHNDNR

Sequences:

>Translated_618_residues
MHTENQSTACSVRFEVPEPTATLLSLLADDAAKGSGLAYARSVLGPLTGWDIRQLPAALHAALAEADALAPLQVWLRSDR
TQPFACMFSHGGATFRLNVHCRSITAGEKALQTAVATCEPAENRLPQTDTPGTIPPLLDRFPAFVALIGQDYTVRYANRT
FREMFGDDAYGPCYRCIHGRQSPCDVCAPFDVFETDSLTISEWEHQPTGKAFRTFAYPFALDDGSTCVLVIGLDISQSLK
AQKALIHSEQRYRAITDNLATGIAVVDANGCIQAVNPKITEWFGSTISGGVFVDDLFSLIRSAAPPVPQQSPPAGTGAAQ
SLLLAILSGATWETELPLKSLSGERTFRIVVCPVLDSEDMAGTSVLMLDDVTERRQAEQSLQRTRKLEAMGTLAGGIAHE
INQPLNALQLYASGLEMMLEKHGSIEPDVLYKRLSWILREAGKIREIIAHMRAVVMQEETPHCGPVMVEEAVRSALGLVG
AQLQSHGITLQLDFGNAVQLEQVVINLVVNAMHALDSVDIAEKTITIHTAAAPKGMAMLVVEDNGPGLNGLQERIFDPFF
TTKETGSGMGLGLSIVHAFIETWGGSVHAGDRPPPERGARFVILLQPAGDCHAHNDNR
>Mature_618_residues
MHTENQSTACSVRFEVPEPTATLLSLLADDAAKGSGLAYARSVLGPLTGWDIRQLPAALHAALAEADALAPLQVWLRSDR
TQPFACMFSHGGATFRLNVHCRSITAGEKALQTAVATCEPAENRLPQTDTPGTIPPLLDRFPAFVALIGQDYTVRYANRT
FREMFGDDAYGPCYRCIHGRQSPCDVCAPFDVFETDSLTISEWEHQPTGKAFRTFAYPFALDDGSTCVLVIGLDISQSLK
AQKALIHSEQRYRAITDNLATGIAVVDANGCIQAVNPKITEWFGSTISGGVFVDDLFSLIRSAAPPVPQQSPPAGTGAAQ
SLLLAILSGATWETELPLKSLSGERTFRIVVCPVLDSEDMAGTSVLMLDDVTERRQAEQSLQRTRKLEAMGTLAGGIAHE
INQPLNALQLYASGLEMMLEKHGSIEPDVLYKRLSWILREAGKIREIIAHMRAVVMQEETPHCGPVMVEEAVRSALGLVG
AQLQSHGITLQLDFGNAVQLEQVVINLVVNAMHALDSVDIAEKTITIHTAAAPKGMAMLVVEDNGPGLNGLQERIFDPFF
TTKETGSGMGLGLSIVHAFIETWGGSVHAGDRPPPERGARFVILLQPAGDCHAHNDNR

Specific function: Member of the two-component regulatory system nodV/nodW probably involved in the regulation of the transcription of genes involved in the nodulation process. NodV may function as a membrane-associated protein kinase that phosphorylates nodW in response to

COG id: COG4191

COG function: function code T; Signal transduction histidine kinase regulating C4-dicarboxylate transport system

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=397, Percent_Identity=25.1889168765743, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1790436, Length=243, Percent_Identity=26.3374485596708, Blast_Score=74, Evalue=4e-14,
Organism=Escherichia coli, GI1790300, Length=355, Percent_Identity=25.0704225352113, Blast_Score=63, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 66763; Mature: 66763

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN ; PS00189 LIPOYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTENQSTACSVRFEVPEPTATLLSLLADDAAKGSGLAYARSVLGPLTGWDIRQLPAALH
CCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHH
AALAEADALAPLQVWLRSDRTQPFACMFSHGGATFRLNVHCRSITAGEKALQTAVATCEP
HHHHHHHCCHHHHHHHHCCCCCCEEEEEECCCEEEEEEEEEECCCCHHHHHHHHHHHCCC
AENRLPQTDTPGTIPPLLDRFPAFVALIGQDYTVRYANRTFREMFGDDAYGPCYRCIHGR
HHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCHHHHHHCCC
QSPCDVCAPFDVFETDSLTISEWEHQPTGKAFRTFAYPFALDDGSTCVLVIGLDISQSLK
CCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHEECEEEECCCCEEEEEEECCCHHHHH
AQKALIHSEQRYRAITDNLATGIAVVDANGCIQAVNPKITEWFGSTISGGVFVDDLFSLI
HHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEECCCCHHHHHHCCCCCCCEEHHHHHHHH
RSAAPPVPQQSPPAGTGAAQSLLLAILSGATWETELPLKSLSGERTFRIVVCPVLDSEDM
HHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEEEEEEECCCCC
AGTSVLMLDDVTERRQAEQSLQRTRKLEAMGTLAGGIAHEINQPLNALQLYASGLEMMLE
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
KHGSIEPDVLYKRLSWILREAGKIREIIAHMRAVVMQEETPHCGPVMVEEAVRSALGLVG
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
AQLQSHGITLQLDFGNAVQLEQVVINLVVNAMHALDSVDIAEKTITIHTAAAPKGMAMLV
HHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECCCCCCEEEEE
VEDNGPGLNGLQERIFDPFFTTKETGSGMGLGLSIVHAFIETWGGSVHAGDRPPPERGAR
EECCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCE
FVILLQPAGDCHAHNDNR
EEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MHTENQSTACSVRFEVPEPTATLLSLLADDAAKGSGLAYARSVLGPLTGWDIRQLPAALH
CCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHH
AALAEADALAPLQVWLRSDRTQPFACMFSHGGATFRLNVHCRSITAGEKALQTAVATCEP
HHHHHHHCCHHHHHHHHCCCCCCEEEEEECCCEEEEEEEEEECCCCHHHHHHHHHHHCCC
AENRLPQTDTPGTIPPLLDRFPAFVALIGQDYTVRYANRTFREMFGDDAYGPCYRCIHGR
HHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCHHHHHHCCC
QSPCDVCAPFDVFETDSLTISEWEHQPTGKAFRTFAYPFALDDGSTCVLVIGLDISQSLK
CCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHEECEEEECCCCEEEEEEECCCHHHHH
AQKALIHSEQRYRAITDNLATGIAVVDANGCIQAVNPKITEWFGSTISGGVFVDDLFSLI
HHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEECCCCHHHHHHCCCCCCCEEHHHHHHHH
RSAAPPVPQQSPPAGTGAAQSLLLAILSGATWETELPLKSLSGERTFRIVVCPVLDSEDM
HHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEEEEEEECCCCC
AGTSVLMLDDVTERRQAEQSLQRTRKLEAMGTLAGGIAHEINQPLNALQLYASGLEMMLE
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
KHGSIEPDVLYKRLSWILREAGKIREIIAHMRAVVMQEETPHCGPVMVEEAVRSALGLVG
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
AQLQSHGITLQLDFGNAVQLEQVVINLVVNAMHALDSVDIAEKTITIHTAAAPKGMAMLV
HHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECCCCCCEEEEE
VEDNGPGLNGLQERIFDPFFTTKETGSGMGLGLSIVHAFIETWGGSVHAGDRPPPERGAR
EECCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCE
FVILLQPAGDCHAHNDNR
EEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2320582; 11157954; 12597275 [H]