| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is mltA [H]
Identifier: 78357775
GI number: 78357775
Start: 2736241
End: 2737479
Strand: Reverse
Name: mltA [H]
Synonym: Dde_2733
Alternate gene names: 78357775
Gene position: 2737479-2736241 (Counterclockwise)
Preceding gene: 78357779
Following gene: 78357770
Centisome position: 73.39
GC content: 61.5
Gene sequence:
>1239_bases ATGCGTGTTGGGCGGCCCATGGCGCCGCGGCTGCGGCTGCTGTTGCTGGCTGCTTGCTGTACTGTGTTGCTGGCGGCCGG CGGGTGTGCCGTAACTACGGAACAGGCACCCGTGTTCCGCGAGGTTCCGCAGGACGAGGCGCGCGATCTGACCCGCAGTC TGGACCCGCGGCGGCAGGGACTTGATTCGTGGCTGGCGCTGCGGCCTGCGCTGGAAAGAAGTCTGGAATATGTGCGCCGT CGTCCTGCACAGGATGCGGCGCTGGATAAATACGGACGCAGAGTCACATGGGATCAGCTGCGTTCGTCGCTGGAACTTTT TGTCAGCCTGCTGCCGCAGCTCGACAGCCGTCCGGAACTGCTGGCGCGGCATTTCACTTTTCTGCGGCTGGAACCGGGCC CGCTGTTTACCGGTTATTACGAGCCCTATATTCATGCTTCGCCCGTGCGCAGTGCGGCGTACCCTTTTCCGCTGTACGGC AAGCCGCAGGATCTGAAAACCGTGCGGCTGGAAGCGTTTCACCCGCGGTGGAAAGGGCAGGTGCTGACATACAGGGTGGA AAACGGCGAAGTGGTGCCCTACCATGACCGCGAAACCATAGACAGCGGCGGGGCGTTGGAAGGCAAGGGGCTGGAGATAG CATGGGTGCAGGATCCTGCGGATATATTCTTTCTGCAGGTGCAGGGTTCCGGCAGGCTGATAATGCCCGACGGCACGGAA AAGCATGTGCTGTACGCCGGTAAAAACGGCAGGGAATATGTATCGCTGGGCAGAGTGATGAAAGAGCGCGGTCTGTTGCC TGCGGACGGTATTTCCATGCAGTCCATCAGGGCGTATCTGGCTGCGCATCCCGAAAAAGAGCGCGAACTGTTGAATACCA ATCCGAGCTATGTGTTCTTCCGGCTTTCCGATGACGGGCCTTACGGCAGCATCAATCAGGTGCTTACGCCGTGGGTCAGT CTGGCCACCGACCGTGCGACTCTGCCGCTGGGCAGCGCCATGCTGTTTTCAGTACCCAGACCGCTGCCCGCCACGGTGCA GCAGCACGGAACAGATGGCAGGGCATATGCGGAGCAGCCGTTTACGGGCATAGGTCTGGCTCAGGATACCGGCGGCGCCA TCAAGGAGCACCGGATAGACCTGTTCAGCGGCAGCGGTGAACTGGCGGAATTTGTGGCCGGGCATCTGGCGGCGCGGGGC AGTGTATATCTGCTGCTGCCGCGGCAGACAGCGCCTTAG
Upstream 100 bases:
>100_bases CCGCGGACGGGTGCCGTGTGTTGCCGTGTGCGGCAGCGGCTGTGCAGGCCCGTGCGGGACAAGGTCAGGATGGCATAACG TGAAAGGTATGTTTGTTGAA
Downstream 100 bases:
>100_bases CATGTGCTGAAAGCGACCTGAGGCGCCCGTGTACCCGACGGGCGCTTTTTTTTGCCCTCGTGCATAAAAAGATGAGTCAG ACAGAAGGGCTGCAGGCATG
Product: transglycosylase
Products: Muramic Acid Residue [C]
Alternate protein names: Murein hydrolase A [H]
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MRVGRPMAPRLRLLLLAACCTVLLAAGGCAVTTEQAPVFREVPQDEARDLTRSLDPRRQGLDSWLALRPALERSLEYVRR RPAQDAALDKYGRRVTWDQLRSSLELFVSLLPQLDSRPELLARHFTFLRLEPGPLFTGYYEPYIHASPVRSAAYPFPLYG KPQDLKTVRLEAFHPRWKGQVLTYRVENGEVVPYHDRETIDSGGALEGKGLEIAWVQDPADIFFLQVQGSGRLIMPDGTE KHVLYAGKNGREYVSLGRVMKERGLLPADGISMQSIRAYLAAHPEKERELLNTNPSYVFFRLSDDGPYGSINQVLTPWVS LATDRATLPLGSAMLFSVPRPLPATVQQHGTDGRAYAEQPFTGIGLAQDTGGAIKEHRIDLFSGSGELAEFVAGHLAARG SVYLLLPRQTAP
Sequences:
>Translated_412_residues MRVGRPMAPRLRLLLLAACCTVLLAAGGCAVTTEQAPVFREVPQDEARDLTRSLDPRRQGLDSWLALRPALERSLEYVRR RPAQDAALDKYGRRVTWDQLRSSLELFVSLLPQLDSRPELLARHFTFLRLEPGPLFTGYYEPYIHASPVRSAAYPFPLYG KPQDLKTVRLEAFHPRWKGQVLTYRVENGEVVPYHDRETIDSGGALEGKGLEIAWVQDPADIFFLQVQGSGRLIMPDGTE KHVLYAGKNGREYVSLGRVMKERGLLPADGISMQSIRAYLAAHPEKERELLNTNPSYVFFRLSDDGPYGSINQVLTPWVS LATDRATLPLGSAMLFSVPRPLPATVQQHGTDGRAYAEQPFTGIGLAQDTGGAIKEHRIDLFSGSGELAEFVAGHLAARG SVYLLLPRQTAP >Mature_412_residues MRVGRPMAPRLRLLLLAACCTVLLAAGGCAVTTEQAPVFREVPQDEARDLTRSLDPRRQGLDSWLALRPALERSLEYVRR RPAQDAALDKYGRRVTWDQLRSSLELFVSLLPQLDSRPELLARHFTFLRLEPGPLFTGYYEPYIHASPVRSAAYPFPLYG KPQDLKTVRLEAFHPRWKGQVLTYRVENGEVVPYHDRETIDSGGALEGKGLEIAWVQDPADIFFLQVQGSGRLIMPDGTE KHVLYAGKNGREYVSLGRVMKERGLLPADGISMQSIRAYLAAHPEKERELLNTNPSYVFFRLSDDGPYGSINQVLTPWVS LATDRATLPLGSAMLFSVPRPLPATVQQHGTDGRAYAEQPFTGIGLAQDTGGAIKEHRIDLFSGSGELAEFVAGHLAARG SVYLLLPRQTAP
Specific function: Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. Degrades murein glycan strands and insoluble, high-molecular weight murein sacculi [H]
COG id: COG2821
COG function: function code M; Membrane-bound lytic murein transglycosylase
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789179, Length=280, Percent_Identity=33.5714285714286, Blast_Score=110, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010611 - InterPro: IPR014733 - InterPro: IPR005300 [H]
Pfam domain/function: PF06725 3D; PF03562 MltA [H]
EC number: 3.2.1.- [C]
Molecular weight: Translated: 45785; Mature: 45785
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVGRPMAPRLRLLLLAACCTVLLAAGGCAVTTEQAPVFREVPQDEARDLTRSLDPRRQG CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHCCCHHHHHHHHHCCHHHHH LDSWLALRPALERSLEYVRRRPAQDAALDKYGRRVTWDQLRSSLELFVSLLPQLDSRPEL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHH LARHFTFLRLEPGPLFTGYYEPYIHASPVRSAAYPFPLYGKPQDLKTVRLEAFHPRWKGQ HHHHEEEEEECCCCEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC VLTYRVENGEVVPYHDRETIDSGGALEGKGLEIAWVQDPADIFFLQVQGSGRLIMPDGTE EEEEEECCCCEECCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCEEECCCCCC KHVLYAGKNGREYVSLGRVMKERGLLPADGISMQSIRAYLAAHPEKERELLNTNPSYVFF CEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCEEEE RLSDDGPYGSINQVLTPWVSLATDRATLPLGSAMLFSVPRPLPATVQQHGTDGRAYAEQP EECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHEECCCCCCHHHHHCCCCCCEECCCC FTGIGLAQDTGGAIKEHRIDLFSGSGELAEFVAGHLAARGSVYLLLPRQTAP CCCCCCCCCCCCCHHHHEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCC >Mature Secondary Structure MRVGRPMAPRLRLLLLAACCTVLLAAGGCAVTTEQAPVFREVPQDEARDLTRSLDPRRQG CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHCCCHHHHHHHHHCCHHHHH LDSWLALRPALERSLEYVRRRPAQDAALDKYGRRVTWDQLRSSLELFVSLLPQLDSRPEL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHH LARHFTFLRLEPGPLFTGYYEPYIHASPVRSAAYPFPLYGKPQDLKTVRLEAFHPRWKGQ HHHHEEEEEECCCCEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC VLTYRVENGEVVPYHDRETIDSGGALEGKGLEIAWVQDPADIFFLQVQGSGRLIMPDGTE EEEEEECCCCEECCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCEEECCCCCC KHVLYAGKNGREYVSLGRVMKERGLLPADGISMQSIRAYLAAHPEKERELLNTNPSYVFF CEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCEEEE RLSDDGPYGSINQVLTPWVSLATDRATLPLGSAMLFSVPRPLPATVQQHGTDGRAYAEQP EECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHEECCCCCCHHHHHCCCCCCEECCCC FTGIGLAQDTGGAIKEHRIDLFSGSGELAEFVAGHLAARGSVYLLLPRQTAP CCCCCCCCCCCCCHHHHEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic [C]
General reaction: Cleavage Bond [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]