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The map label for this gene is yfdZ [H]

Identifier: 78357772

GI number: 78357772

Start: 2732520

End: 2733704

Strand: Direct

Name: yfdZ [H]

Synonym: Dde_2730

Alternate gene names: 78357772

Gene position: 2732520-2733704 (Clockwise)

Preceding gene: 78357771

Following gene: 78357773

Centisome position: 73.25

GC content: 56.12

Gene sequence:

>1185_bases
ATGTACGAATTTCCACGCATGCACAGACTGCCCCCCTACGTTTTTGCCGTAGTGGGCGAACTGAAGATGCAGCTACGTCG
TCAGAACGTGGATATCGTGGACATGGGTATGGGAAACCCAGACATGCCCACCCCGCAACATATTGTCGAAAAGCTGAACG
AAGCCGCGGCCAAGGGCGTCAATCACCGTTACTCCGTATCCAGAGGCATACCCAACCTGCGCAAGGCCATCTGCGAATGG
TACATGCGCAAGTTCGATGTTTATCTGGATCCTGACAAAGAAGCCGTGGTGACCATGGGCGCCAAGGAAGGACTTTCCCA
CCTTGCCCTTGCCATGCTTTCGCCCGGCGACGTGGTGTTTGCGCCCGATCCGACGTACCCCATCCACACTTACGCGGCCA
TCATCGCGGGTGCGGACGTGCGTCGTATTCCCATCGGCAAAGGCCGCGACTTTTTTGAAGACCTGCTGGCGGCAACGCGC
CAGACATGGCCCCAGCCCAAGCTGCTGATGCTCAGCTACCCTCACAATCCCACCACCGAACTGGCGACACTCGAATTTTT
CCAGAAGGTTGTGGACTTTGCCAAAGAACACAAGATGTATGTCGTGCACGACATGGCCTATGCCGATCTTGCGTTTGACG
GATACGAGCCGCCCAGCTTTATGCAGGCCGATGGTGCCAAGGACGTGGGTGTTGAATTTTACTCCATGTCCAAAAGCTAT
TCCATGGCCGGATGGCGTGTAGGTTTCTGCGTGGGCAACCGTGAAATGGTGCACGCGCTTACCCGCATCAAATCATATCT
TGATTACGGTATTTTCCAGCCCATCCAGATAGCCGCCACTGTGGCGCTGAACGGGCCGGAAGACTGTGTGAAGGAAATTG
TGGATACATACCGCCAGCGCCGCGACGTGCTGTGCGAAGGGCTGAACCGCGTGGGATGGCCCATTGAACCGCCCAAGGCC
ACCATGTTTGCCTGGGCCGAAATTCCCGAACCTTTCCGTCAGATGGGTTCTGTGGAATTTTCGAAACTGCTGCTGAGAGA
GGCCGGTGTGGCCGTTTCGCCCGGACTCGGCTTCGGGCACTTCGGCGACCACCACGTGCGGTTTGCCCTTATTGAAAATC
CCCATCGCATCAAGCAGGCGATAAAGGGTATAAAACGAGTACTATCAGGGAGCTCCTGTGGCTAG

Upstream 100 bases:

>100_bases
CGGGCGCTGACGCAGCTTTCTTTTTGACAGCGCCATACCCTACCGCATATGGTCACGTCTTATCGTTTTCACCTTTTTAT
TTCGGAGGACGCCGAAGGCC

Downstream 100 bases:

>100_bases
CGACAAACGACTCGTGCTCGGCGTTGCCGGTTTCGGCACCGTGGGCACGGGCCTGACATCCATACTGGAAGAAAACCGCG
ACTGGATCATCCAGCGCACC

Product: aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MYEFPRMHRLPPYVFAVVGELKMQLRRQNVDIVDMGMGNPDMPTPQHIVEKLNEAAAKGVNHRYSVSRGIPNLRKAICEW
YMRKFDVYLDPDKEAVVTMGAKEGLSHLALAMLSPGDVVFAPDPTYPIHTYAAIIAGADVRRIPIGKGRDFFEDLLAATR
QTWPQPKLLMLSYPHNPTTELATLEFFQKVVDFAKEHKMYVVHDMAYADLAFDGYEPPSFMQADGAKDVGVEFYSMSKSY
SMAGWRVGFCVGNREMVHALTRIKSYLDYGIFQPIQIAATVALNGPEDCVKEIVDTYRQRRDVLCEGLNRVGWPIEPPKA
TMFAWAEIPEPFRQMGSVEFSKLLLREAGVAVSPGLGFGHFGDHHVRFALIENPHRIKQAIKGIKRVLSGSSCG

Sequences:

>Translated_394_residues
MYEFPRMHRLPPYVFAVVGELKMQLRRQNVDIVDMGMGNPDMPTPQHIVEKLNEAAAKGVNHRYSVSRGIPNLRKAICEW
YMRKFDVYLDPDKEAVVTMGAKEGLSHLALAMLSPGDVVFAPDPTYPIHTYAAIIAGADVRRIPIGKGRDFFEDLLAATR
QTWPQPKLLMLSYPHNPTTELATLEFFQKVVDFAKEHKMYVVHDMAYADLAFDGYEPPSFMQADGAKDVGVEFYSMSKSY
SMAGWRVGFCVGNREMVHALTRIKSYLDYGIFQPIQIAATVALNGPEDCVKEIVDTYRQRRDVLCEGLNRVGWPIEPPKA
TMFAWAEIPEPFRQMGSVEFSKLLLREAGVAVSPGLGFGHFGDHHVRFALIENPHRIKQAIKGIKRVLSGSSCG
>Mature_394_residues
MYEFPRMHRLPPYVFAVVGELKMQLRRQNVDIVDMGMGNPDMPTPQHIVEKLNEAAAKGVNHRYSVSRGIPNLRKAICEW
YMRKFDVYLDPDKEAVVTMGAKEGLSHLALAMLSPGDVVFAPDPTYPIHTYAAIIAGADVRRIPIGKGRDFFEDLLAATR
QTWPQPKLLMLSYPHNPTTELATLEFFQKVVDFAKEHKMYVVHDMAYADLAFDGYEPPSFMQADGAKDVGVEFYSMSKSY
SMAGWRVGFCVGNREMVHALTRIKSYLDYGIFQPIQIAATVALNGPEDCVKEIVDTYRQRRDVLCEGLNRVGWPIEPPKA
TMFAWAEIPEPFRQMGSVEFSKLLLREAGVAVSPGLGFGHFGDHHVRFALIENPHRIKQAIKGIKRVLSGSSCG

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI95147551, Length=393, Percent_Identity=21.6284987277354, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI169881279, Length=393, Percent_Identity=21.6284987277354, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI56713254, Length=303, Percent_Identity=25.4125412541254, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI56713256, Length=303, Percent_Identity=25.4125412541254, Blast_Score=99, Evalue=7e-21,
Organism=Homo sapiens, GI169881281, Length=369, Percent_Identity=20.8672086720867, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI1788722, Length=382, Percent_Identity=57.8534031413613, Blast_Score=485, Evalue=1e-138,
Organism=Escherichia coli, GI1786816, Length=333, Percent_Identity=27.3273273273273, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1788627, Length=386, Percent_Identity=23.8341968911917, Blast_Score=86, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17567369, Length=392, Percent_Identity=24.234693877551, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI71994476, Length=372, Percent_Identity=25, Blast_Score=105, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI71994472, Length=372, Percent_Identity=25, Blast_Score=105, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI17567663, Length=349, Percent_Identity=22.3495702005731, Blast_Score=69, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6322401, Length=393, Percent_Identity=20.6106870229008, Blast_Score=89, Evalue=1e-18,
Organism=Drosophila melanogaster, GI28573069, Length=413, Percent_Identity=21.5496368038741, Blast_Score=95, Evalue=8e-20,
Organism=Drosophila melanogaster, GI24646114, Length=413, Percent_Identity=21.5496368038741, Blast_Score=95, Evalue=8e-20,
Organism=Drosophila melanogaster, GI28573067, Length=413, Percent_Identity=21.5496368038741, Blast_Score=95, Evalue=8e-20,
Organism=Drosophila melanogaster, GI28573065, Length=413, Percent_Identity=21.5496368038741, Blast_Score=95, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: 2.6.1.- [C]

Molecular weight: Translated: 44314; Mature: 44314

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEFPRMHRLPPYVFAVVGELKMQLRRQNVDIVDMGMGNPDMPTPQHIVEKLNEAAAKGV
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCC
NHRYSVSRGIPNLRKAICEWYMRKFDVYLDPDKEAVVTMGAKEGLSHLALAMLSPGDVVF
CCCCHHHCCCCHHHHHHHHHHHHHCCEEECCCCCEEEEECHHHHHHHHHHHHCCCCCEEE
APDPTYPIHTYAAIIAGADVRRIPIGKGRDFFEDLLAATRQTWPQPKLLMLSYPHNPTTE
CCCCCCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHH
LATLEFFQKVVDFAKEHKMYVVHDMAYADLAFDGYEPPSFMQADGAKDVGVEFYSMSKSY
HHHHHHHHHHHHHHHHCCEEEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCC
SMAGWRVGFCVGNREMVHALTRIKSYLDYGIFQPIQIAATVALNGPEDCVKEIVDTYRQR
CCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHH
RDVLCEGLNRVGWPIEPPKATMFAWAEIPEPFRQMGSVEFSKLLLREAGVAVSPGLGFGH
HHHHHHHHHHCCCCCCCCCCCEEEEHHCCHHHHHHCCHHHHHHHHHHCCCEECCCCCCCC
FGDHHVRFALIENPHRIKQAIKGIKRVLSGSSCG
CCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MYEFPRMHRLPPYVFAVVGELKMQLRRQNVDIVDMGMGNPDMPTPQHIVEKLNEAAAKGV
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCC
NHRYSVSRGIPNLRKAICEWYMRKFDVYLDPDKEAVVTMGAKEGLSHLALAMLSPGDVVF
CCCCHHHCCCCHHHHHHHHHHHHHCCEEECCCCCEEEEECHHHHHHHHHHHHCCCCCEEE
APDPTYPIHTYAAIIAGADVRRIPIGKGRDFFEDLLAATRQTWPQPKLLMLSYPHNPTTE
CCCCCCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHH
LATLEFFQKVVDFAKEHKMYVVHDMAYADLAFDGYEPPSFMQADGAKDVGVEFYSMSKSY
HHHHHHHHHHHHHHHHCCEEEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCC
SMAGWRVGFCVGNREMVHALTRIKSYLDYGIFQPIQIAATVALNGPEDCVKEIVDTYRQR
CCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHH
RDVLCEGLNRVGWPIEPPKATMFAWAEIPEPFRQMGSVEFSKLLLREAGVAVSPGLGFGH
HHHHHHHHHHCCCCCCCCCCCEEEEHHCCHHHHHHCCHHHHHHHHHHCCCEECCCCCCCC
FGDHHVRFALIENPHRIKQAIKGIKRVLSGSSCG
CCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Pyridoxal Phosphate. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]